BLASTX nr result

ID: Coptis23_contig00033268 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00033268
         (397 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002310773.1| predicted protein [Populus trichocarpa] gi|2...   145   4e-33
ref|XP_002880522.1| hypothetical protein ARALYDRAFT_343930 [Arab...   134   6e-30
ref|XP_003631861.1| PREDICTED: uncharacterized protein LOC100853...   132   4e-29
ref|XP_004141949.1| PREDICTED: uncharacterized protein LOC101203...   129   2e-28
ref|NP_850043.2| uncharacterized protein [Arabidopsis thaliana] ...   125   4e-27

>ref|XP_002310773.1| predicted protein [Populus trichocarpa] gi|222853676|gb|EEE91223.1|
           predicted protein [Populus trichocarpa]
          Length = 175

 Score =  145 bits (365), Expect = 4e-33
 Identities = 70/110 (63%), Positives = 83/110 (75%)
 Frame = +1

Query: 7   FTTCSLLMAFLFAYSASVQLNDPDWYLWFPLYTTASLVNLLRNTSTSRTVKQTAKLAFWL 186
           F+ CSLLMA LF YSASVQLNDPDWY W PLY  A  VNL+    ++ T++Q AK+  W 
Sbjct: 7   FSLCSLLMAALFGYSASVQLNDPDWYFWLPLYACACAVNLVNWAISNTTIRQIAKVTLWF 66

Query: 187 GTFLFLKVVIEDYVDELAGFGSLNLEERVVREKVGSGLVMISMLLHLEVS 336
              LF+KVVIEDYV+  AGF SL++ ERVVREK GSGLV+ISM+LHLE S
Sbjct: 67  AALLFVKVVIEDYVNGTAGFWSLDVSERVVREKTGSGLVLISMILHLEAS 116


>ref|XP_002880522.1| hypothetical protein ARALYDRAFT_343930 [Arabidopsis lyrata subsp.
           lyrata] gi|297326361|gb|EFH56781.1| hypothetical protein
           ARALYDRAFT_343930 [Arabidopsis lyrata subsp. lyrata]
          Length = 152

 Score =  134 bits (338), Expect = 6e-30
 Identities = 69/114 (60%), Positives = 83/114 (72%), Gaps = 3/114 (2%)
 Frame = +1

Query: 4   IFTTCSLLMAFLFAYSASVQLNDPDWYLWFPLYTTASLVNLL---RNTSTSRTVKQTAKL 174
           +F  CSLLMAFLFAYSASVQLNDPDWY WFPLYT + ++NL+   R  S SR +KQ    
Sbjct: 7   LFRVCSLLMAFLFAYSASVQLNDPDWYFWFPLYTLSCVINLINCRRRISKSRRIKQMIGT 66

Query: 175 AFWLGTFLFLKVVIEDYVDELAGFGSLNLEERVVREKVGSGLVMISMLLHLEVS 336
           A  LG FL +KVV+ED + E  G  SL+L  RVVREK+GSGLV+ SM+L L+ S
Sbjct: 67  ALSLGLFLLVKVVVEDVITEKVGVLSLDLTHRVVREKIGSGLVIASMVLQLQSS 120


>ref|XP_003631861.1| PREDICTED: uncharacterized protein LOC100853825 [Vitis vinifera]
           gi|297735228|emb|CBI17590.3| unnamed protein product
           [Vitis vinifera]
          Length = 165

 Score =  132 bits (331), Expect = 4e-29
 Identities = 64/118 (54%), Positives = 88/118 (74%), Gaps = 2/118 (1%)
 Frame = +1

Query: 1   KIFTTCSLLMAFLFAYSASVQLNDPDWYLWFPLYTTASLVNLLRNTS--TSRTVKQTAKL 174
           K+F+ CSLLMA LFA+S+SVQ +DPDWY WFPLY +A  VNL+      + + +++ AKL
Sbjct: 6   KLFSLCSLLMASLFAWSSSVQFDDPDWYFWFPLYASACGVNLINGIGALSLKPIRKIAKL 65

Query: 175 AFWLGTFLFLKVVIEDYVDELAGFGSLNLEERVVREKVGSGLVMISMLLHLEVSVVSE 348
           A WLG FLF+KV +E++V  +AGF SL+L+E+VVREK GSG V+ SM L L+ + V +
Sbjct: 66  ALWLGVFLFIKVAVEEFVYGIAGFWSLDLKEKVVREKFGSGFVVNSMYLQLQAASVQK 123


>ref|XP_004141949.1| PREDICTED: uncharacterized protein LOC101203807 [Cucumis sativus]
           gi|449497709|ref|XP_004160489.1| PREDICTED:
           uncharacterized LOC101203807 [Cucumis sativus]
          Length = 168

 Score =  129 bits (325), Expect = 2e-28
 Identities = 63/109 (57%), Positives = 81/109 (74%)
 Frame = +1

Query: 1   KIFTTCSLLMAFLFAYSASVQLNDPDWYLWFPLYTTASLVNLLRNTSTSRTVKQTAKLAF 180
           K++++CS+LM FLFAYS +VQ NDPDWYLW PLY  A  VNLL+   +   +   AK A 
Sbjct: 6   KLYSSCSVLMGFLFAYSTAVQFNDPDWYLWVPLYGCACAVNLLKWNVSLEAMNNVAKAAM 65

Query: 181 WLGTFLFLKVVIEDYVDELAGFGSLNLEERVVREKVGSGLVMISMLLHL 327
            +G  L++KVV EDY++ +AGF SL+L ERVVREK GSGLV+ SM+LHL
Sbjct: 66  GVGICLWVKVVAEDYMNGIAGFLSLDLSERVVREKTGSGLVVCSMILHL 114


>ref|NP_850043.2| uncharacterized protein [Arabidopsis thaliana]
           gi|29725826|gb|AAO89207.1| hypothetical protein
           [Arabidopsis thaliana] gi|50058903|gb|AAT69196.1|
           hypothetical protein At2g23755 [Arabidopsis thaliana]
           gi|330252391|gb|AEC07485.1| uncharacterized protein
           [Arabidopsis thaliana]
          Length = 150

 Score =  125 bits (314), Expect = 4e-27
 Identities = 66/112 (58%), Positives = 80/112 (71%), Gaps = 1/112 (0%)
 Frame = +1

Query: 4   IFTTCSLLMAFLFAYSASVQLNDPDWYLWFPLYTTASLVNLLRNTSTSRTVK-QTAKLAF 180
           +F  CSLLMAFLFAYSASVQLNDPDWY WFPLYT A +VNL+   +  R +K    + A 
Sbjct: 7   LFRVCSLLMAFLFAYSASVQLNDPDWYFWFPLYTLACVVNLI---NYRRRIKLMMMRTAL 63

Query: 181 WLGTFLFLKVVIEDYVDELAGFGSLNLEERVVREKVGSGLVMISMLLHLEVS 336
            LG FL +KV+ ED + E  G  SL+L  RVVREK+GSGLV+ SM+L L+ S
Sbjct: 64  SLGVFLLVKVIAEDVITEKVGVLSLDLTHRVVREKIGSGLVIASMVLQLQAS 115


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