BLASTX nr result

ID: Coptis23_contig00033328 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00033328
         (892 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002518800.1| conserved hypothetical protein [Ricinus comm...   339   4e-91
ref|XP_003631315.1| PREDICTED: uncharacterized protein LOC100265...   330   3e-88
emb|CBI27489.3| unnamed protein product [Vitis vinifera]              330   3e-88
ref|XP_002311566.1| predicted protein [Populus trichocarpa] gi|2...   328   1e-87
ref|XP_003524133.1| PREDICTED: uncharacterized protein LOC100802...   318   1e-84

>ref|XP_002518800.1| conserved hypothetical protein [Ricinus communis]
            gi|223542181|gb|EEF43725.1| conserved hypothetical
            protein [Ricinus communis]
          Length = 2820

 Score =  339 bits (870), Expect = 4e-91
 Identities = 164/291 (56%), Positives = 222/291 (76%), Gaps = 10/291 (3%)
 Frame = +3

Query: 3    EQNMLESTSTRTFPSFDETKHNILCSELKQLYVAITRTRQRLWICENMEEFSMPMFDYWK 182
            EQN+L+++S ++FP+F+  +HN+LCSELKQLYVAITRTRQRLWICEN  EF+ P+FDYW+
Sbjct: 1625 EQNLLDASSPQSFPTFNPARHNVLCSELKQLYVAITRTRQRLWICENAAEFAKPIFDYWR 1684

Query: 183  KLFLVQTRKLDDSLAQAMQVASSKEEWSLRGVKLFNEGNFEVATMSFERAGDSYREKWAR 362
            K  +VQ RKLD+SLA AMQVASS EEW  +G KL  E N+E+ATM FERAGD+Y EK A+
Sbjct: 1685 KKAVVQVRKLDNSLALAMQVASSPEEWKSQGYKLLREANYEMATMCFERAGDAYGEKLAK 1744

Query: 363  AAGLRASSDRLRGSNSEHARIALKQAAEMYETISKDEIAAKCFIELKEYKRAGIIYSEKC 542
            AAGL+A++D++  SN + A IA +QAAE++E+I K + AA+CF  L EY+RAG IY + C
Sbjct: 1745 AAGLKAAADKMHVSNPDTASIARRQAAEIFESIGKADYAAECFYMLNEYERAGRIYLQ-C 1803

Query: 543  GD--LEESGDCFSLAGCWNHAAEVYARGNHISKCLSACRKGEIFDMGLNFIKQWKVNAYE 716
            G+  +E +G+CF LAGC+  AAE+YA+GNH SKCL AC +G++FDMGL +I+ WK +   
Sbjct: 1804 GESAIERAGECFYLAGCYECAAEIYAKGNHFSKCLLACTEGKLFDMGLKYIQYWKQHVKA 1863

Query: 717  GVDM--------AMEQDFLEKCAIHYHNKKDAKNMMKFVREFHSMNSIRGF 845
               M        ++EQ+FLE+CA+HYH   D + MM++VR F S++S+R F
Sbjct: 1864 DTCMVKKSREIDSIEQEFLERCALHYHKLNDNRAMMRYVRAFDSISSVRTF 1914


>ref|XP_003631315.1| PREDICTED: uncharacterized protein LOC100265010 [Vitis vinifera]
          Length = 2792

 Score =  330 bits (846), Expect = 3e-88
 Identities = 164/291 (56%), Positives = 212/291 (72%), Gaps = 10/291 (3%)
 Frame = +3

Query: 3    EQNMLESTSTRTFPSFDETKHNILCSELKQLYVAITRTRQRLWICENMEEFSMPMFDYWK 182
            EQN+L+ST+ R++PSF + KHN++CSELKQLYVAITRTRQRLWICEN+EE S PMFDYWK
Sbjct: 1597 EQNLLDSTAPRSYPSFSQEKHNVMCSELKQLYVAITRTRQRLWICENIEELSKPMFDYWK 1656

Query: 183  KLFLVQTRKLDDSLAQAMQVASSKEEWSLRGVKLFNEGNFEVATMSFERAGDSYREKWAR 362
            KL LVQ  +LD+SLA  M+VAS+ EEW   G+KL  E ++E+AT  FERA D+Y  + A+
Sbjct: 1657 KLCLVQVTQLDESLANEMRVASTPEEWKATGIKLLREHHYEMATRCFERAEDTYWARLAK 1716

