BLASTX nr result

ID: Coptis23_contig00033309 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00033309
         (833 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003549503.1| PREDICTED: UPF0066 protein HI_0510-like [Gly...   320   2e-85
ref|NP_001242602.1| uncharacterized protein LOC100812211 [Glycin...   312   5e-83
ref|XP_002325083.1| predicted protein [Populus trichocarpa] gi|2...   312   5e-83
ref|XP_003610206.1| Nef-associated protein [Medicago truncatula]...   308   1e-81
ref|XP_002278148.1| PREDICTED: uncharacterized protein LOC100261...   305   1e-80

>ref|XP_003549503.1| PREDICTED: UPF0066 protein HI_0510-like [Glycine max]
          Length = 394

 Score =  320 bits (820), Expect = 2e-85
 Identities = 157/239 (65%), Positives = 186/239 (77%), Gaps = 3/239 (1%)
 Frame = -2

Query: 712 LMGTSENSKWLKVTMTLAVAAISISVFVYXXXXXXXXXXXXXXEISLKASIAKCTAERKG 533
           + G    +KWL V++TL + A+SIS +V               E SLK+    C +ER+G
Sbjct: 1   MRGNIWETKWLTVSITLTLTAVSISAYVLKRKWNHLNSKIEELEASLKSFSDNCASERQG 60

Query: 532 RTRAQQALRKSLTQSNSESKK---TSYPMTPIAIVESCFRTRYGTPRQPLLVPLARACLV 362
           R RAQQALRK +TQS   S+K   TSYPM PI +V SCF TR GTPRQPLLVPLARACLV
Sbjct: 61  RIRAQQALRKEVTQSQPNSQKLNLTSYPMMPIGVVHSCFSTRNGTPRQPLLVPLARACLV 120

Query: 361 FDTSEAPPAALEGLSEYSHCWIIYVFHLNTNMDKFWKQCSKVGLKAKVKPPKLKGGKMGV 182
           F+T+  PPA+LEGL EYSHCWI+YVFHLNT++DK WK  SK G KAKV+ P+LKGG+ GV
Sbjct: 121 FNTTRVPPASLEGLEEYSHCWILYVFHLNTDLDKLWKHPSKSGFKAKVRVPRLKGGRKGV 180

Query: 181 FATRSPHRPCPIGLTLAKVEAVQGNMVLLSGVDLVDGTPVLDIKPYLPYCESIKDASVP 5
           FATRSPHRPCPIGLT+AKVEAVQGNM+LLSGVDLVDGTPVLDIKPYLPYC++I++A+VP
Sbjct: 181 FATRSPHRPCPIGLTVAKVEAVQGNMILLSGVDLVDGTPVLDIKPYLPYCDNIQEATVP 239


>ref|NP_001242602.1| uncharacterized protein LOC100812211 [Glycine max]
           gi|255642295|gb|ACU21412.1| unknown [Glycine max]
          Length = 394

 Score =  312 bits (800), Expect = 5e-83
 Identities = 154/239 (64%), Positives = 185/239 (77%), Gaps = 3/239 (1%)
 Frame = -2

Query: 712 LMGTSENSKWLKVTMTLAVAAISISVFVYXXXXXXXXXXXXXXEISLKASIAKCTAERKG 533
           + G    ++WL V++T+ V AISIS +V               E SLK+   KC +ER+G
Sbjct: 1   MRGNIWETQWLTVSITVTVTAISISAYVLKRKWNHLNSKIEELEASLKSCSDKCASERQG 60

Query: 532 RTRAQQALRKSLTQSNSESKK---TSYPMTPIAIVESCFRTRYGTPRQPLLVPLARACLV 362
           R RAQ ALRK +TQS  +S+    TSYPM PI +V SCF TR GTPRQPLLVPLARACLV
Sbjct: 61  RIRAQLALRKQVTQSQPKSQNLNLTSYPMIPIGVVHSCFSTRNGTPRQPLLVPLARACLV 120

