BLASTX nr result

ID: Coptis23_contig00033331 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00033331
         (221 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|NP_683599.1| ABC transporter B family member 22 [Arabidopsis...   106   2e-21
dbj|BAB02858.1| multidrug resistance p-glycoprotein; ABC transpo...   106   2e-21
sp|Q9LSJ2.2|AB22B_ARATH RecName: Full=ABC transporter B family m...   106   2e-21
ref|XP_002453447.1| hypothetical protein SORBIDRAFT_04g006100 [S...   106   2e-21
gb|AFW66244.1| hypothetical protein ZEAMMB73_446753 [Zea mays]        105   3e-21

>ref|NP_683599.1| ABC transporter B family member 22 [Arabidopsis thaliana]
           gi|332643921|gb|AEE77442.1| ABC transporter B family
           member 22 [Arabidopsis thaliana]
          Length = 1221

 Score =  106 bits (264), Expect = 2e-21
 Identities = 52/63 (82%), Positives = 56/63 (88%)
 Frame = -3

Query: 219 QEPVLFAISINENILFGKEDATFEEVVAATKSSNAYDFISQFPQGYDTQVGERGVQVSGG 40
           QEP LFA SI ENILFGKEDA+F+EVV A KSSNA+DFISQFP GY TQVGERGVQ+SGG
Sbjct: 421 QEPALFATSIEENILFGKEDASFDEVVEAAKSSNAHDFISQFPLGYKTQVGERGVQMSGG 480

Query: 39  QKQ 31
           QKQ
Sbjct: 481 QKQ 483



 Score = 70.5 bits (171), Expect = 1e-10
 Identities = 34/65 (52%), Positives = 46/65 (70%), Gaps = 2/65 (3%)
 Frame = -3

Query: 219  QEPVLFAISINENILFGKEDATFEE--VVAATKSSNAYDFISQFPQGYDTQVGERGVQVS 46
            QEP+LFA +I ENI++G      +E  ++ A K++NA+DFI     GYDT  G+RGVQ+S
Sbjct: 1059 QEPILFAGTIRENIMYGGASDKIDESEIIEAAKAANAHDFIVTLSDGYDTYCGDRGVQLS 1118

Query: 45   GGQKQ 31
            GGQKQ
Sbjct: 1119 GGQKQ 1123


>dbj|BAB02858.1| multidrug resistance p-glycoprotein; ABC transporter-like protein
           [Arabidopsis thaliana]
          Length = 1262

 Score =  106 bits (264), Expect = 2e-21
 Identities = 52/63 (82%), Positives = 56/63 (88%)
 Frame = -3

Query: 219 QEPVLFAISINENILFGKEDATFEEVVAATKSSNAYDFISQFPQGYDTQVGERGVQVSGG 40
           QEP LFA SI ENILFGKEDA+F+EVV A KSSNA+DFISQFP GY TQVGERGVQ+SGG
Sbjct: 462 QEPALFATSIEENILFGKEDASFDEVVEAAKSSNAHDFISQFPLGYKTQVGERGVQMSGG 521

Query: 39  QKQ 31
           QKQ
Sbjct: 522 QKQ 524



 Score = 70.5 bits (171), Expect = 1e-10
 Identities = 34/65 (52%), Positives = 46/65 (70%), Gaps = 2/65 (3%)
 Frame = -3

Query: 219  QEPVLFAISINENILFGKEDATFEE--VVAATKSSNAYDFISQFPQGYDTQVGERGVQVS 46
            QEP+LFA +I ENI++G      +E  ++ A K++NA+DFI     GYDT  G+RGVQ+S
Sbjct: 1100 QEPILFAGTIRENIMYGGASDKIDESEIIEAAKAANAHDFIVTLSDGYDTYCGDRGVQLS 1159

Query: 45   GGQKQ 31
            GGQKQ
Sbjct: 1160 GGQKQ 1164


>sp|Q9LSJ2.2|AB22B_ARATH RecName: Full=ABC transporter B family member 22; Short=ABC
           transporter ABCB.22; Short=AtABCB22; AltName:
           Full=P-glycoprotein 22; AltName: Full=Putative multidrug
           resistance protein 21
          Length = 1229

 Score =  106 bits (264), Expect = 2e-21
 Identities = 52/63 (82%), Positives = 56/63 (88%)
 Frame = -3

