BLASTX nr result

ID: Coptis23_contig00033239 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00033239
         (547 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAN68458.1| hypothetical protein VITISV_031449 [Vitis vinifera]   144   7e-33
ref|XP_002519218.1| conserved hypothetical protein [Ricinus comm...   135   3e-30
ref|XP_002319925.1| predicted protein [Populus trichocarpa] gi|2...   134   1e-29
ref|XP_002329355.1| predicted protein [Populus trichocarpa] gi|2...   131   8e-29
ref|XP_002298612.1| predicted protein [Populus trichocarpa] gi|2...   130   1e-28

>emb|CAN68458.1| hypothetical protein VITISV_031449 [Vitis vinifera]
          Length = 439

 Score =  144 bits (364), Expect = 7e-33
 Identities = 82/182 (45%), Positives = 110/182 (60%)
 Frame = -1

Query: 547 SNEFVKMLLLDGCFIIELFLRYRLNDRRQKDDPIFNTSWMLTSINRDLMLLENQLPFFVL 368
           S+EFV M+LLDGCFIIELFL+ +    R +DDPIFN + +LT ++RDL+LLENQLPFFVL
Sbjct: 125 SDEFVTMMLLDGCFIIELFLKNKNKQLRDEDDPIFNRTMVLTDLHRDLILLENQLPFFVL 184

Query: 367 VNLLTFNPVDPHANPSNYLSESARSFFSGMMPIPLQMNAIVQSHKHLLDVIRNALLPPVE 188
             L           PS  + E    FF  +    + +       KHLLD++R   +PP  
Sbjct: 185 ETLFNLIENTDQEGPSTSVLELTYVFFKFLGLQEVLIRDSQPDVKHLLDLLRLWFVPPSS 244

Query: 187 ERSSQNIQKLKLVPCAMKLQQFGIKFKKGEDFNLLGIKFSNGVLEIPPLKIQDVTEPLLR 8
            +S+    K +L+    +L + G+KF+ G    L+ IKF NGVLEIPPL I+D T+ LL 
Sbjct: 245 TKSTSK-SKFELIRSVTELHEAGVKFRMGTVSCLMEIKFINGVLEIPPLTIEDTTDSLLG 303

Query: 7   NL 2
           NL
Sbjct: 304 NL 305


>ref|XP_002519218.1| conserved hypothetical protein [Ricinus communis]
           gi|223541533|gb|EEF43082.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 442

 Score =  135 bits (341), Expect = 3e-30
 Identities = 83/190 (43%), Positives = 110/190 (57%), Gaps = 8/190 (4%)
 Frame = -1

Query: 547 SNEFVKMLLLDGCFIIELFLRYRLNDRRQKDDPIFNTSWMLTSINRDLMLLENQLPFFVL 368
           SN+F+ M+L+DGCFIIEL L+Y +   R+++D IF T  ML  +  +L+LLENQ+P F+L
Sbjct: 127 SNKFLTMMLVDGCFIIELLLKYSIKSLRRRNDKIFTTPGMLFDVRCNLILLENQIPLFIL 186

Query: 367 VNLLTFNPVDPHANPSNYLSESARSFFSGMMPIPLQMN--AIVQSHKHLLDVIRNALLP- 197
             L    P+      +   +E    FF  M+P   Q+N     Q   HLLD+I + LLP 
Sbjct: 187 QRLFQVVPIPRQCIYT--FAELCFRFFRNMIPGDPQINREKFSQEAHHLLDIICHCLLPT 244

Query: 196 -----PVEERSSQNIQKLKLVPCAMKLQQFGIKFKKGEDFNLLGIKFSNGVLEIPPLKIQ 32
                P +E +S N    K +P A KLQ  GI+ KK    NLL IKF  GVLEIPP+ I 
Sbjct: 245 YPRVLPPKESNSGN----KPLPSATKLQDAGIRIKKARKLNLLDIKFDKGVLEIPPIVIH 300