Query: 363  AAGLRASSDRLRGSNSEHARIALKQAAEMYETISKDEIAAKCFIELKEYKRAGIIYSEKC 542
            A GL+A++++ R  N E A + L++AAE++E I +   AAKCF +L EY+RAG IY EKC
Sbjct: 1717 AHGLKAAAEQKRHLNPEAAHVDLRKAAEIFEEIGEARPAAKCFFQLNEYERAGRIYLEKC 1776

Query: 543  G--DLEESGDCFSLAGCWNHAAEVYARGNHISKCLSACRKGEIFDMGLNFIKQWKVNAYE 716
            G  +LE++G+CFSLA  +  AAEVYARG+  S+CLSAC KG+  DMGL +I  WK +A  
Sbjct: 1777 GESELEKAGECFSLAALYELAAEVYARGHFFSECLSACTKGKFLDMGLRYIHYWKQHATT 1836

Query: 717  GVDM--------AMEQDFLEKCAIHYHNKKDAKNMMKFVREFHSMNSIRGF 845
               M         +EQ+FLE CA HYH  KD + MM+FV+ FHSM S R F
Sbjct: 1837 STFMIKRSKEIGKIEQEFLESCAHHYHELKDNRKMMEFVKAFHSMESKRNF 1887


>emb|CBI27489.3| unnamed protein product [Vitis vinifera]
          Length = 2562

 Score =  330 bits (846), Expect = 3e-88
 Identities = 164/291 (56%), Positives = 212/291 (72%), Gaps = 10/291 (3%)
 Frame = +3

Query: 3    EQNMLESTSTRTFPSFDETKHNILCSELKQLYVAITRTRQRLWICENMEEFSMPMFDYWK 182
            EQN+L+ST+ R++PSF + KHN++CSELKQLYVAITRTRQRLWICEN+EE S PMFDYWK
Sbjct: 1449 EQNLLDSTAPRSYPSFSQEKHNVMCSELKQLYVAITRTRQRLWICENIEELSKPMFDYWK 1508

Query: 183  KLFLVQTRKLDDSLAQAMQVASSKEEWSLRGVKLFNEGNFEVATMSFERAGDSYREKWAR 362
            KL LVQ  +LD+SLA  M+VAS+ EEW   G+KL  E ++E+AT  FERA D+Y  + A+
Sbjct: 1509 KLCLVQVTQLDESLANEMRVASTPEEWKATGIKLLREHHYEMATRCFERAEDTYWARLAK 1568

Query: 363  AAGLRASSDRLRGSNSEHARIALKQAAEMYETISKDEIAAKCFIELKEYKRAGIIYSEKC 542
            A GL+A++++ R  N E A + L++AAE++E I +   AAKCF +L EY+RAG IY EKC
Sbjct: 1569 AHGLKAAAEQKRHLNPEAAHVDLRKAAEIFEEIGEARPAAKCFFQLNEYERAGRIYLEKC 1628

Query: 543  G--DLEESGDCFSLAGCWNHAAEVYARGNHISKCLSACRKGEIFDMGLNFIKQWKVNAYE 716
            G  +LE++G+CFSLA  +  AAEVYARG+  S+CLSAC KG+  DMGL +I  WK +A  
Sbjct: 1629 GESELEKAGECFSLAALYELAAEVYARGHFFSECLSACTKGKFLDMGLRYIHYWKQHATT 1688

Query: 717  GVDM--------AMEQDFLEKCAIHYHNKKDAKNMMKFVREFHSMNSIRGF 845
               M         +EQ+FLE CA HYH  KD + MM+FV+ FHSM S R F
Sbjct: 1689 STFMIKRSKEIGKIEQEFLESCAHHYHELKDNRKMMEFVKAFHSMESKRNF 1739


>ref|XP_002311566.1| predicted protein [Populus trichocarpa] gi|222851386|gb|EEE88933.1|
            predicted protein [Populus trichocarpa]
          Length = 1950

 Score =  328 bits (841), Expect = 1e-87
 Identities = 170/287 (59%), Positives = 215/287 (74%), Gaps = 6/287 (2%)
 Frame = +3

Query: 3    EQNMLESTSTRTFPSFDETKHNILCSELKQLYVAITRTRQRLWICENMEEFSMPMFDYWK 182
            EQ++L++ S  +FPSF   KHN+LCSELKQLYVAITRTRQRLWICEN+EEFS PMFDYW 
Sbjct: 1452 EQDLLDANSP-SFPSFIPAKHNVLCSELKQLYVAITRTRQRLWICENVEEFSRPMFDYWT 1510