Query: 219 QEPVLFAISINENILFGKEDATFEEVVAATKSSNAYDFISQFPQGYDTQVGERGVQVSGG 40
           QEP LFA SI ENILFGKEDA+F+EVV A KSSNA+DFISQFP GY TQVGERGVQ+SGG
Sbjct: 429 QEPALFATSIEENILFGKEDASFDEVVEAAKSSNAHDFISQFPLGYKTQVGERGVQMSGG 488

Query: 39  QKQ 31
           QKQ
Sbjct: 489 QKQ 491



 Score = 70.5 bits (171), Expect = 1e-10
 Identities = 34/65 (52%), Positives = 46/65 (70%), Gaps = 2/65 (3%)
 Frame = -3

Query: 219  QEPVLFAISINENILFGKEDATFEE--VVAATKSSNAYDFISQFPQGYDTQVGERGVQVS 46
            QEP+LFA +I ENI++G      +E  ++ A K++NA+DFI     GYDT  G+RGVQ+S
Sbjct: 1067 QEPILFAGTIRENIMYGGASDKIDESEIIEAAKAANAHDFIVTLSDGYDTYCGDRGVQLS 1126

Query: 45   GGQKQ 31
            GGQKQ
Sbjct: 1127 GGQKQ 1131


>ref|XP_002453447.1| hypothetical protein SORBIDRAFT_04g006100 [Sorghum bicolor]
           gi|241933278|gb|EES06423.1| hypothetical protein
           SORBIDRAFT_04g006100 [Sorghum bicolor]
          Length = 1236

 Score =  106 bits (264), Expect = 2e-21
 Identities = 52/63 (82%), Positives = 57/63 (90%)
 Frame = -3

Query: 219 QEPVLFAISINENILFGKEDATFEEVVAATKSSNAYDFISQFPQGYDTQVGERGVQVSGG 40
           QEP LFA SI ENILFGKEDAT EEVVAA K++NA++FISQ PQGYDTQVGERGVQ+SGG
Sbjct: 436 QEPALFATSIRENILFGKEDATEEEVVAAAKAANAHNFISQLPQGYDTQVGERGVQMSGG 495

Query: 39  QKQ 31
           QKQ
Sbjct: 496 QKQ 498



 Score = 79.7 bits (195), Expect = 2e-13
 Identities = 39/63 (61%), Positives = 47/63 (74%)
 Frame = -3

Query: 219  QEPVLFAISINENILFGKEDATFEEVVAATKSSNAYDFISQFPQGYDTQVGERGVQVSGG 40
            QEP LFA +I ENI++G E AT  E+  A +S+NA+DFIS    GYDT  GERGVQ+SGG
Sbjct: 1074 QEPTLFAGTIRENIVYGTETATEAEIENAARSANAHDFISNLKDGYDTWCGERGVQLSGG 1133

Query: 39   QKQ 31
            QKQ
Sbjct: 1134 QKQ 1136


>gb|AFW66244.1| hypothetical protein ZEAMMB73_446753 [Zea mays]
          Length = 806

 Score =  105 bits (263), Expect = 3e-21
 Identities = 51/63 (80%), Positives = 57/63 (90%)
 Frame = -3

Query: 219 QEPVLFAISINENILFGKEDATFEEVVAATKSSNAYDFISQFPQGYDTQVGERGVQVSGG 40
           QEP LFA SI ENILFGKEDAT EE+VAA K++NA++FISQ PQGYDTQVGERGVQ+SGG
Sbjct: 6   QEPALFATSIRENILFGKEDATGEEIVAAAKAANAHNFISQLPQGYDTQVGERGVQMSGG 65

Query: 39  QKQ 31
           QKQ
Sbjct: 66  QKQ 68



 Score = 79.7 bits (195), Expect = 2e-13
 Identities = 39/63 (61%), Positives = 47/63 (74%)
 Frame = -3

Query: 219 QEPVLFAISINENILFGKEDATFEEVVAATKSSNAYDFISQFPQGYDTQVGERGVQVSGG 40
           QEP LFA +I ENI++G E AT  E+  A +S+NA+DFIS    GYDT  GERGVQ+SGG
Sbjct: 644 QEPTLFAGTIRENIVYGTETATEAEIENAARSANAHDFISNLKDGYDTWCGERGVQLSGG 703

Query: 39  QKQ 31
           QKQ
Sbjct: 704 QKQ 706


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