BLASTX nr result

ID: Coptis23_contig00033343 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00033343
         (441 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003633983.1| PREDICTED: uncharacterized protein LOC100255...   134   1e-29
emb|CBI40499.3| unnamed protein product [Vitis vinifera]              134   1e-29
ref|XP_003612481.1| Chitinase domain-containing protein [Medicag...   130   9e-29
gb|AAM91562.1| unknown protein [Arabidopsis thaliana] gi|2508371...   124   1e-26
ref|NP_192013.1| glycosyl hydrolase family 18 protein [Arabidops...   124   1e-26

>ref|XP_003633983.1| PREDICTED: uncharacterized protein LOC100255153 [Vitis vinifera]
          Length = 892

 Score =  134 bits (336), Expect = 1e-29
 Identities = 63/97 (64%), Positives = 77/97 (79%), Gaps = 2/97 (2%)
 Frame = +1

Query: 157 RMKYXXXXXXXLS--VYKRGLVKPITNYQETLTENFKVSENTSRPHYTYPVLAYITPWNS 330
           R++Y       LS  V+++GLVK   NYQE LTEN KVS+N S+ HYTYPVLAYITPWN+
Sbjct: 59  RIRYAPRTNRALSSYVHQQGLVKADVNYQEILTENSKVSKNMSQRHYTYPVLAYITPWNN 118

Query: 331 LGYELAKRFNSKFTHLSPVWYDLKSDGADIVLDGRHN 441
            GY+LAK FNSKFTHLSP+WYDL+S G ++VL+GRHN
Sbjct: 119 KGYDLAKSFNSKFTHLSPIWYDLRSQGTNLVLEGRHN 155


>emb|CBI40499.3| unnamed protein product [Vitis vinifera]
          Length = 435

 Score =  134 bits (336), Expect = 1e-29
 Identities = 63/97 (64%), Positives = 77/97 (79%), Gaps = 2/97 (2%)
 Frame = +1

Query: 157 RMKYXXXXXXXLS--VYKRGLVKPITNYQETLTENFKVSENTSRPHYTYPVLAYITPWNS 330
           R++Y       LS  V+++GLVK   NYQE LTEN KVS+N S+ HYTYPVLAYITPWN+
Sbjct: 59  RIRYAPRTNRALSSYVHQQGLVKADVNYQEILTENSKVSKNMSQRHYTYPVLAYITPWNN 118

Query: 331 LGYELAKRFNSKFTHLSPVWYDLKSDGADIVLDGRHN 441
            GY+LAK FNSKFTHLSP+WYDL+S G ++VL+GRHN
Sbjct: 119 KGYDLAKSFNSKFTHLSPIWYDLRSQGTNLVLEGRHN 155


>ref|XP_003612481.1| Chitinase domain-containing protein [Medicago truncatula]
           gi|355513816|gb|AES95439.1| Chitinase domain-containing
           protein [Medicago truncatula]
          Length = 442

 Score =  130 bits (328), Expect = 9e-29
 Identities = 60/83 (72%), Positives = 67/83 (80%)
 Frame = +1

Query: 193 SVYKRGLVKPITNYQETLTENFKVSENTSRPHYTYPVLAYITPWNSLGYELAKRFNSKFT 372
           +VY+RGLV   TNYQ+ LTEN KVSEN     Y YPVL Y+TPWNS GYE+AKRFNSKFT
Sbjct: 72  NVYQRGLVTTDTNYQDILTENVKVSENAFTRRYDYPVLGYVTPWNSHGYEMAKRFNSKFT 131

Query: 373 HLSPVWYDLKSDGADIVLDGRHN 441
           HLSPVWYDLKS   D+VL+GRHN
Sbjct: 132 HLSPVWYDLKSQQTDLVLEGRHN 154


>gb|AAM91562.1| unknown protein [Arabidopsis thaliana] gi|25083713|gb|AAN72108.1|
           unknown protein [Arabidopsis thaliana]
          Length = 278

 Score =  124 bits (310), Expect = 1e-26
 Identities = 57/83 (68%), Positives = 70/83 (84%)
 Frame = +1

Query: 193 SVYKRGLVKPITNYQETLTENFKVSENTSRPHYTYPVLAYITPWNSLGYELAKRFNSKFT 372
           S+ ++G+VK   N+QE LTE+ K SEN++R HY YPVLAYITPWNS GY++AK FNSKFT
Sbjct: 68  SIRQKGIVKTDINFQEILTEHSKASENSTR-HYDYPVLAYITPWNSKGYDMAKIFNSKFT 126

Query: 373 HLSPVWYDLKSDGADIVLDGRHN 441
           HLSPVWYDLKS G+ +VL+GRHN
Sbjct: 127 HLSPVWYDLKSQGSGLVLEGRHN 149


>ref|NP_192013.1| glycosyl hydrolase family 18 protein [Arabidopsis thaliana]
           gi|7267601|emb|CAB80913.1| hypothetical protein
           [Arabidopsis thaliana] gi|332656572|gb|AEE81972.1|
           glycosyl hydrolase family 18 protein [Arabidopsis
           thaliana]
          Length = 430

 Score =  124 bits (310), Expect = 1e-26
 Identities = 57/83 (68%), Positives = 70/83 (84%)
 Frame = +1

Query: 193 SVYKRGLVKPITNYQETLTENFKVSENTSRPHYTYPVLAYITPWNSLGYELAKRFNSKFT 372
           S+ ++G+VK   N+QE LTE+ K SEN++R HY YPVLAYITPWNS GY++AK FNSKFT
Sbjct: 68  SIRQKGIVKTDINFQEILTEHSKASENSTR-HYDYPVLAYITPWNSKGYDMAKIFNSKFT 126

Query: 373 HLSPVWYDLKSDGADIVLDGRHN 441
           HLSPVWYDLKS G+ +VL+GRHN
Sbjct: 127 HLSPVWYDLKSQGSGLVLEGRHN 149


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