Query: 183  KLFLVQTRKLDDSLAQAMQVASSKEEWSLRGVKLFNEGNFEVATMSFERAGDSYREKWAR 362
            K  LVQ RKLDDSLAQAMQV+SS EEW  +G KL  EGN+E+ATM FERAGD + EK ++
Sbjct: 1511 KKGLVQVRKLDDSLAQAMQVSSSPEEWKSQGYKLLREGNYEMATMCFERAGDEHGEKLSK 1570

Query: 363  AAGLRASSDRLRGSNSEHARIALKQAAEMYETISKDEIAAKCFIELKEYKRAGIIYSEKC 542
            AAG +A++DR+  SN E A +A +QAAE++E+I K E AA+CF  LKEY RAG IY + C
Sbjct: 1571 AAGHKAAADRMHSSNPEMASVARRQAAEIFESIGKAEYAAECFYMLKEYDRAGRIYLQ-C 1629

Query: 543  GD--LEESGDCFSLAGCWNHAAEVYARGNHISKCLSACRKGEIFDMGLNFIKQWKVNA-- 710
            G+  +E +G+CF LAG +  AAEVYA+G + SKCLSAC KG++FD GL++I  WK +   
Sbjct: 1630 GESAMERAGECFFLAGSYCSAAEVYAKGWNFSKCLSACTKGKLFDTGLHYILYWKQHGTA 1689

Query: 711  -YEGVDM-AMEQDFLEKCAIHYHNKKDAKNMMKFVREFHSMNSIRGF 845
                 +M  +EQ+FLE CA HY+   D + MM++VR F SM+S R F
Sbjct: 1690 DQRSREMDTIEQEFLESCACHYYELNDNRAMMRYVRAFDSMSSARTF 1736


>ref|XP_003524133.1| PREDICTED: uncharacterized protein LOC100802419 [Glycine max]
          Length = 2812

 Score =  318 bits (814), Expect = 1e-84
 Identities = 164/300 (54%), Positives = 214/300 (71%), Gaps = 19/300 (6%)
 Frame = +3

Query: 3    EQNMLESTSTRTFPSFDETKHNILCSELKQLYVAITRTRQRLWICENMEEFSMPMFDYWK 182
            EQ MLE T  +++P+F ++KHN+LCSELKQLYVAITRTRQRLWICEN E +S PMFDYW+
Sbjct: 1610 EQEMLEPTELKSYPNFSDSKHNLLCSELKQLYVAITRTRQRLWICENTEVYSRPMFDYWR 1669

Query: 183  KLFLVQTRKLDDSLAQAMQVASSKEEWSLRGVK--------LFNEGNFEVATMSFERAGD 338
            K  LVQ ++LDDSLAQAM+VASS EEW  RG K        L+ + N+E+ATM FERAGD
Sbjct: 1670 KKGLVQFKELDDSLAQAMKVASSPEEWRSRGKKITLVVRLQLYYQNNYEMATMCFERAGD 1729

Query: 339  SYREKWARAAGLRASSDRLRGSNSEHARIALKQAAEMYETISKDEIAAKCFIELKEYKRA 518
            SY E+ ++A+GLRA+++RLR  N E +   L++AAE++E I   E AA+CF +L +Y+RA
Sbjct: 1730 SYWERKSKASGLRANANRLRDLNPEDSNAMLREAAEIFEGIGMAESAAQCFSDLGDYERA 1789

Query: 519  GIIYSEKC--GDLEESGDCFSLAGCWNHAAEVYARGNHISKCLSACRKGEIFDMGLNFIK 692
            G +Y EKC   DL+ +GDCF LAGC+  AA VYA G+  S CL+ C KG +FD+GL +I+
Sbjct: 1790 GKLYLEKCEEPDLKRAGDCFYLAGCYETAARVYAGGSFFSDCLNVCAKGGLFDIGLYYIQ 1849

Query: 693  QWKVNAYEGVDMAM---------EQDFLEKCAIHYHNKKDAKNMMKFVREFHSMNSIRGF 845
             W+ N  E  D  M         EQ FLE CA +Y ++KD ++MMKFV+ FHSM+  R F
Sbjct: 1850 HWEKN--ENADHCMVDSHELFTIEQKFLENCARNYLDRKDTRSMMKFVKAFHSMDLKREF 1907


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