BLASTX nr result

ID: Coptis23_contig00033262 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00033262
         (665 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002268525.2| PREDICTED: histone-lysine N-methyltransferas...    89   1e-15
ref|XP_004165578.1| PREDICTED: histone-lysine N-methyltransferas...    82   7e-14
ref|XP_004145618.1| PREDICTED: histone-lysine N-methyltransferas...    82   7e-14
ref|NP_194520.3| histone-lysine N-methyltransferase ATX4 [Arabid...    78   1e-12
ref|XP_003527980.1| PREDICTED: histone-lysine N-methyltransferas...    78   1e-12

>ref|XP_002268525.2| PREDICTED: histone-lysine N-methyltransferase ATX4-like [Vitis
           vinifera]
          Length = 1094

 Score = 88.6 bits (218), Expect = 1e-15
 Identities = 58/145 (40%), Positives = 79/145 (54%), Gaps = 11/145 (7%)
 Frame = -1

Query: 470 MIVKRELKTRMPILKRC-----SNKNGELSERKKRRKLNNGSFSLDL------RTIPFNG 324
           MI+KR LK++MP +KRC     +  + E    KK+RK+ NG F L+L        IP +G
Sbjct: 1   MIIKRNLKSKMPSMKRCRLGHSAADDDESPAAKKKRKM-NGYFPLNLLGDVAAGIIPLSG 59

Query: 323 YGFRRIFGNDDCKNNFFRLAASWCTEYSSYNYXXXXXXXXXXXXXXXXXXXXXXVRPPLV 144
           YG +RIFG      +   + ASWCTE S+                          RPPLV
Sbjct: 60  YGLQRIFG-----GHVGDVEASWCTEISTC-AGEVVSKSKDGDGVGAMNRAAQVHRPPLV 113

Query: 143 KTSRGRIQVLPSRFNDSVIEPLKKD 69
           +TSRGR+QVLPSRFNDS+++  +K+
Sbjct: 114 RTSRGRVQVLPSRFNDSILDNWRKE 138


>ref|XP_004165578.1| PREDICTED: histone-lysine N-methyltransferase ATX4-like, partial
           [Cucumis sativus]
          Length = 485

 Score = 82.4 bits (202), Expect = 7e-14
 Identities = 61/144 (42%), Positives = 78/144 (54%), Gaps = 7/144 (4%)
 Frame = -1

Query: 470 MIVKRELKTRMPILKRCSN-----KNGELSERKKRRKLNNGSFSLDLRTIPFNGYGFRRI 306
           MI+KR LKT+MP LKRC +     ++ E S  +K+RKLN G + L+L  +     G   +
Sbjct: 1   MIIKRNLKTQMPNLKRCKHGDSVGEDDETSAARKKRKLN-GYYPLNL--LGEVAAGIIPL 57

Query: 305 FGNDDCKNNFFRLAASWCTEYS-SYNYXXXXXXXXXXXXXXXXXXXXXXVRPPLVKTSRG 129
             +D    N   + ASWCT+ S S                          RPPLV+TSRG
Sbjct: 58  KLHDILGTNNKGITASWCTQISCSAMEMESKSNSRESLAREATKRPAEVPRPPLVRTSRG 117

Query: 128 RIQVLPSRFNDSVIEPLKKD-KTS 60
           R+QVLPSRFNDSVIE  +KD KTS
Sbjct: 118 RVQVLPSRFNDSVIENWRKDSKTS 141


>ref|XP_004145618.1| PREDICTED: histone-lysine N-methyltransferase ATX4-like [Cucumis
           sativus]
          Length = 1073

 Score = 82.4 bits (202), Expect = 7e-14
 Identities = 61/144 (42%), Positives = 78/144 (54%), Gaps = 7/144 (4%)
 Frame = -1

Query: 470 MIVKRELKTRMPILKRCSN-----KNGELSERKKRRKLNNGSFSLDLRTIPFNGYGFRRI 306
           MI+KR LKT+MP LKRC +     ++ E S  +K+RKLN G + L+L  +     G   +
Sbjct: 1   MIIKRNLKTQMPNLKRCKHGDSVGEDDETSAARKKRKLN-GYYPLNL--LGEVAAGIIPL 57

