BLASTX nr result

ID: Coptis23_contig00033330 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00033330
         (378 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002266194.1| PREDICTED: GDSL esterase/lipase At1g71250 [V...   102   4e-20
ref|XP_002887358.1| predicted protein [Arabidopsis lyrata subsp....    96   2e-18
ref|XP_002329215.1| predicted protein [Populus trichocarpa] gi|2...    96   2e-18
ref|XP_002521611.1| zinc finger protein, putative [Ricinus commu...    96   4e-18
ref|XP_002518038.1| zinc finger protein, putative [Ricinus commu...    95   5e-18

>ref|XP_002266194.1| PREDICTED: GDSL esterase/lipase At1g71250 [Vitis vinifera]
           gi|297734752|emb|CBI16986.3| unnamed protein product
           [Vitis vinifera]
          Length = 363

 Score =  102 bits (253), Expect = 4e-20
 Identities = 55/125 (44%), Positives = 82/125 (65%), Gaps = 1/125 (0%)
 Frame = -3

Query: 376 PSTIGSNIMQGVNFASSSAGILNDTGFHIGQNFPLFQQVQNFGENILPELKSPTLNSDTT 197
           P + GS I  GVN+AS++AGIL++TG + GQ F L QQV NF E  L +++  T+ + TT
Sbjct: 98  PGSTGSKIFSGVNYASAAAGILDETGQNYGQRFSLSQQVLNF-ETTLSQMR--TMANGTT 154

Query: 196 FEDYLAESLFFSNIGNNDFLNRHLLPPNYPLNRDI-PPEFYDMLINEYSILLEKLYSYGA 20
              YLA+S+     G+ND+LN +L+P  YP + +  PP+F ++L+N Y+  +  LYS G 
Sbjct: 155 LSRYLAKSIVIMVFGSNDYLNNYLMPSLYPSSYNYSPPDFANLLLNHYARQILALYSLGL 214

Query: 19  RKFLV 5
           RKF +
Sbjct: 215 RKFFL 219


>ref|XP_002887358.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
           gi|297333199|gb|EFH63617.1| predicted protein
           [Arabidopsis lyrata subsp. lyrata]
          Length = 374

 Score = 96.3 bits (238), Expect = 2e-18
 Identities = 54/125 (43%), Positives = 80/125 (64%), Gaps = 1/125 (0%)
 Frame = -3

Query: 376 PSTIGSNIMQGVNFASSSAGILNDTGFHIGQNFPLFQQVQNFGENILPELKSPTLNSDTT 197
           P+T GS I+QGVN+AS++AGIL+++GF+ G  F L QQ+ N  E  L +L+  T+ S   
Sbjct: 106 PTTSGSRILQGVNYASAAAGILDESGFNYGGRFSLSQQMVNL-ETTLSQLR--TMMSPQN 162

Query: 196 FEDYLAESLFFSNIGNNDFLNRHLLPPNYPLN-RDIPPEFYDMLINEYSILLEKLYSYGA 20
           F DYLA SL     G+ND++N +L+P  Y  + R  PP F ++L+++Y+  L  LY  G 
Sbjct: 163 FTDYLARSLVVLVFGSNDYINNYLMPNLYSSSIRYTPPVFANLLLSQYARQLLTLYGLGL 222

Query: 19  RKFLV 5
           RK  +
Sbjct: 223 RKIFI 227


>ref|XP_002329215.1| predicted protein [Populus trichocarpa] gi|222870996|gb|EEF08127.1|
           predicted protein [Populus trichocarpa]
          Length = 354

 Score = 96.3 bits (238), Expect = 2e-18
 Identities = 54/125 (43%), Positives = 81/125 (64%), Gaps = 1/125 (0%)
 Frame = -3

Query: 376 PSTIGSNIMQGVNFASSSAGILNDTGFHIGQNFPLFQQVQNFGENILPELKSPTLNSDTT 197
           P+T G  I+ GVN+AS++AGIL++TG H GQ + L QQV NF E  L +++  TL S T 
Sbjct: 89  PNTAGPVILGGVNYASAAAGILDETGQHYGQRYSLSQQVLNF-ETTLNQIR--TLMSGTN 145

Query: 196 FEDYLAESLFFSNIGNNDFLNRHLLPPNYPLN-RDIPPEFYDMLINEYSILLEKLYSYGA 20
             +YL +S+     G+ND++N +L+P  Y  +    PP+F ++L+N Y+  L  LY+ G 
Sbjct: 146 LTEYLGKSIAVLVFGSNDYINNYLMPSVYSSSFYYSPPDFANLLVNHYTRQLLALYNLGL 205

Query: 19  RKFLV 5
           RKFL+
Sbjct: 206 RKFLL 210


>ref|XP_002521611.1| zinc finger protein, putative [Ricinus communis]
           gi|223539289|gb|EEF40882.1| zinc finger protein,
           putative [Ricinus communis]
          Length = 368

 Score = 95.5 bits (236), Expect = 4e-18
 Identities = 52/125 (41%), Positives = 82/125 (65%), Gaps = 1/125 (0%)
 Frame = -3

Query: 376 PSTIGSNIMQGVNFASSSAGILNDTGFHIGQNFPLFQQVQNFGENILPELKSPTLNSDTT 197
           P+T G+ I+ GVN+AS++AGIL++TG H G+ + L QQV NF E+ L EL+   + + T 
Sbjct: 100 PATAGARILGGVNYASAAAGILDETGQHYGERYSLSQQVLNF-ESSLNELR--RMMNGTN 156

Query: 196 FEDYLAESLFFSNIGNNDFLNRHLLPPNYPLNRDI-PPEFYDMLINEYSILLEKLYSYGA 20
             ++L +SL     G+ND++N +L+P  Y  +    PP+F ++L+N Y+  L  +YS G 
Sbjct: 157 LTEFLGKSLAVLVFGSNDYINNYLMPSIYSSSYIYSPPQFANLLLNHYARQLYAMYSIGL 216

Query: 19  RKFLV 5
           RKFL+
Sbjct: 217 RKFLI 221


>ref|XP_002518038.1| zinc finger protein, putative [Ricinus communis]
           gi|223543020|gb|EEF44556.1| zinc finger protein,
           putative [Ricinus communis]
          Length = 330

 Score = 95.1 bits (235), Expect = 5e-18
 Identities = 52/125 (41%), Positives = 82/125 (65%), Gaps = 1/125 (0%)
 Frame = -3

Query: 376 PSTIGSNIMQGVNFASSSAGILNDTGFHIGQNFPLFQQVQNFGENILPELKSPTLNSDTT 197
           P+T G+ I+ GVN+AS++AGIL++TG H G+ + L QQV NF E+ L EL+   + + T 
Sbjct: 101 PATAGARILGGVNYASAAAGILDETGQHYGERYSLSQQVLNF-ESSLNELR--RMMNGTN 157

Query: 196 FEDYLAESLFFSNIGNNDFLNRHLLPPNYPLNRDI-PPEFYDMLINEYSILLEKLYSYGA 20
             ++L +SL     G+ND++N +L+P  Y  +    PP+F ++L+N Y+  L  +YS G 
Sbjct: 158 LTEFLGKSLAVLVFGSNDYINNYLMPSIYSSSYIYSPPQFANLLLNHYARQLYAMYSTGL 217

Query: 19  RKFLV 5
           RKFL+
Sbjct: 218 RKFLI 222


Top