Query: 361 FDTSEAPPAALEGLSEYSHCWIIYVFHLNTNMDKFWKQCSKVGLKAKVKPPKLKGGKMGV 182
           F+T   PPA+LEGL+EYSHCWI+YVFHLNT+++K WK  SK G KAKV+ P+LKGG+ G+
Sbjct: 121 FNTMRVPPASLEGLAEYSHCWILYVFHLNTDLEKLWKHPSKSGFKAKVRVPRLKGGRKGL 180

Query: 181 FATRSPHRPCPIGLTLAKVEAVQGNMVLLSGVDLVDGTPVLDIKPYLPYCESIKDASVP 5
           FATRSPHRPCPIGLT+AKVEAV GNM+LLSGVDLVDGTPVLDIKPYLPYC+SI++A+VP
Sbjct: 181 FATRSPHRPCPIGLTVAKVEAVLGNMILLSGVDLVDGTPVLDIKPYLPYCDSIQEAAVP 239


>ref|XP_002325083.1| predicted protein [Populus trichocarpa] gi|222866517|gb|EEF03648.1|
           predicted protein [Populus trichocarpa]
          Length = 399

 Score =  312 bits (800), Expect = 5e-83
 Identities = 159/243 (65%), Positives = 187/243 (76%), Gaps = 8/243 (3%)
 Frame = -2

Query: 709 MGTSENSKWLKVTMTLAVA-------AISISVFVYXXXXXXXXXXXXXXEISLKASIAKC 551
           MG++ NSKWL VT T+ VA         +IS++                EISL + + K 
Sbjct: 1   MGSTVNSKWLPVTTTITVALALLSASTAAISLYFCRKKSKVLYSKIQELEISLNSCMQKS 60

Query: 550 TAERKGRTRAQQALRKSLTQSNSES-KKTSYPMTPIAIVESCFRTRYGTPRQPLLVPLAR 374
            AER+GR RAQQ LRK+L Q  SE+ ++ SYPMTPI +V+SCF TR GTPRQPLLVPLAR
Sbjct: 61  AAERQGRIRAQQDLRKTLAQPKSENLEQASYPMTPIGVVQSCFSTRNGTPRQPLLVPLAR 120

Query: 373 ACLVFDTSEAPPAALEGLSEYSHCWIIYVFHLNTNMDKFWKQCSKVGLKAKVKPPKLKGG 194
           ACLVFD++  PPA+LEGL EYSHCWIIYVFHLNT++ K WK  S+   KAKV+ P+LKGG
Sbjct: 121 ACLVFDSARVPPASLEGLVEYSHCWIIYVFHLNTDLVKLWKHPSRSKFKAKVRVPRLKGG 180

Query: 193 KMGVFATRSPHRPCPIGLTLAKVEAVQGNMVLLSGVDLVDGTPVLDIKPYLPYCESIKDA 14
           KMGVFATRSPHRPCPIGLT+AKVEAVQGNMVLLSGVDLVDGTP+LDIKPYLPYC+SI+ A
Sbjct: 181 KMGVFATRSPHRPCPIGLTVAKVEAVQGNMVLLSGVDLVDGTPILDIKPYLPYCDSIQGA 240

Query: 13  SVP 5
           +VP
Sbjct: 241 AVP 243


>ref|XP_003610206.1| Nef-associated protein [Medicago truncatula]
           gi|355511261|gb|AES92403.1| Nef-associated protein
           [Medicago truncatula]
          Length = 514

 Score =  308 bits (788), Expect = 1e-81
 Identities = 154/235 (65%), Positives = 183/235 (77%), Gaps = 6/235 (2%)
 Frame = -2

