BLASTX nr result

ID: Coptis23_contig00033378 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00033378
         (429 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002281281.1| PREDICTED: probable FKBP-type peptidyl-proly...   199   2e-49
ref|XP_004143483.1| PREDICTED: peptidyl-prolyl cis-trans isomera...   197   6e-49
gb|AER26535.1| fk506-binding protein [Carica papaya]                  191   5e-47
ref|XP_004162310.1| PREDICTED: peptidyl-prolyl cis-trans isomera...   188   3e-46
gb|ABK96693.1| unknown [Populus trichocarpa x Populus deltoides]      186   2e-45

>ref|XP_002281281.1| PREDICTED: probable FKBP-type peptidyl-prolyl cis-trans isomerase
           4, chloroplastic [Vitis vinifera]
           gi|296082462|emb|CBI21467.3| unnamed protein product
           [Vitis vinifera]
          Length = 206

 Score =  199 bits (506), Expect = 2e-49
 Identities = 103/142 (72%), Positives = 112/142 (78%)
 Frame = +2

Query: 2   PSSSLTPTSSNAPSNSGNKMKFYEFGIGLLAASLVFVMPLEANATRIEYYATVSEKPCEL 181
           PS S  P ++     S  K    + GIGLLAAS+V + PLEA ATRIEYYATV E  CEL
Sbjct: 23  PSLSFKPIANCI---SSTKRPVLDVGIGLLAASVVALSPLEATATRIEYYATVGEPNCEL 79

Query: 182 NFVKTGLGYCDVGVGTGKEATRGELINVHYTARFADGTVFDSSYKRGRPLTMRIGVGKVT 361
           NF K+GLGYCDV VG+G+EA  GELINVHYTARFADGTVFDSSYKR RPLTMRIG GK+ 
Sbjct: 80  NFAKSGLGYCDVAVGSGEEAPFGELINVHYTARFADGTVFDSSYKRARPLTMRIGAGKLI 139

Query: 362 KGLDQGIGGGEGVPPMLVGGKR 427
           KGLDQGI GGEGVPPMLVGGKR
Sbjct: 140 KGLDQGILGGEGVPPMLVGGKR 161


>ref|XP_004143483.1| PREDICTED: peptidyl-prolyl cis-trans isomerase FKBP16-2,
           chloroplastic-like [Cucumis sativus]
          Length = 211

 Score =  197 bits (502), Expect = 6e-49
 Identities = 99/137 (72%), Positives = 111/137 (81%)
 Frame = +2

Query: 17  TPTSSNAPSNSGNKMKFYEFGIGLLAASLVFVMPLEANATRIEYYATVSEKPCELNFVKT 196
           T TSS++ S S  K      GIGLLAAS++ + PL+ANATRIEYYATV E  CE N+V +
Sbjct: 30  TSTSSSSSSVSATKKAISNMGIGLLAASVLALSPLDANATRIEYYATVGEPLCEFNYVPS 89

Query: 197 GLGYCDVGVGTGKEATRGELINVHYTARFADGTVFDSSYKRGRPLTMRIGVGKVTKGLDQ 376
           GLGYCD+ VG+G+E   GELINVHYTARFADG VFDSSYKRGR LTMRIGVGKV +GLDQ
Sbjct: 90  GLGYCDIAVGSGEEVPYGELINVHYTARFADGIVFDSSYKRGRYLTMRIGVGKVIRGLDQ 149

Query: 377 GIGGGEGVPPMLVGGKR 427
           GI GGEGVPPMLVGGKR
Sbjct: 150 GILGGEGVPPMLVGGKR 166


>gb|AER26535.1| fk506-binding protein [Carica papaya]
          Length = 229

 Score =  191 bits (485), Expect = 5e-47
 Identities = 102/158 (64%), Positives = 116/158 (73%), Gaps = 17/158 (10%)
 Frame = +2

Query: 5   SSSLTPTSSNAPSNS----GNKMKF-------------YEFGIGLLAASLVFVMPLEANA 133
           S SL P S + PS+S    GN++               ++ GIGLLAAS++   PL+A+A
Sbjct: 27  SCSLLPCSCSLPSSSPDANGNQLNLKPASNKFAVKKCIFDSGIGLLAASVLAWSPLDADA 86

Query: 134 TRIEYYATVSEKPCELNFVKTGLGYCDVGVGTGKEATRGELINVHYTARFADGTVFDSSY 313
           TRIEYYATV E  CE NF  +GLGYCDV VG G+EA RGELINVHYTARFADGTVFDSSY
Sbjct: 87  TRIEYYATVGEPLCEFNFAPSGLGYCDVHVGAGQEAPRGELINVHYTARFADGTVFDSSY 146

Query: 314 KRGRPLTMRIGVGKVTKGLDQGIGGGEGVPPMLVGGKR 427
           KR RPLTMRIGVGKV KGLDQGI GG+GV PM +GGKR
Sbjct: 147 KRARPLTMRIGVGKVIKGLDQGILGGDGVSPMHIGGKR 184


>ref|XP_004162310.1| PREDICTED: peptidyl-prolyl cis-trans isomerase FKBP16-2,
           chloroplastic-like [Cucumis sativus]
          Length = 163

 Score =  188 bits (478), Expect = 3e-46
 Identities = 92/117 (78%), Positives = 102/117 (87%)
 Frame = +2

Query: 77  GIGLLAASLVFVMPLEANATRIEYYATVSEKPCELNFVKTGLGYCDVGVGTGKEATRGEL 256
           GIGLLAAS++ + PL+ANATRIEYYATV E  CE N+V +GLGYCD+ VG+G+E   GEL
Sbjct: 2   GIGLLAASVLALSPLDANATRIEYYATVGEPLCEFNYVPSGLGYCDIAVGSGEEVPYGEL 61

Query: 257 INVHYTARFADGTVFDSSYKRGRPLTMRIGVGKVTKGLDQGIGGGEGVPPMLVGGKR 427
           INVHYTARFADG VFDSSYKRGR LTMRIGVGKV +GLDQGI GGEGVPPMLVGGKR
Sbjct: 62  INVHYTARFADGIVFDSSYKRGRYLTMRIGVGKVIRGLDQGILGGEGVPPMLVGGKR 118


>gb|ABK96693.1| unknown [Populus trichocarpa x Populus deltoides]
          Length = 226

 Score =  186 bits (472), Expect = 2e-45
 Identities = 92/135 (68%), Positives = 107/135 (79%)
 Frame = +2

Query: 23  TSSNAPSNSGNKMKFYEFGIGLLAASLVFVMPLEANATRIEYYATVSEKPCELNFVKTGL 202
           T+ +  S S  K    + G+GLLAAS++   PL+A ATRIEYYATV++ PC+LNFV +GL
Sbjct: 43  TNLSLKSVSKTKKCILDVGLGLLAASVLAFSPLDAEATRIEYYATVADPPCDLNFVPSGL 102

Query: 203 GYCDVGVGTGKEATRGELINVHYTARFADGTVFDSSYKRGRPLTMRIGVGKVTKGLDQGI 382
           GYCD+ VG G +A   ELINVHYTARFADG VFDSSYKRGRPLTMRIGVGKV +GLDQGI
Sbjct: 103 GYCDISVGPGVDAPYNELINVHYTARFADGRVFDSSYKRGRPLTMRIGVGKVIRGLDQGI 162

Query: 383 GGGEGVPPMLVGGKR 427
            GGEGVPPM  GG+R
Sbjct: 163 LGGEGVPPMQEGGRR 177


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