BLASTX nr result

ID: Coptis23_contig00033363 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00033363
         (219 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AAW83328.1| mitochondrial prohibitin 1 [Petunia x hybrida]          81   1e-13
gb|AEJ08743.1| RSI1 [Solanum tuberosum]                                80   1e-13
ref|XP_002323792.1| predicted protein [Populus trichocarpa] gi|2...    80   1e-13
ref|XP_003527554.1| PREDICTED: prohibitin-1, mitochondrial-like ...    80   2e-13
ref|XP_003522886.1| PREDICTED: prohibitin-1, mitochondrial-like ...    79   4e-13

>gb|AAW83328.1| mitochondrial prohibitin 1 [Petunia x hybrida]
          Length = 279

 Score = 80.9 bits (198), Expect = 1e-13
 Identities = 40/63 (63%), Positives = 46/63 (73%)
 Frame = -1

Query: 189 MANNQAAIKFLNNXXXXXXXXXXXXXXVNSSLYTVDGGQRAVLFDRFRGILENTVGEGTH 10
           M +NQAA+ FL N              VNSSLYTVDGGQRAVLFDRFRG++++TVGEGTH
Sbjct: 1   MGSNQAAVSFLTNLARAAFGLGISATVVNSSLYTVDGGQRAVLFDRFRGVIDDTVGEGTH 60

Query: 9   FLI 1
           FLI
Sbjct: 61  FLI 63


>gb|AEJ08743.1| RSI1 [Solanum tuberosum]
          Length = 279

 Score = 80.5 bits (197), Expect = 1e-13
 Identities = 38/63 (60%), Positives = 46/63 (73%)
 Frame = -1

Query: 189 MANNQAAIKFLNNXXXXXXXXXXXXXXVNSSLYTVDGGQRAVLFDRFRGILENTVGEGTH 10
           M +NQAA+ FL N              +NSSLYTVDGGQRAVLFDRFRG++++TVGEGTH
Sbjct: 1   MGSNQAAVSFLTNIARAAFGLGIGATVLNSSLYTVDGGQRAVLFDRFRGVIDDTVGEGTH 60

Query: 9   FLI 1
           FL+
Sbjct: 61  FLV 63


>ref|XP_002323792.1| predicted protein [Populus trichocarpa] gi|222866794|gb|EEF03925.1|
           predicted protein [Populus trichocarpa]
          Length = 279

 Score = 80.5 bits (197), Expect = 1e-13
 Identities = 38/63 (60%), Positives = 46/63 (73%)
 Frame = -1

Query: 189 MANNQAAIKFLNNXXXXXXXXXXXXXXVNSSLYTVDGGQRAVLFDRFRGILENTVGEGTH 10
           M ++QAA+ FLNN              +NSSLYTVDGGQRAVLFDRFRG+++ T+GEGTH
Sbjct: 1   MGSSQAAVSFLNNLARAAFGIGAAATVLNSSLYTVDGGQRAVLFDRFRGVIDTTIGEGTH 60

Query: 9   FLI 1
           FLI
Sbjct: 61  FLI 63


>ref|XP_003527554.1| PREDICTED: prohibitin-1, mitochondrial-like [Glycine max]
          Length = 279

 Score = 80.1 bits (196), Expect = 2e-13
 Identities = 40/63 (63%), Positives = 46/63 (73%)
 Frame = -1

Query: 189 MANNQAAIKFLNNXXXXXXXXXXXXXXVNSSLYTVDGGQRAVLFDRFRGILENTVGEGTH 10
           M +NQAAI FL N              ++SSLYTVDGGQRAVLFDRFRGIL++TVGEGTH
Sbjct: 1   MGSNQAAISFLTNVARAAFGLGAAATALSSSLYTVDGGQRAVLFDRFRGILDSTVGEGTH 60

Query: 9   FLI 1
           FL+
Sbjct: 61  FLV 63


>ref|XP_003522886.1| PREDICTED: prohibitin-1, mitochondrial-like isoform 1 [Glycine max]
           gi|356508282|ref|XP_003522887.1| PREDICTED:
           prohibitin-1, mitochondrial-like isoform 2 [Glycine max]
          Length = 279

 Score = 79.0 bits (193), Expect = 4e-13
 Identities = 41/63 (65%), Positives = 45/63 (71%)
 Frame = -1

Query: 189 MANNQAAIKFLNNXXXXXXXXXXXXXXVNSSLYTVDGGQRAVLFDRFRGILENTVGEGTH 10
           M  N+AAI FL N              V+SSLYTVDGGQRAVLFDRFRGIL++TVGEGTH
Sbjct: 1   MGRNEAAISFLTNVARTAFGLGAAATAVSSSLYTVDGGQRAVLFDRFRGILDSTVGEGTH 60

Query: 9   FLI 1
           FLI
Sbjct: 61  FLI 63


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