BLASTX nr result

ID: Coptis23_contig00033305 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00033305
         (451 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAN70078.1| hypothetical protein VITISV_001036 [Vitis vinifera]    62   4e-08
ref|XP_003518690.1| PREDICTED: uncharacterized protein LOC100805...    60   1e-07
ref|XP_003536822.1| PREDICTED: uncharacterized protein LOC100800...    59   3e-07
ref|XP_003614979.1| Otubain [Medicago truncatula] gi|355516314|g...    56   3e-06

>emb|CAN70078.1| hypothetical protein VITISV_001036 [Vitis vinifera]
          Length = 773

 Score = 62.4 bits (150), Expect = 4e-08
 Identities = 27/87 (31%), Positives = 46/87 (52%)
 Frame = -1

Query: 388 WFELPSMGFLAANTFQCVLVVIGEKECMSYFPLWTAPDPTRVQXXXXXXXXXGTHFVKLV 209
           W  +P MG + A+ +  VLV I  + C+++ PL +AP P  ++           HFV+++
Sbjct: 658 WMTMPDMGHIIASRYNVVLVYISMQLCLTFLPLRSAPTPLPMRRVLSIGFINDNHFVEIL 717

Query: 208 LEDDSPIPPLAPGWESFAWTEAWDWAT 128
           +   +P+PP+A  W    +  A  WAT
Sbjct: 718 MTTGAPMPPVANSWSKSCYPCAEGWAT 744


>ref|XP_003518690.1| PREDICTED: uncharacterized protein LOC100805365 [Glycine max]
          Length = 878

 Score = 60.5 bits (145), Expect = 1e-07
 Identities = 33/101 (32%), Positives = 52/101 (51%), Gaps = 1/101 (0%)
 Frame = -1

Query: 388  WFELPSMGFLAANTFQCVLVVIGEKECMSYFPLWTAPDPTR-VQXXXXXXXXXGTHFVKL 212
            W  +P MG++ A+ +  VLV +  +ECM++FPL   P  ++              HFV++
Sbjct: 765  WMTIPDMGYVIASRYNVVLVTLSLQECMTFFPLRGRPPLSQSSHRLISIGFVHKCHFVQV 824

Query: 211  VLEDDSPIPPLAPGWESFAWTEAWDWATIMEPRIVKHEFRN 89
            VL+ DS IPP A  W  +   E+  W T    R+   +FR+
Sbjct: 825  VLKADSAIPPTALQWSRYCNAESRSWETSYVSRM--QQFRS 863


>ref|XP_003536822.1| PREDICTED: uncharacterized protein LOC100800409 [Glycine max]
          Length = 877

 Score = 59.3 bits (142), Expect = 3e-07
 Identities = 32/101 (31%), Positives = 52/101 (51%), Gaps = 1/101 (0%)
 Frame = -1

Query: 388  WFELPSMGFLAANTFQCVLVVIGEKECMSYFPLWTAPDPTRVQ-XXXXXXXXXGTHFVKL 212
            W  +P MG++ A+ +  VLV +  +ECM++FPL   P  ++              HFV++
Sbjct: 764  WMTIPDMGYVIASRYNVVLVTLSLQECMTFFPLRGRPPLSQSSYRLISIGFVHKCHFVQV 823

Query: 211  VLEDDSPIPPLAPGWESFAWTEAWDWATIMEPRIVKHEFRN 89
            VL+ DS +PP A  W  +   E+  W T    R+   +FR+
Sbjct: 824  VLKADSVLPPTALQWSRYCNAESRSWETSYVSRM--QQFRS 862


>ref|XP_003614979.1| Otubain [Medicago truncatula] gi|355516314|gb|AES97937.1| Otubain
           [Medicago truncatula]
          Length = 569

 Score = 55.8 bits (133), Expect = 3e-06
 Identities = 32/99 (32%), Positives = 43/99 (43%), Gaps = 2/99 (2%)
 Frame = -1

Query: 391 EWFELPSMGFLAANTFQCVLVVI--GEKECMSYFPLWTAPDPTRVQXXXXXXXXXGTHFV 218
           +W  +P MGFL A  F   +VV+  G     +YFPL   P P  +            HF+
Sbjct: 418 KWMTMPDMGFLIAQKFNQPIVVLSTGFGPSATYFPLCGPPPPPSISPLMCLAYVNDNHFM 477

Query: 217 KLVLEDDSPIPPLAPGWESFAWTEAWDWATIMEPRIVKH 101
            L L+DD PIPP    W      +A  W      R+V +
Sbjct: 478 ALDLKDDCPIPPTCNLWRRHYREDADSWPDRYASRMVDY 516


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