BLASTX nr result

ID: Coptis23_contig00033257 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00033257
         (606 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CCH50966.1| T4.5 [Malus x robusta]                                125   4e-27
emb|CAN73795.1| hypothetical protein VITISV_036649 [Vitis vinifera]   111   9e-23
emb|CAN71108.1| hypothetical protein VITISV_001478 [Vitis vinifera]   109   4e-22
emb|CAN68489.1| hypothetical protein VITISV_037543 [Vitis vinifera]   109   4e-22
emb|CAN67403.1| hypothetical protein VITISV_025614 [Vitis vinifera]   108   6e-22

>emb|CCH50966.1| T4.5 [Malus x robusta]
          Length = 1670

 Score =  125 bits (315), Expect = 4e-27
 Identities = 77/221 (34%), Positives = 115/221 (52%), Gaps = 19/221 (8%)
 Frame = +1

Query: 1    CLDPHTGRVFVFRHIIFN*TDFPYKTVFTNHTINSNSSLTSCHP----FIKIP----HQC 156
            C DP + R+++ RH++F+ + FPYK++ +  + +S    +  HP     + +P     Q 
Sbjct: 995  CWDPISNRLYISRHVVFDESLFPYKSLSSQASHHSPCVSSPLHPPMSLHLPLPVSHLEQQ 1054

Query: 157  NS-----QSFNSCPDNSFTHSISSSDPCLXXXXXXXXXXXXXXXXXXXXXD------HTM 303
            +S     +  N+ P + F+ +  ++ P                              HTM
Sbjct: 1055 SSPAAALEGRNASPPSIFSTAAHTTIPSSAQESLHTPPVSSSPAEPPPLPPPIPVNTHTM 1114

Query: 304  QTRGKSGIHKPKIYTATKHPLPTALSTTLQNMPKAPTTFSQAVKDPQWREAMAAEYNALL 483
             TR K+GIHKPK++TATKH LP+ + + L  +P  P+TF QA K   W EAM  E+ AL 
Sbjct: 1115 ITRAKAGIHKPKVFTATKHQLPSTVDS-LTALPPTPSTFLQASKSSHWMEAMQFEFQALQ 1173

Query: 484  QNKTWILVPPADGQNVVGYKWVFRIKQKADRTIDKLKARLV 606
               TW LVP     N+VG KWVF++K K D TI++ KARLV
Sbjct: 1174 STGTWELVPNHSTYNIVGCKWVFKVKHKPDGTIERYKARLV 1214


>emb|CAN73795.1| hypothetical protein VITISV_036649 [Vitis vinifera]
          Length = 828

 Score =  111 bits (278), Expect = 9e-23
 Identities = 74/211 (35%), Positives = 102/211 (48%), Gaps = 9/211 (4%)
 Frame = +1

Query: 1   CLDPHTGRVFVFRHIIFN*TDFPYKTVFTNHTINSNSSLTSCHPFIKIP--HQCNSQSFN 174
           CL+P TGRV++ +H++F  T FP++ + +    +S+   T   PF + P      + S  
Sbjct: 283 CLNPTTGRVYISKHVVFAETTFPFQALTSPSHQSSHFPXTPAFPFPQSPILFPSTTSSPX 342

Query: 175 SCPDNSFTHSISSSDPCLXXXXXXXXXXXXXXXXXXXXXD-------HTMQTRGKSGIHK 333
           + P      S  +S   L                     D       H M TR KSGI K
Sbjct: 343 AIPSEPVPTSPXTSSLSLPPLIQVXFMDEAXEISTXSFQDSTAPIXSHPMITRSKSGICK 402

Query: 334 PKIYTATKHPLPTALSTTLQNMPKAPTTFSQAVKDPQWREAMAAEYNALLQNKTWILVPP 513
            K Y              L ++   P T  QA++DP W+ AM  EY ALL+N+TW LVPP
Sbjct: 403 KKTY--------------LTSLIAEPHTVKQALQDPNWKLAMEXEYQALLKNQTWSLVPP 448

Query: 514 ADGQNVVGYKWVFRIKQKADRTIDKLKARLV 606
                ++G KWVF++K K D  ID+ KARLV
Sbjct: 449 PSNVKIIGCKWVFKLKHKXDGNIDRYKARLV 479


>emb|CAN71108.1| hypothetical protein VITISV_001478 [Vitis vinifera]
          Length = 1354

 Score =  109 bits (272), Expect = 4e-22
 Identities = 80/220 (36%), Positives = 105/220 (47%), Gaps = 18/220 (8%)
 Frame = +1

Query: 1    CLDPHTGRVFVFRHIIFN*TDFPYKTVFT-----NHT--------INSNSSLTSCHPFIK 141
            CLD  T +++V RH+ F  + FPY ++ T     N T        I S S+ TS      
Sbjct: 702  CLDXSTSKLYVSRHVQFVESVFPYTSLHTTLPRPNSTTISTWIPXILSVSTPTSSQQEAI 761