Query: 691 SKWLKVTM----TLAVA-AISISVFVYXXXXXXXXXXXXXXEISLKASIAKCTAERKGRT 527
           ++WL VT     TL+ A +ISIS +++              E+SLK+    C +ER+GR 
Sbjct: 5   ARWLAVTTITLTTLSAAISISISAYIFNRKCNALKSKIHELELSLKSCSDNCASERQGRI 64

Query: 526 RAQQALRKSLTQSNSESKK-TSYPMTPIAIVESCFRTRYGTPRQPLLVPLARACLVFDTS 350
           RAQQ LRK LTQ  SE+   T YPM PI  + SCF TR GTPRQPLLVPLARACLVF+TS
Sbjct: 65  RAQQMLRKQLTQPKSENLNLTYYPMIPIGTIHSCFSTRNGTPRQPLLVPLARACLVFNTS 124

Query: 349 EAPPAALEGLSEYSHCWIIYVFHLNTNMDKFWKQCSKVGLKAKVKPPKLKGGKMGVFATR 170
             PPA+LEGL+EYSHCWIIYVFHLNTN++K WK  S+ G KAKV+ P+LKGGK+GVF TR
Sbjct: 125 RVPPASLEGLAEYSHCWIIYVFHLNTNLEKLWKHPSQSGFKAKVRVPRLKGGKIGVFGTR 184

Query: 169 SPHRPCPIGLTLAKVEAVQGNMVLLSGVDLVDGTPVLDIKPYLPYCESIKDASVP 5
           SPHRPCPIGLT+AKVEAVQGNM+LLSGVDLVDGTPVLD+KPYLPYC+SI++A+VP
Sbjct: 185 SPHRPCPIGLTVAKVEAVQGNMILLSGVDLVDGTPVLDVKPYLPYCDSIQEAAVP 239


>ref|XP_002278148.1| PREDICTED: uncharacterized protein LOC100261628 [Vitis vinifera]
           gi|297735319|emb|CBI17759.3| unnamed protein product
           [Vitis vinifera]
          Length = 384

 Score =  305 bits (780), Expect = 1e-80
 Identities = 149/236 (63%), Positives = 183/236 (77%), Gaps = 1/236 (0%)
 Frame = -2

Query: 709 MGTSENSKWLKVTMTLAVAAISISVFVYXXXXXXXXXXXXXXEISLKASIAKCTAERKGR 530
           M  +  SKWL  T+    A  +IS+++                ISLK+S+ KC AER+GR
Sbjct: 1   MACTYKSKWLTPTLAAISATAAISIYLLRRKLRDLE-------ISLKSSLEKCAAERQGR 53

Query: 529 TRAQQALRKSLTQSNSESKK-TSYPMTPIAIVESCFRTRYGTPRQPLLVPLARACLVFDT 353
            RAQQALRK++ Q  S++ + TSYPM PIAI++SCF TR GTPRQPLLVPLARACL+FD+
Sbjct: 54  IRAQQALRKAIVQPKSDNMEMTSYPMRPIAIIQSCFSTRNGTPRQPLLVPLARACLIFDS 113

Query: 352 SEAPPAALEGLSEYSHCWIIYVFHLNTNMDKFWKQCSKVGLKAKVKPPKLKGGKMGVFAT 173
           +  PPA+LEGL EYSHCWIIYVFHLNT+++K WK  SK   KAKV+ P+LKGG+MGVFAT
Sbjct: 114 ARVPPASLEGLGEYSHCWIIYVFHLNTDLEKLWKDPSKSKFKAKVRVPRLKGGRMGVFAT 173

Query: 172 RSPHRPCPIGLTLAKVEAVQGNMVLLSGVDLVDGTPVLDIKPYLPYCESIKDASVP 5
           R+PHRP PIGLT+AKVEAV GNMVLLSGVDLVDGTPVLD+KPYLPYC+ ++ A++P
Sbjct: 174 RTPHRPNPIGLTVAKVEAVHGNMVLLSGVDLVDGTPVLDVKPYLPYCDCVQGAALP 229


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