BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00033354
         (296 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAN69116.1| hypothetical protein VITISV_031843 [Vitis vinifera]    61   8e-08
ref|XP_002284795.1| PREDICTED: F-box protein SKIP23-like [Vitis ...    60   2e-07
ref|XP_002528337.1| conserved hypothetical protein [Ricinus comm...    60   2e-07
ref|XP_002528428.1| conserved hypothetical protein [Ricinus comm...    60   2e-07
ref|XP_002510618.1| ubiquitin-protein ligase, putative [Ricinus ...    58   7e-07

>emb|CAN69116.1| hypothetical protein VITISV_031843 [Vitis vinifera]
          Length = 389

 Score = 61.2 bits (147), Expect = 8e-08
 Identities = 37/97 (38%), Positives = 56/97 (57%), Gaps = 4/97 (4%)
 Frame = -2

Query: 283 PKVSVI-LPKQKRGGVV*LVKASIS*YHLGTYCKFRGGGKRDES---HHTYRFEVFKLDT 116
           P+VS+I +P+Q  G +  LV++      +  Y       + D++   + T RF+V +LD+
Sbjct: 238 PRVSIIEMPQQFGGDLQYLVESGEELLLVTRYLDLTYDVEXDQTSLIYRTTRFQVCRLDS 297

Query: 115 TQAEWVEVKNLGGHVLFLGQNTSMSLSASDFPGCKLN 5
               W  V +LG   LFLG+N S+SLS+ DFPGCK N
Sbjct: 298 KAPRWEVVSSLGDRALFLGENLSLSLSSVDFPGCKGN 334


>ref|XP_002284795.1| PREDICTED: F-box protein SKIP23-like [Vitis vinifera]
          Length = 389

 Score = 60.1 bits (144), Expect = 2e-07
 Identities = 37/97 (38%), Positives = 55/97 (56%), Gaps = 4/97 (4%)
 Frame = -2

Query: 283 PKVSVI-LPKQKRGGVV*LVKASIS*YHLGTYCKFRGGGKRDES---HHTYRFEVFKLDT 116
           P+VS+I +P+Q  G +  LV++      +  Y       + D++   + T RF+V +LD 
Sbjct: 238 PRVSIIEMPQQFGGDLQYLVESGEELLLVTRYLDLTYDVEPDQTSLIYRTTRFQVCRLDL 297

Query: 115 TQAEWVEVKNLGGHVLFLGQNTSMSLSASDFPGCKLN 5
               W  V +LG   LFLG+N S+SLS+ DFPGCK N
Sbjct: 298 KAPRWEVVSSLGDRALFLGENLSLSLSSVDFPGCKGN 334


>ref|XP_002528337.1| conserved hypothetical protein [Ricinus communis]
           gi|223532205|gb|EEF34009.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 102

 Score = 60.1 bits (144), Expect = 2e-07
 Identities = 27/46 (58%), Positives = 34/46 (73%)
 Frame = -2

Query: 139 FEVFKLDTTQAEWVEVKNLGGHVLFLGQNTSMSLSASDFPGCKLNS 2
           F V++LD+++  WVEV++L   VLFLG N SMSLSA DF GC  NS
Sbjct: 2   FHVYRLDSSEQNWVEVESLNNQVLFLGMNHSMSLSAQDFSGCDRNS 47


>ref|XP_002528428.1| conserved hypothetical protein [Ricinus communis]
           gi|223532164|gb|EEF33970.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 339

 Score = 59.7 bits (143), Expect = 2e-07
 Identities = 28/51 (54%), Positives = 34/51 (66%)
 Frame = -2

Query: 157 SHHTYRFEVFKLDTTQAEWVEVKNLGGHVLFLGQNTSMSLSASDFPGCKLN 5
           S  T RF+VFKLD     W+EVK+LG  VLFLG +++ S S SD  GCK N
Sbjct: 224 SERTVRFKVFKLDKEAQTWIEVKSLGDRVLFLGDDSTFSASVSDLSGCKGN 274


>ref|XP_002510618.1| ubiquitin-protein ligase, putative [Ricinus communis]
           gi|223551319|gb|EEF52805.1| ubiquitin-protein ligase,
           putative [Ricinus communis]
          Length = 398

 Score = 58.2 bits (139), Expect = 7e-07
 Identities = 25/50 (50%), Positives = 35/50 (70%)
 Frame = -2

Query: 154 HHTYRFEVFKLDTTQAEWVEVKNLGGHVLFLGQNTSMSLSASDFPGCKLN 5
           + T RFEVF+LD    +W+ +  LG   LF+G+N+S+SLSA+DF GC  N
Sbjct: 290 YRTIRFEVFRLDWNGPQWLRMSTLGDKALFIGENSSLSLSATDFSGCMGN 339