BLASTX nr result

ID: Coptis23_contig00033247 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00033247
         (283 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002510742.1| bubr1, putative [Ricinus communis] gi|223551...    97   1e-18
ref|XP_002307827.1| predicted protein [Populus trichocarpa] gi|2...    87   1e-15
ref|XP_002300613.1| predicted protein [Populus trichocarpa] gi|2...    83   3e-14
ref|NP_001240240.1| uncharacterized protein LOC100799090 [Glycin...    82   4e-14
ref|XP_003589688.1| Mitotic checkpoint serine/threonine-protein ...    77   1e-12

>ref|XP_002510742.1| bubr1, putative [Ricinus communis] gi|223551443|gb|EEF52929.1|
           bubr1, putative [Ricinus communis]
          Length = 380

 Score = 97.4 bits (241), Expect = 1e-18
 Identities = 47/84 (55%), Positives = 61/84 (72%)
 Frame = -3

Query: 254 RVHRTPLSVYKDTDANVIRNNQPELSKMDATSWLTLGTRSERNKENTAIPTTWNTNKISK 75
           R  R+ LS+YKDT+++V+  +QP  SK D  +W  LG R+ERNKEN AIPT W T K+ +
Sbjct: 252 RAQRSALSIYKDTNSDVLPGHQPGKSKTDFNTWQNLGARAERNKENNAIPTKWTTYKVPQ 311

Query: 74  KPGSRAVAASASRFIEVFVDEECM 3
           +PG RA  A+AS  IEVFVDEEC+
Sbjct: 312 RPGPRA-GATASACIEVFVDEECV 334


>ref|XP_002307827.1| predicted protein [Populus trichocarpa] gi|222857276|gb|EEE94823.1|
           predicted protein [Populus trichocarpa]
          Length = 383

 Score = 87.4 bits (215), Expect = 1e-15
 Identities = 42/84 (50%), Positives = 57/84 (67%), Gaps = 1/84 (1%)
 Frame = -3

Query: 254 RVHRTPLSVYKDTDA-NVIRNNQPELSKMDATSWLTLGTRSERNKENTAIPTTWNTNKIS 78
           R  + PLS++KDT + + +  +Q   SK D + W TLG R ER+KEN+A+PT W T KI 
Sbjct: 252 RTQKIPLSIFKDTTSIDTMPGHQSGKSKTDLSPWSTLGAREERDKENSALPTKWTTYKIP 311

Query: 77  KKPGSRAVAASASRFIEVFVDEEC 6
           ++PG+R    +AS  IEVFVDEEC
Sbjct: 312 RRPGARTGGVTASASIEVFVDEEC 335


>ref|XP_002300613.1| predicted protein [Populus trichocarpa] gi|222842339|gb|EEE79886.1|
           predicted protein [Populus trichocarpa]
          Length = 382

 Score = 82.8 bits (203), Expect = 3e-14
 Identities = 39/81 (48%), Positives = 55/81 (67%), Gaps = 1/81 (1%)
 Frame = -3

Query: 245 RTPLSVYKDT-DANVIRNNQPELSKMDATSWLTLGTRSERNKENTAIPTTWNTNKISKKP 69
           + PLS++KDT + + +  +Q   +K +   W TLG R ERNKEN+A+PT W T KI ++P
Sbjct: 254 KIPLSIFKDTTNIDAMPGHQSVKAKPELNPWSTLGAREERNKENSAVPTKWTTYKIPQRP 313

Query: 68  GSRAVAASASRFIEVFVDEEC 6
           G+R+   +A   IEVFVDEEC
Sbjct: 314 GARSGGVTAGASIEVFVDEEC 334


>ref|NP_001240240.1| uncharacterized protein LOC100799090 [Glycine max]
           gi|255642110|gb|ACU21321.1| unknown [Glycine max]
          Length = 384

 Score = 82.0 bits (201), Expect = 4e-14
 Identities = 43/84 (51%), Positives = 55/84 (65%), Gaps = 1/84 (1%)
 Frame = -3

Query: 254 RVHRTPLSVYKDT-DANVIRNNQPELSKMDATSWLTLGTRSERNKENTAIPTTWNTNKIS 78
           R    PLS+YKD+ D      ++P+LS     SW TLG R++RNKEN AIP  W + KI 
Sbjct: 257 RTRAAPLSIYKDSADTGDTDPHKPDLSH----SWHTLGARADRNKENNAIPGKWKSYKIP 312

Query: 77  KKPGSRAVAASASRFIEVFVDEEC 6
           ++PG+R   A+AS FI VFVDEEC
Sbjct: 313 QRPGTRTGGATASAFIPVFVDEEC 336


>ref|XP_003589688.1| Mitotic checkpoint serine/threonine-protein kinase BUB1 beta
           [Medicago truncatula] gi|355478736|gb|AES59939.1|
           Mitotic checkpoint serine/threonine-protein kinase BUB1
           beta [Medicago truncatula]
          Length = 390

 Score = 77.4 bits (189), Expect = 1e-12
 Identities = 42/83 (50%), Positives = 52/83 (62%), Gaps = 1/83 (1%)
 Frame = -3

Query: 254 RVHRTPLSVYKDTDANVIR-NNQPELSKMDATSWLTLGTRSERNKENTAIPTTWNTNKIS 78
           R    PLS+YKD++AN      QP+ S     SWL LG R+ERNKEN AIP  W + K+ 
Sbjct: 264 RTRAAPLSIYKDSNANAETCPPQPDPSH----SWLKLGGRAERNKENNAIPAKWKSFKVP 319

Query: 77  KKPGSRAVAASASRFIEVFVDEE 9
           ++PG+RA    AS  I VFVDEE
Sbjct: 320 QRPGTRATVVGASACIPVFVDEE 342


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