Query: 142  IPHQCNSQSF-----NSCPDNSFTHSISSSDPCLXXXXXXXXXXXXXXXXXXXXXDHTMQ 306
             P   +SQ        S P   F H  SS+                          H M 
Sbjct: 762  TPSAASSQGLPLFETTSPPAAPFPHQASSAPQ---PSPQPSLTTTEPPIPVPPPTQHRMT 818

Query: 307  TRGKSGIHKPKIYTATKHPLPTALSTTLQNMPKAPTTFSQAVKDPQWREAMAAEYNALLQ 486
            TR K+ I KP          PT  +TT       PT+ SQA+KD  WR+AM+ EY+AL++
Sbjct: 819  TRAKNNITKPIQKLNLHTHKPTFQTTT-------PTSISQALKDQNWRQAMSDEYDALVR 871

Query: 487  NKTWILVPPADGQNVVGYKWVFRIKQKADRTIDKLKARLV 606
            N TW LVPP D  N+VG KW+FRIK+ +D +ID+ KARLV
Sbjct: 872  NGTWELVPPEDITNLVGCKWIFRIKRNSDGSIDRYKARLV 911


>emb|CAN68489.1| hypothetical protein VITISV_037543 [Vitis vinifera]
          Length = 1449

 Score =  109 bits (272), Expect = 4e-22
 Identities = 72/209 (34%), Positives = 105/209 (50%), Gaps = 7/209 (3%)
 Frame = +1

Query: 1    CLDPHTGRVFVFRHIIFN*TDFPYKTVFTNHTINSNSSLTSCHPFIKIPHQCNSQSFNSC 180
            CL+P TGR++V RH++F+ T FP+++     T + +SS+ +      +P  C+S   +S 
Sbjct: 782  CLNPLTGRLYVTRHVVFHETVFPFQS-----TPDQSSSVVTIPTPAFLP--CSSPPVSSL 834

Query: 181  PDNSFTHSISS-------SDPCLXXXXXXXXXXXXXXXXXXXXXDHTMQTRGKSGIHKPK 339
              ++ T S SS       S                          H M TR K+GI K K
Sbjct: 835  RSHT-TXSTSSPPLTNMPSSTISLPDLIQVPFADISTSEPHPTNQHPMVTRAKNGISKKK 893

Query: 340  IYTATKHPLPTALSTTLQNMPKAPTTFSQAVKDPQWREAMAAEYNALLQNKTWILVPPAD 519
            +Y ++                  PTTF+QAVKD  W  AM  E++AL +N TW LVPP  
Sbjct: 894  VYFSSHI--------------SEPTTFTQAVKDSNWVLAMEKEFSALQRNNTWHLVPPPS 939

Query: 520  GQNVVGYKWVFRIKQKADRTIDKLKARLV 606
              N++G KWV+++K K D T+D+ KARLV
Sbjct: 940  NGNIIGCKWVYKLKYKPDGTVDRYKARLV 968


>emb|CAN67403.1| hypothetical protein VITISV_025614 [Vitis vinifera]
          Length = 1271

 Score =  108 bits (271), Expect = 6e-22
 Identities = 72/209 (34%), Positives = 105/209 (50%), Gaps = 7/209 (3%)
 Frame = +1

Query: 1    CLDPHTGRVFVFRHIIFN*TDFPYKTVFTNHTINSNSSLTSCHPFIKIPHQCNSQSFNSC 180
            CL+P TGR++V RH++F+ T FP+++     T + +SS+ +      +P  C+S   +S 
Sbjct: 591  CLNPLTGRLYVTRHVVFHETVFPFQS-----TPDQSSSVVTIPTPAFLP--CSSPPVSSL 643

Query: 181  PDNSFTHSISS-------SDPCLXXXXXXXXXXXXXXXXXXXXXDHTMQTRGKSGIHKPK 339
              ++ T S SS       S                          H M TR K+GI K K
Sbjct: 644  RSHT-TPSTSSPPLTNMPSSTISLPDLIQVPFADISTSEPHPTNQHPMVTRAKNGISKKK 702

Query: 340  IYTATKHPLPTALSTTLQNMPKAPTTFSQAVKDPQWREAMAAEYNALLQNKTWILVPPAD 519
            +Y ++                  PTTF+QAVKD  W  AM  E++AL +N TW LVPP  
Sbjct: 703  VYFSSHI--------------SEPTTFTQAVKDSNWVLAMEKEFSALQRNNTWHLVPPPS 748

Query: 520  GQNVVGYKWVFRIKQKADRTIDKLKARLV 606
              N++G KWV+++K K D T+D+ KARLV
Sbjct: 749  NGNIIGCKWVYKLKYKPDGTVDRYKARLV 777


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