BLASTX nr result

ID: Coptis23_contig00033306 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00033306
         (222 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002272383.2| PREDICTED: niemann-Pick C1 protein-like [Vit...   138   5e-31
emb|CBI40718.3| unnamed protein product [Vitis vinifera]              138   5e-31
ref|XP_004157117.1| PREDICTED: niemann-Pick C1 protein-like [Cuc...   136   2e-30
ref|XP_004145542.1| PREDICTED: niemann-Pick C1 protein-like [Cuc...   136   2e-30
ref|XP_002510680.1| hedgehog receptor, putative [Ricinus communi...   135   3e-30

>ref|XP_002272383.2| PREDICTED: niemann-Pick C1 protein-like [Vitis vinifera]
          Length = 1309

 Score =  138 bits (347), Expect = 5e-31
 Identities = 64/73 (87%), Positives = 70/73 (95%)
 Frame = -2

Query: 221  LCTRIQPGLEQKVVLPQDSYLQGYFNNISEYLRIGPPLYFVVKNYNYSLESRQTNRLCSI 42
            LCTRI+PGLEQK+VLP+DSYLQGYFNN+SEYLRIGPPLYFVVKNYNYS ESR TN+LCSI
Sbjct: 879  LCTRIEPGLEQKIVLPRDSYLQGYFNNVSEYLRIGPPLYFVVKNYNYSSESRHTNQLCSI 938

Query: 41   SQCDSKSLLNEIA 3
            SQC+S SLLNEIA
Sbjct: 939  SQCNSDSLLNEIA 951


>emb|CBI40718.3| unnamed protein product [Vitis vinifera]
          Length = 1242

 Score =  138 bits (347), Expect = 5e-31
 Identities = 64/73 (87%), Positives = 70/73 (95%)
 Frame = -2

Query: 221  LCTRIQPGLEQKVVLPQDSYLQGYFNNISEYLRIGPPLYFVVKNYNYSLESRQTNRLCSI 42
            LCTRI+PGLEQK+VLP+DSYLQGYFNN+SEYLRIGPPLYFVVKNYNYS ESR TN+LCSI
Sbjct: 812  LCTRIEPGLEQKIVLPRDSYLQGYFNNVSEYLRIGPPLYFVVKNYNYSSESRHTNQLCSI 871

Query: 41   SQCDSKSLLNEIA 3
            SQC+S SLLNEIA
Sbjct: 872  SQCNSDSLLNEIA 884


>ref|XP_004157117.1| PREDICTED: niemann-Pick C1 protein-like [Cucumis sativus]
          Length = 1296

 Score =  136 bits (342), Expect = 2e-30
 Identities = 64/73 (87%), Positives = 70/73 (95%)
 Frame = -2

Query: 221  LCTRIQPGLEQKVVLPQDSYLQGYFNNISEYLRIGPPLYFVVKNYNYSLESRQTNRLCSI 42
            LCTRI+ GLEQK+VLP+DSYLQGYFNNISE+LRIGPP+YFVVKNYNYS ESRQTN+LCSI
Sbjct: 856  LCTRIEAGLEQKIVLPKDSYLQGYFNNISEHLRIGPPVYFVVKNYNYSSESRQTNQLCSI 915

Query: 41   SQCDSKSLLNEIA 3
            SQCDS SLLNEIA
Sbjct: 916  SQCDSDSLLNEIA 928


>ref|XP_004145542.1| PREDICTED: niemann-Pick C1 protein-like [Cucumis sativus]
          Length = 1244

 Score =  136 bits (342), Expect = 2e-30
 Identities = 64/73 (87%), Positives = 70/73 (95%)
 Frame = -2

Query: 221  LCTRIQPGLEQKVVLPQDSYLQGYFNNISEYLRIGPPLYFVVKNYNYSLESRQTNRLCSI 42
            LCTRI+ GLEQK+VLP+DSYLQGYFNNISE+LRIGPP+YFVVKNYNYS ESRQTN+LCSI
Sbjct: 812  LCTRIEAGLEQKIVLPKDSYLQGYFNNISEHLRIGPPVYFVVKNYNYSSESRQTNQLCSI 871

Query: 41   SQCDSKSLLNEIA 3
            SQCDS SLLNEIA
Sbjct: 872  SQCDSDSLLNEIA 884


>ref|XP_002510680.1| hedgehog receptor, putative [Ricinus communis]
            gi|223551381|gb|EEF52867.1| hedgehog receptor, putative
            [Ricinus communis]
          Length = 1235

 Score =  135 bits (341), Expect = 3e-30
 Identities = 63/73 (86%), Positives = 69/73 (94%)
 Frame = -2

Query: 221  LCTRIQPGLEQKVVLPQDSYLQGYFNNISEYLRIGPPLYFVVKNYNYSLESRQTNRLCSI 42
            L TR++PGLEQK+VLP+DSYLQGYFNN+SEYLRIGPPLYFVVKNYNYS ESR TN+LCSI
Sbjct: 813  LSTRVEPGLEQKIVLPRDSYLQGYFNNVSEYLRIGPPLYFVVKNYNYSSESRHTNQLCSI 872

Query: 41   SQCDSKSLLNEIA 3
            SQCDS SLLNEIA
Sbjct: 873  SQCDSDSLLNEIA 885


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