BLASTX nr result

ID: Coptis23_contig00033242 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00033242
         (298 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002515052.1| conserved hypothetical protein [Ricinus comm...    86   3e-15
ref|XP_004143056.1| PREDICTED: uncharacterized protein LOC101208...    79   5e-13
ref|XP_002315652.1| predicted protein [Populus trichocarpa] gi|2...    78   7e-13
ref|XP_002282178.2| PREDICTED: uncharacterized protein LOC100255...    77   1e-12
emb|CBI16822.3| unnamed protein product [Vitis vinifera]               77   1e-12

>ref|XP_002515052.1| conserved hypothetical protein [Ricinus communis]
           gi|223546103|gb|EEF47606.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 603

 Score = 85.9 bits (211), Expect = 3e-15
 Identities = 38/70 (54%), Positives = 50/70 (71%)
 Frame = +2

Query: 17  PWSLSSXXXXXXXXXWNFVDEPLMVVLDPRGTVSFTDAISMVFIWGSVAYPFATWREEQL 196
           PW L S         WNF D+PLMVVLDPRG V+ ++AI MV IWG+ A+PF++ REEQL
Sbjct: 323 PWLLHSAVVNYIKQEWNFKDDPLMVVLDPRGMVTNSNAIDMVSIWGAKAFPFSSSREEQL 382

Query: 197 WQDANWSLSW 226
           W++ +WSL +
Sbjct: 383 WEEESWSLQF 392


>ref|XP_004143056.1| PREDICTED: uncharacterized protein LOC101208559 [Cucumis sativus]
          Length = 703

 Score = 78.6 bits (192), Expect = 5e-13
 Identities = 33/73 (45%), Positives = 48/73 (65%)
 Frame = +2

Query: 2   FNTRHPWSLSSXXXXXXXXXWNFVDEPLMVVLDPRGTVSFTDAISMVFIWGSVAYPFATW 181
           ++  HP  + S         WNF+ +PL+VVLDP+G V  T+A+ M++IWGS+AYPF + 
Sbjct: 411 YSVAHPSLIESAVIKYVRQVWNFIKKPLLVVLDPQGKVVNTNAVHMLWIWGSLAYPFTSA 470

Query: 182 REEQLWQDANWSL 220
           REE LW++  W L
Sbjct: 471 REESLWKEETWRL 483


>ref|XP_002315652.1| predicted protein [Populus trichocarpa] gi|222864692|gb|EEF01823.1|
           predicted protein [Populus trichocarpa]
          Length = 663

 Score = 78.2 bits (191), Expect = 7e-13
 Identities = 32/73 (43%), Positives = 50/73 (68%)
 Frame = +2

Query: 2   FNTRHPWSLSSXXXXXXXXXWNFVDEPLMVVLDPRGTVSFTDAISMVFIWGSVAYPFATW 181
           ++ R PW L +         W++ + PL+VVLD +G VS ++A+ MVFIWG+ AYPF+T 
Sbjct: 376 YSVRRPWVLYAAVVNYIKQEWDYKNVPLIVVLDSKGMVSKSNAMDMVFIWGATAYPFSTS 435

Query: 182 REEQLWQDANWSL 220
           +E++LW + NW+L
Sbjct: 436 KEKELWDEENWTL 448


>ref|XP_002282178.2| PREDICTED: uncharacterized protein LOC100255955 [Vitis vinifera]
          Length = 693

 Score = 77.0 bits (188), Expect = 1e-12
 Identities = 33/75 (44%), Positives = 47/75 (62%)
 Frame = +2

Query: 2   FNTRHPWSLSSXXXXXXXXXWNFVDEPLMVVLDPRGTVSFTDAISMVFIWGSVAYPFATW 181
           ++ R PW L S         WNF DEP+MVVLD +G V+ ++AI M  IWG  AYPF+  
Sbjct: 400 YSVRQPWLLCSEVVTFIKQKWNFKDEPIMVVLDSQGEVTNSNAIDMALIWGDRAYPFSAS 459

Query: 182 REEQLWQDANWSLSW 226
            E++LW++  W+L +
Sbjct: 460 VEKKLWEEEKWNLQF 474


>emb|CBI16822.3| unnamed protein product [Vitis vinifera]
          Length = 721

 Score = 77.0 bits (188), Expect = 1e-12
 Identities = 33/75 (44%), Positives = 47/75 (62%)
 Frame = +2

Query: 2   FNTRHPWSLSSXXXXXXXXXWNFVDEPLMVVLDPRGTVSFTDAISMVFIWGSVAYPFATW 181
           ++ R PW L S         WNF DEP+MVVLD +G V+ ++AI M  IWG  AYPF+  
Sbjct: 420 YSVRQPWLLCSEVVTFIKQKWNFKDEPIMVVLDSQGEVTNSNAIDMALIWGDRAYPFSAS 479

Query: 182 REEQLWQDANWSLSW 226
            E++LW++  W+L +
Sbjct: 480 VEKKLWEEEKWNLQF 494


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