BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00033285
         (488 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003621690.1| Cytochrome c biogenesis protein ccsA [Medica...    74   4e-15
ref|XP_002313562.1| predicted protein [Populus trichocarpa] gi|2...    65   2e-14
ref|XP_002329612.1| predicted protein [Populus trichocarpa] gi|2...    65   3e-14
ref|XP_002332211.1| predicted protein [Populus trichocarpa] gi|2...    65   1e-13
ref|XP_002331075.1| predicted protein [Populus trichocarpa] gi|2...    64   2e-13

>ref|XP_003621690.1| Cytochrome c biogenesis protein ccsA [Medicago truncatula]
           gi|355496705|gb|AES77908.1| Cytochrome c biogenesis
           protein ccsA [Medicago truncatula]
          Length = 666

 Score = 73.6 bits (179), Expect(2) = 4e-15
 Identities = 33/79 (41%), Positives = 43/79 (54%)
 Frame = +3

Query: 6   NKVKWYRLIWGRLVLPKHSFTGWQLFANALPTQDRLVKRKVLTQSNCCFCNTSREHSKHL 185
           N V W + +W   + P  SF  W+L  N LPT + L KR  L  S CCFC  S E S+H+
Sbjct: 32  NHVLWDKFLWNSYIPPSRSFITWRLLHNKLPTDENLRKRGCLIVSICCFCMKSAESSQHI 91

Query: 186 FFDCQFTRGVWAKVKRWIG 242
           FF+C  T  +W     W+G
Sbjct: 92  FFECHVTSRLW----DWLG 106



 Score = 32.3 bits (72), Expect(2) = 4e-15
 Identities = 13/42 (30%), Positives = 25/42 (59%)
 Frame = +2

Query: 323 IIKAIVCATVYAIWRERNARRFQQKQRTEEQVFSRVQTEMKI 448
           I+ + +  T+++IW ERN R F  K +    +F+ +  E+K+
Sbjct: 136 ILNSAIIHTIWSIWIERNQRCFHNKHQAMTTLFNIILAEVKM 177


>ref|XP_002313562.1| predicted protein [Populus trichocarpa] gi|222849970|gb|EEE87517.1|
           predicted protein [Populus trichocarpa]
          Length = 331

 Score = 65.5 bits (158), Expect(2) = 2e-14
 Identities = 24/72 (33%), Positives = 42/72 (58%)
 Frame = +3

Query: 3   RNKVKWYRLIWGRLVLPKHSFTGWQLFANALPTQDRLVKRKVLTQSNCCFCNTSREHSKH 182
           R+ V+W+ ++W +  +P+HSF  W +    L TQD+L +  +   + C  C  + E   H
Sbjct: 155 RHMVEWHDIVWFKNAVPRHSFLLWMVVQQKLTTQDKLHRFGIHGPNRCSLCLRNNEDHNH 214

Query: 183 LFFDCQFTRGVW 218
           LFF+C +T+ +W
Sbjct: 215 LFFECSYTKAIW 226



 Score = 38.1 bits (87), Expect(2) = 2e-14
 Identities = 19/50 (38%), Positives = 28/50 (56%)
 Frame = +2

Query: 329 KAIVCATVYAIWRERNARRFQQKQRTEEQVFSRVQTEMKIYLQTVLKEVP 478
           K    ATVY +W+ERNAR F    RT   VF++++  ++  L  +   VP
Sbjct: 264 KLSFAATVYHVWQERNARIFAGLSRTSNLVFNQIECIIRDKLDLMRNVVP 313


>ref|XP_002329612.1| predicted protein [Populus trichocarpa] gi|222870351|gb|EEF07482.1|
            predicted protein [Populus trichocarpa]
          Length = 1046

 Score = 64.7 bits (156), Expect(2) = 3e-14
 Identities = 24/72 (33%), Positives = 41/72 (56%)
 Frame = +3