Query: 305 FGNDDCKNNFFRLAASWCTEYS-SYNYXXXXXXXXXXXXXXXXXXXXXXVRPPLVKTSRG 129
             +D    N   + ASWCT+ S S                          RPPLV+TSRG
Sbjct: 58  KLHDILGTNNKGITASWCTQISCSAMEMESKSNSRESLAREATKRPAEVPRPPLVRTSRG 117

Query: 128 RIQVLPSRFNDSVIEPLKKD-KTS 60
           R+QVLPSRFNDSVIE  +KD KTS
Sbjct: 118 RVQVLPSRFNDSVIENWRKDSKTS 141


>ref|NP_194520.3| histone-lysine N-methyltransferase ATX4 [Arabidopsis thaliana]
           gi|229488104|sp|Q9SUE7.3|ATX4_ARATH RecName:
           Full=Histone-lysine N-methyltransferase ATX4; AltName:
           Full=Protein SET DOMAIN GROUP 16; AltName:
           Full=Trithorax-homolog protein 4; Short=TRX-homolog
           protein 4; Short=Trithorax 4 gi|332660008|gb|AEE85408.1|
           histone-lysine N-methyltransferase ATX4 [Arabidopsis
           thaliana]
          Length = 1027

 Score = 78.2 bits (191), Expect = 1e-12
 Identities = 56/140 (40%), Positives = 72/140 (51%), Gaps = 3/140 (2%)
 Frame = -1

Query: 470 MIVKRELKTRMPILKRCSNKNGELSERKKRRKLN--NGSFSLDLRTIPFNGYGFRRIFGN 297
           MI+KR+ KT++P L+RC   N     RKK+RKLN   G +   L  +     G   + GN
Sbjct: 1   MIIKRKFKTQIPSLERCKLGN---ESRKKKRKLNLGGGGYYYPLNLLGEIAAGI--VPGN 55

Query: 296 DDCKNNFFRLAASWCTEYSS-YNYXXXXXXXXXXXXXXXXXXXXXXVRPPLVKTSRGRIQ 120
              +N F   +ASWCTE +                            RPPLV+TSRGRIQ
Sbjct: 56  G--RNGF---SASWCTEVTKPVEVEESLSKRRSDSGTVRDSPPAEVSRPPLVRTSRGRIQ 110

Query: 119 VLPSRFNDSVIEPLKKDKTS 60
           VLPSRFNDSV++  +KD  S
Sbjct: 111 VLPSRFNDSVLDNWRKDSKS 130


>ref|XP_003527980.1| PREDICTED: histone-lysine N-methyltransferase ATX4-like [Glycine
           max]
          Length = 1067

 Score = 78.2 bits (191), Expect = 1e-12
 Identities = 58/152 (38%), Positives = 77/152 (50%), Gaps = 12/152 (7%)
 Frame = -1

Query: 470 MIVKRELKTRMPILKRCS-----NKNGELSERKKRRKLNNGSFSLDLR------TIPFNG 324
           MI+KR LK++MP LKR        +N E S  +K+RK NNG + L+L        IP + 
Sbjct: 1   MIIKRNLKSQMPSLKRVKLGDSVGENDECSYARKKRKTNNGYYPLNLLGDVAAGVIPVSF 60

Query: 323 YGFRRIFGNDDCKNNFFRLAASWCTEYSSYNYXXXXXXXXXXXXXXXXXXXXXXVRPPLV 144
           +G   + G        F  +A+WC    S                          RPPLV
Sbjct: 61  HG---LLGAAGVVEKGF--SAAWCNGVES---------NVKNEVVVEVKKKNEVQRPPLV 106

Query: 143 KTSRGRIQVLPSRFNDSVIEPLKKD-KTSRGG 51
           +TSRGR+QVLPSRFNDSVI+  +K+ K+S GG
Sbjct: 107 RTSRGRVQVLPSRFNDSVIDNWRKESKSSSGG 138


Top