BLASTX nr result

ID: Coptis23_contig00033283 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00033283
         (361 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAN78584.1| hypothetical protein VITISV_016764 [Vitis vinifera]   146   2e-33
ref|XP_002262910.2| PREDICTED: uncharacterized protein LOC100244...   145   3e-33
ref|XP_003537561.1| PREDICTED: uncharacterized protein LOC100805...   137   9e-31
ref|XP_003601914.1| hypothetical protein MTR_3g086740 [Medicago ...   131   5e-29
ref|XP_002510752.1| conserved hypothetical protein [Ricinus comm...   125   5e-27

>emb|CAN78584.1| hypothetical protein VITISV_016764 [Vitis vinifera]
          Length = 1258

 Score =  146 bits (368), Expect = 2e-33
 Identities = 70/104 (67%), Positives = 80/104 (76%)
 Frame = -3

Query: 317 SLLSVPVWTMYCNGKKVGSAIKRRPMHADMEVLRLMRSVYVGTGVINGKTLNCDDELMYL 138
           +LLS+PVWTM CNG+KVG A+KR P  ADM VL LM SV VG G+I+ K LNCDDELMYL
Sbjct: 138 TLLSIPVWTMCCNGRKVGFAVKRTPSKADMNVLGLMGSVIVGAGIISAKELNCDDELMYL 197

Query: 137 RANFERVSRSSNSESFHLVSPDGSTGQELSIFFLRTK*VQSTHH 6
           RANFERV  SSNSESFHL+ PDG+ GQEL IFF R++      H
Sbjct: 198 RANFERVRSSSNSESFHLIDPDGNIGQELGIFFFRSRFFNGNSH 241


>ref|XP_002262910.2| PREDICTED: uncharacterized protein LOC100244914 [Vitis vinifera]
           gi|297745713|emb|CBI41038.3| unnamed protein product
           [Vitis vinifera]
          Length = 234

 Score =  145 bits (366), Expect = 3e-33
 Identities = 69/97 (71%), Positives = 79/97 (81%)
 Frame = -3

Query: 317 SLLSVPVWTMYCNGKKVGSAIKRRPMHADMEVLRLMRSVYVGTGVINGKTLNCDDELMYL 138
           +LLS+PVWTM CNG+KVG A+KR P  ADM VL LM SV VG G+I+ K LNCDDELMYL
Sbjct: 138 TLLSIPVWTMCCNGRKVGFAVKRTPSKADMNVLGLMGSVIVGAGIISAKELNCDDELMYL 197

Query: 137 RANFERVSRSSNSESFHLVSPDGSTGQELSIFFLRTK 27
           RANFERV  SSNSESFHL+ PDG+ GQEL IFF R++
Sbjct: 198 RANFERVRSSSNSESFHLIDPDGNIGQELGIFFFRSR 234


>ref|XP_003537561.1| PREDICTED: uncharacterized protein LOC100805400 [Glycine max]
          Length = 240

 Score =  137 bits (345), Expect = 9e-31
 Identities = 64/101 (63%), Positives = 80/101 (79%)
 Frame = -3

Query: 332 NSSYSSLLSVPVWTMYCNGKKVGSAIKRRPMHADMEVLRLMRSVYVGTGVINGKTLNCDD 153
           N++ ++L S P+W+MYCNG+KVG A+KRRP + D E L LMRSV VGTGVIN    + +D
Sbjct: 138 NNNNNNLFSTPLWSMYCNGRKVGYAVKRRPSNGDFEALSLMRSVAVGTGVINSSCCSKED 197

Query: 152 ELMYLRANFERVSRSSNSESFHLVSPDGSTGQELSIFFLRT 30
           E+MYLRANF+RV  SSN ESFHL+ P+GS GQELSIFF R+
Sbjct: 198 EIMYLRANFQRVRGSSNCESFHLIDPEGSIGQELSIFFFRS 238


>ref|XP_003601914.1| hypothetical protein MTR_3g086740 [Medicago truncatula]
           gi|355490962|gb|AES72165.1| hypothetical protein
           MTR_3g086740 [Medicago truncatula]
          Length = 242

 Score =  131 bits (330), Expect = 5e-29
 Identities = 65/101 (64%), Positives = 80/101 (79%), Gaps = 3/101 (2%)
 Frame = -3

Query: 320 SSLLSVPVWTMYCNGKKVGSAIKRRPMHADMEVLRLMRSVYVGTGVINGKTL-NCDDELM 144
           S+L S P+W MYCNG+KVG ++KR+P  +D+E L LMRSV VGTGVINGK +   DD+LM
Sbjct: 142 SNLFSTPLWIMYCNGRKVGYSVKRKPSRSDLEALNLMRSVSVGTGVINGKEICQEDDQLM 201

Query: 143 YLRANFERV--SRSSNSESFHLVSPDGSTGQELSIFFLRTK 27
           YLRANF+RV  S  SN ESFHL+ P+GS GQELSIFF ++K
Sbjct: 202 YLRANFQRVRGSSKSNCESFHLIDPEGSIGQELSIFFFQSK 242


>ref|XP_002510752.1| conserved hypothetical protein [Ricinus communis]
           gi|223551453|gb|EEF52939.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 224

 Score =  125 bits (313), Expect = 5e-27
 Identities = 62/110 (56%), Positives = 85/110 (77%)
 Frame = -3

Query: 359 ALECKYEPDNSSYSSLLSVPVWTMYCNGKKVGSAIKRRPMHADMEVLRLMRSVYVGTGVI 180
           ALEC  + + SS  SL +VPVW+MYCNG+KVG AI+R+   +D+ VL++M+SV VG GV+
Sbjct: 115 ALECDRQKERSSSCSLFNVPVWSMYCNGRKVGFAIRRQMTVSDVGVLKMMQSVSVGAGVL 174

Query: 179 NGKTLNCDDELMYLRANFERVSRSSNSESFHLVSPDGSTGQELSIFFLRT 30
                + D +LMYLRA+FERV  S++SESFH+++P GS+GQELSIF LR+
Sbjct: 175 PVPPKSQDGDLMYLRASFERVIGSADSESFHMINPIGSSGQELSIFMLRS 224


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