Query: 3    RNKVKWYRLIWGRLVLPKHSFTGWQLFANALPTQDRLVKRKVLTQSNCCFCNTSREHSKH 182
            R  V+W+ ++W +  +P+HSF  W +    L TQD+L +  +   + C  C  + E   H
Sbjct: 870  RQLVEWHDIVWFKNAVPRHSFLLWMVVQQKLTTQDKLHRFGIHGPNRCSLCLRNNEDHNH 929

Query: 183  LFFDCQFTRGVW 218
            LFF+C +T+ +W
Sbjct: 930  LFFECSYTKAIW 941



 Score = 38.1 bits (87), Expect(2) = 3e-14
 Identities = 19/50 (38%), Positives = 28/50 (56%)
 Frame = +2

Query: 329  KAIVCATVYAIWRERNARRFQQKQRTEEQVFSRVQTEMKIYLQTVLKEVP 478
            K    ATVY +W+ERNAR F    RT   VF++++  ++  L  +   VP
Sbjct: 979  KLSFAATVYHVWQERNARIFAGLSRTSNLVFNQIECIIRDKLDLMRNVVP 1028


>ref|XP_002332211.1| predicted protein [Populus trichocarpa] gi|222874875|gb|EEF12006.1|
            predicted protein [Populus trichocarpa]
          Length = 1386

 Score = 65.1 bits (157), Expect(2) = 1e-13
 Identities = 24/72 (33%), Positives = 40/72 (55%)
 Frame = +3

Query: 3    RNKVKWYRLIWGRLVLPKHSFTGWQLFANALPTQDRLVKRKVLTQSNCCFCNTSREHSKH 182
            R  V+W+ ++W +  +P+HSF  W      L TQD+L +  +   + C  C  + E   H
Sbjct: 1210 RQMVEWHDIVWFKNAVPRHSFLLWMAVQQKLTTQDKLYRFGIHGPNRCSLCLRNNEDHNH 1269

Query: 183  LFFDCQFTRGVW 218
            LFF+C +T+ +W
Sbjct: 1270 LFFECSYTKAIW 1281



 Score = 35.8 bits (81), Expect(2) = 1e-13
 Identities = 18/50 (36%), Positives = 27/50 (54%)
 Frame = +2

Query: 329  KAIVCATVYAIWRERNARRFQQKQRTEEQVFSRVQTEMKIYLQTVLKEVP 478
            K    ATVY +W+ERNAR F    RT   V ++++  ++  L  +   VP
Sbjct: 1319 KLSFAATVYHVWQERNARIFAGMSRTPNLVLNQIECIIRDKLDLMRNVVP 1368


>ref|XP_002331075.1| predicted protein [Populus trichocarpa] gi|222873039|gb|EEF10170.1|
           predicted protein [Populus trichocarpa]
          Length = 517

 Score = 64.3 bits (155), Expect(2) = 2e-13
 Identities = 24/72 (33%), Positives = 40/72 (55%)
 Frame = +3

Query: 3   RNKVKWYRLIWGRLVLPKHSFTGWQLFANALPTQDRLVKRKVLTQSNCCFCNTSREHSKH 182
           R  V+W+ ++W +  +P+HSF  W      L TQD+L +  +   + C  C  + E   H
Sbjct: 337 RQMVEWHDIVWFKNAVPRHSFLLWMAVQQKLTTQDKLHRFGIHGPNRCSLCLRNNEDHNH 396

Query: 183 LFFDCQFTRGVW 218
           LFF+C +T+ +W
Sbjct: 397 LFFECSYTKAIW 408



 Score = 35.8 bits (81), Expect(2) = 2e-13
 Identities = 18/50 (36%), Positives = 27/50 (54%)
 Frame = +2

Query: 329 KAIVCATVYAIWRERNARRFQQKQRTEEQVFSRVQTEMKIYLQTVLKEVP 478
           K    ATVY +W+ERNAR F    RT   V ++++  ++  L  +   VP
Sbjct: 446 KLSFAATVYHVWQERNARIFAGMSRTPNLVLNQIECIIRDKLDLMRNVVP 495