BLASTX nr result

ID: Coptis23_contig00033321 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00033321
         (703 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAN60219.1| hypothetical protein VITISV_011848 [Vitis vinifera]    64   3e-08
ref|XP_002274666.1| PREDICTED: uncharacterized protein LOC100251...    62   1e-07
ref|XP_002308413.1| predicted protein [Populus trichocarpa] gi|2...    59   7e-07

>emb|CAN60219.1| hypothetical protein VITISV_011848 [Vitis vinifera]
          Length = 488

 Score = 63.9 bits (154), Expect = 3e-08
 Identities = 44/145 (30%), Positives = 72/145 (49%), Gaps = 1/145 (0%)
 Frame = -3

Query: 701 ERKKLVWEEEKRLVKPDPIPHGNIKYGCRDEAGFRKNSLQCEDDEKKRTKPREMDSGNCH 522
           E+ KL+ E+E RL+ PD +     +   RDE  + K S    + E +  KP+   +    
Sbjct: 320 EQSKLILEDEDRLLMPDSVSKEAAESYIRDETDWEKESFLSANHENRLIKPKHGMAFESD 379

Query: 521 SGLADITTSIFQFHNDVQLLNKRLEKLEGETSIVKQGVSGCXXXXXXXXXEIHEQLSTIK 342
                 T  + +   + Q L +R+++LE E  I++Q   G          EIHE+L+ I+
Sbjct: 380 LAFPCSTIGVAECQAEFQQLVRRMKQLEDEREIIRQDNGG--EEELKLLREIHEKLNLIQ 437

Query: 341 SQIRSTEIKD-CPSAEEPSLFSIME 270
           S+IRS   K   P  ++P+L S+ME
Sbjct: 438 SEIRSLRPKKRSPPPDDPALVSLME 462


>ref|XP_002274666.1| PREDICTED: uncharacterized protein LOC100251975 [Vitis vinifera]
          Length = 517

 Score = 62.0 bits (149), Expect = 1e-07
 Identities = 43/145 (29%), Positives = 71/145 (48%), Gaps = 1/145 (0%)
 Frame = -3

Query: 701 ERKKLVWEEEKRLVKPDPIPHGNIKYGCRDEAGFRKNSLQCEDDEKKRTKPREMDSGNCH 522
           E+ KL+ E+E RL+ PD +     +   RDE  + K S    + E +  KP+   +    
Sbjct: 320 EQSKLILEDEDRLLMPDSVSKEAAESYIRDETDWEKESFLSANHENRLIKPKHGMAFESD 379

Query: 521 SGLADITTSIFQFHNDVQLLNKRLEKLEGETSIVKQGVSGCXXXXXXXXXEIHEQLSTIK 342
                 T  + +   + Q L +R+++LE E  I++Q   G          EIHE+L+ I+
Sbjct: 380 LAFPCSTIGVAECQAEFQQLVRRMKQLEDEREIIRQDNGG--EEELKLLREIHEKLNLIQ 437

Query: 341 SQIRSTEIKD-CPSAEEPSLFSIME 270
           S+I S   K   P  ++P+L S+ME
Sbjct: 438 SEIESLRPKKRSPPPDDPALVSLME 462


>ref|XP_002308413.1| predicted protein [Populus trichocarpa] gi|222854389|gb|EEE91936.1|
           predicted protein [Populus trichocarpa]
          Length = 491

 Score = 59.3 bits (142), Expect = 7e-07
 Identities = 48/147 (32%), Positives = 68/147 (46%), Gaps = 3/147 (2%)
 Frame = -3

Query: 701 ERKKLVWEEEKRLVKPDPIPHGNIKYGCRDEAGFRKNSLQCEDDEKKRTKPREMDSGNCH 522
           E  KL  E E RL KPD +    ++   +DE G  K  +     EKK  K RE    N H
Sbjct: 337 EHHKLTLEGENRLQKPDMVSKDILESPNQDERGLIKTIMLSTIHEKKLPKGRE--GTNVH 394

Query: 521 SGLADITTSIFQFHN---DVQLLNKRLEKLEGETSIVKQGVSGCXXXXXXXXXEIHEQLS 351
             L  ++   F F N   + Q L++R+E+LE   +  +Q +            EI EQL 
Sbjct: 395 RNLPPMSRPTFSFSNSQGEYQQLSQRVERLERARNNTRQEIIAEGEEEVNLLKEIREQLY 454

Query: 350 TIKSQIRSTEIKDCPSAEEPSLFSIME 270
           +I+S+IRS   K     +EP L  + E
Sbjct: 455 SIQSEIRSLTTKKPHVPDEPPLKPLHE 481


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