BLASTX nr result

ID: Coptis23_contig00033337 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00033337
         (297 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002279361.1| PREDICTED: UPF0202 protein At1g10490 [Vitis ...   142   4e-32
ref|XP_002440325.1| hypothetical protein SORBIDRAFT_09g029740 [S...   140   1e-31
ref|XP_004164945.1| PREDICTED: LOW QUALITY PROTEIN: UPF0202 prot...   140   1e-31
ref|XP_004141967.1| PREDICTED: UPF0202 protein At1g10490-like [C...   140   1e-31
ref|XP_003569213.1| PREDICTED: UPF0202 protein At1g10490-like [B...   138   4e-31

>ref|XP_002279361.1| PREDICTED: UPF0202 protein At1g10490 [Vitis vinifera]
           gi|296082521|emb|CBI21526.3| unnamed protein product
           [Vitis vinifera]
          Length = 1032

 Score =  142 bits (357), Expect = 4e-32
 Identities = 65/89 (73%), Positives = 81/89 (91%)
 Frame = +2

Query: 26  KVDPRITDLIKNGVEKRHRSMFVIIGDKSRDQIVNLHHLLTKAMMKSRPSILWCYKNKLD 205
           KVD RI  LI+NGV+ RHRSMFVIIGDKSRDQIVNLH++L+KA++KSRP++LWCYK+KL+
Sbjct: 4   KVDERIRTLIENGVKTRHRSMFVIIGDKSRDQIVNLHYMLSKAVIKSRPTVLWCYKDKLE 63

Query: 206 ISSHRKKRGKQMKKLMRNGLLEQEKADPF 292
           +SSH+KKR KQ+KKLM+ GLL+ EK DPF
Sbjct: 64  LSSHKKKRAKQVKKLMQRGLLDPEKVDPF 92


>ref|XP_002440325.1| hypothetical protein SORBIDRAFT_09g029740 [Sorghum bicolor]
           gi|241945610|gb|EES18755.1| hypothetical protein
           SORBIDRAFT_09g029740 [Sorghum bicolor]
          Length = 1024

 Score =  140 bits (353), Expect = 1e-31
 Identities = 65/89 (73%), Positives = 81/89 (91%)
 Frame = +2

Query: 26  KVDPRITDLIKNGVEKRHRSMFVIIGDKSRDQIVNLHHLLTKAMMKSRPSILWCYKNKLD 205
           KVD RI  LI+NGV +R RSMFVI+GDKSRDQIVNL+++LTK+ +KSRPS+LWCY++KL+
Sbjct: 4   KVDERIRTLIENGVRQRQRSMFVIVGDKSRDQIVNLNYMLTKSRVKSRPSVLWCYRDKLE 63

Query: 206 ISSHRKKRGKQMKKLMRNGLLEQEKADPF 292
           ISSH+KKRGKQ+KKLM+ GLL+ EKADPF
Sbjct: 64  ISSHKKKRGKQIKKLMQRGLLDPEKADPF 92


>ref|XP_004164945.1| PREDICTED: LOW QUALITY PROTEIN: UPF0202 protein At1g10490-like
           [Cucumis sativus]
          Length = 1030

 Score =  140 bits (352), Expect = 1e-31
 Identities = 64/89 (71%), Positives = 80/89 (89%)
 Frame = +2

Query: 26  KVDPRITDLIKNGVEKRHRSMFVIIGDKSRDQIVNLHHLLTKAMMKSRPSILWCYKNKLD 205
           KVD RI  LI+NGV+ RHRS+FVIIGDKSRDQIVNLH++L+KA +KSRP++LWCY++KL+
Sbjct: 4   KVDERIRTLIENGVKSRHRSIFVIIGDKSRDQIVNLHYMLSKATIKSRPNVLWCYRDKLE 63

Query: 206 ISSHRKKRGKQMKKLMRNGLLEQEKADPF 292
           +SSHRKKR KQ+KKLM+ GLL+ EK DPF
Sbjct: 64  LSSHRKKRAKQVKKLMQRGLLDPEKVDPF 92


>ref|XP_004141967.1| PREDICTED: UPF0202 protein At1g10490-like [Cucumis sativus]
          Length = 1030

 Score =  140 bits (352), Expect = 1e-31
 Identities = 64/89 (71%), Positives = 80/89 (89%)
 Frame = +2

Query: 26  KVDPRITDLIKNGVEKRHRSMFVIIGDKSRDQIVNLHHLLTKAMMKSRPSILWCYKNKLD 205
           KVD RI  LI+NGV+ RHRS+FVIIGDKSRDQIVNLH++L+KA +KSRP++LWCY++KL+
Sbjct: 4   KVDERIRTLIENGVKSRHRSIFVIIGDKSRDQIVNLHYMLSKATIKSRPNVLWCYRDKLE 63

Query: 206 ISSHRKKRGKQMKKLMRNGLLEQEKADPF 292
           +SSHRKKR KQ+KKLM+ GLL+ EK DPF
Sbjct: 64  LSSHRKKRAKQVKKLMQRGLLDPEKVDPF 92


>ref|XP_003569213.1| PREDICTED: UPF0202 protein At1g10490-like [Brachypodium distachyon]
          Length = 1025

 Score =  138 bits (348), Expect = 4e-31
 Identities = 63/89 (70%), Positives = 80/89 (89%)
 Frame = +2

Query: 26  KVDPRITDLIKNGVEKRHRSMFVIIGDKSRDQIVNLHHLLTKAMMKSRPSILWCYKNKLD 205
           KVD RI  LI+NGV +R RSMF+I+GDKSRDQIVNL+++L+K+ +KSRPS+LWCY+NKL+
Sbjct: 4   KVDERIRTLIENGVRQRQRSMFIIVGDKSRDQIVNLNYMLSKSRVKSRPSVLWCYRNKLE 63

Query: 206 ISSHRKKRGKQMKKLMRNGLLEQEKADPF 292
           ISSHRKKR KQ+KKLM+ GL++ EKADPF
Sbjct: 64  ISSHRKKRAKQIKKLMQRGLMDPEKADPF 92


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