BLASTX nr result
ID: Coptis23_contig00033363
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Coptis23_contig00033363 (219 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value gb|AAW83328.1| mitochondrial prohibitin 1 [Petunia x hybrida] 81 1e-13 gb|AEJ08743.1| RSI1 [Solanum tuberosum] 80 1e-13 ref|XP_002323792.1| predicted protein [Populus trichocarpa] gi|2... 80 1e-13 ref|XP_003527554.1| PREDICTED: prohibitin-1, mitochondrial-like ... 80 2e-13 ref|XP_003522886.1| PREDICTED: prohibitin-1, mitochondrial-like ... 79 4e-13 >gb|AAW83328.1| mitochondrial prohibitin 1 [Petunia x hybrida] Length = 279 Score = 80.9 bits (198), Expect = 1e-13 Identities = 40/63 (63%), Positives = 46/63 (73%) Frame = -1 Query: 189 MANNQAAIKFLNNXXXXXXXXXXXXXXVNSSLYTVDGGQRAVLFDRFRGILENTVGEGTH 10 M +NQAA+ FL N VNSSLYTVDGGQRAVLFDRFRG++++TVGEGTH Sbjct: 1 MGSNQAAVSFLTNLARAAFGLGISATVVNSSLYTVDGGQRAVLFDRFRGVIDDTVGEGTH 60 Query: 9 FLI 1 FLI Sbjct: 61 FLI 63 >gb|AEJ08743.1| RSI1 [Solanum tuberosum] Length = 279 Score = 80.5 bits (197), Expect = 1e-13 Identities = 38/63 (60%), Positives = 46/63 (73%) Frame = -1 Query: 189 MANNQAAIKFLNNXXXXXXXXXXXXXXVNSSLYTVDGGQRAVLFDRFRGILENTVGEGTH 10 M +NQAA+ FL N +NSSLYTVDGGQRAVLFDRFRG++++TVGEGTH Sbjct: 1 MGSNQAAVSFLTNIARAAFGLGIGATVLNSSLYTVDGGQRAVLFDRFRGVIDDTVGEGTH 60 Query: 9 FLI 1 FL+ Sbjct: 61 FLV 63 >ref|XP_002323792.1| predicted protein [Populus trichocarpa] gi|222866794|gb|EEF03925.1| predicted protein [Populus trichocarpa] Length = 279 Score = 80.5 bits (197), Expect = 1e-13 Identities = 38/63 (60%), Positives = 46/63 (73%) Frame = -1 Query: 189 MANNQAAIKFLNNXXXXXXXXXXXXXXVNSSLYTVDGGQRAVLFDRFRGILENTVGEGTH 10 M ++QAA+ FLNN +NSSLYTVDGGQRAVLFDRFRG+++ T+GEGTH Sbjct: 1 MGSSQAAVSFLNNLARAAFGIGAAATVLNSSLYTVDGGQRAVLFDRFRGVIDTTIGEGTH 60 Query: 9 FLI 1 FLI Sbjct: 61 FLI 63 >ref|XP_003527554.1| PREDICTED: prohibitin-1, mitochondrial-like [Glycine max] Length = 279 Score = 80.1 bits (196), Expect = 2e-13 Identities = 40/63 (63%), Positives = 46/63 (73%) Frame = -1 Query: 189 MANNQAAIKFLNNXXXXXXXXXXXXXXVNSSLYTVDGGQRAVLFDRFRGILENTVGEGTH 10 M +NQAAI FL N ++SSLYTVDGGQRAVLFDRFRGIL++TVGEGTH Sbjct: 1 MGSNQAAISFLTNVARAAFGLGAAATALSSSLYTVDGGQRAVLFDRFRGILDSTVGEGTH 60 Query: 9 FLI 1 FL+ Sbjct: 61 FLV 63 >ref|XP_003522886.1| PREDICTED: prohibitin-1, mitochondrial-like isoform 1 [Glycine max] gi|356508282|ref|XP_003522887.1| PREDICTED: prohibitin-1, mitochondrial-like isoform 2 [Glycine max] Length = 279 Score = 79.0 bits (193), Expect = 4e-13 Identities = 41/63 (65%), Positives = 45/63 (71%) Frame = -1 Query: 189 MANNQAAIKFLNNXXXXXXXXXXXXXXVNSSLYTVDGGQRAVLFDRFRGILENTVGEGTH 10 M N+AAI FL N V+SSLYTVDGGQRAVLFDRFRGIL++TVGEGTH Sbjct: 1 MGRNEAAISFLTNVARTAFGLGAAATAVSSSLYTVDGGQRAVLFDRFRGILDSTVGEGTH 60 Query: 9 FLI 1 FLI Sbjct: 61 FLI 63