Query: 31  DVTEPLLRNL 2
             TE LL+NL
Sbjct: 301 QYTETLLKNL 310


>ref|XP_002319925.1| predicted protein [Populus trichocarpa] gi|222858301|gb|EEE95848.1|
           predicted protein [Populus trichocarpa]
          Length = 360

 Score =  134 bits (336), Expect = 1e-29
 Identities = 77/183 (42%), Positives = 108/183 (59%), Gaps = 3/183 (1%)
 Frame = -1

Query: 541 EFVKMLLLDGCFIIELFLRYRLNDRRQKDDPIFNTSWMLTSINRDLMLLENQLPFFVLVN 362
           +  KMLL+DGCFI+ELFLR+ + D R +DDP+FNTSWM+ ++ RDL LLENQ+PFF L  
Sbjct: 52  DLAKMLLVDGCFILELFLRFSMADLRLQDDPVFNTSWMVLTLRRDLALLENQIPFFALEW 111

Query: 361 LLTFNPVDPHANPSNY--LSESARSFFSGMMPIPLQMNAIVQS-HKHLLDVIRNALLPPV 191
           L     V P A   +   L + A  FF   + I +   A+ +    HLL +I N  LP  
Sbjct: 112 LFKLT-VKPSAIGQSLPTLPDLAFDFFKSSLYINIGTLAVSRRIVPHLLALIHNCYLPSS 170

Query: 190 EERSSQNIQKLKLVPCAMKLQQFGIKFKKGEDFNLLGIKFSNGVLEIPPLKIQDVTEPLL 11
              + +     + + C+  L + GIKF++G   +L  +KF NGV +IPPL+I D T  L 
Sbjct: 171 SRPNPRGRGGWEFIHCSSVLLEAGIKFERGTTSSLFDLKFENGVFKIPPLRIHDSTVSLF 230

Query: 10  RNL 2
           +NL
Sbjct: 231 QNL 233


>ref|XP_002329355.1| predicted protein [Populus trichocarpa] gi|222870405|gb|EEF07536.1|
           predicted protein [Populus trichocarpa]
          Length = 433

 Score =  131 bits (329), Expect = 8e-29
 Identities = 79/187 (42%), Positives = 110/187 (58%), Gaps = 5/187 (2%)
 Frame = -1

Query: 547 SNEFVKMLLLDGCFIIELFLRYRLNDRRQKDDPIFNTSWMLTSINRDLMLLENQLPFFVL 368
           + +F KMLL DGCFI+ELFLR+  +D +++ DPIF TSWM++++ RDL LLENQ+PFFVL
Sbjct: 122 NTDFAKMLLFDGCFILELFLRFSSDDAKRQYDPIFTTSWMISTLQRDLALLENQIPFFVL 181

Query: 367 VNLLTFNPVDPHANPSNYLSESARSFFSGMMPIPLQMNAIVQSHK--HLLDVIRNALLPP 194
             L   + V   A     L E A  FF   +     + A++      HLL ++  + LP 
Sbjct: 182 TELYK-HIVRHTATDQPRLVELALRFFRPELNTNEGIGAVISGGNFCHLLGLLHTSYLPS 240

Query: 193 ---VEERSSQNIQKLKLVPCAMKLQQFGIKFKKGEDFNLLGIKFSNGVLEIPPLKIQDVT 23
              V++R        KL+ CA +L   GIKF+K    + L + F NGV +IPPL+I D T
Sbjct: 241 SLRVDQRGGAG--PWKLLSCATELCAAGIKFQKDTTKHQLDLCFENGVFKIPPLQIHDST 298

Query: 22  EPLLRNL 2
           + L RNL
Sbjct: 299 DSLFRNL 305


>ref|XP_002298612.1| predicted protein [Populus trichocarpa] gi|222845870|gb|EEE83417.1|
           predicted protein [Populus trichocarpa]
          Length = 437

 Score =  130 bits (328), Expect = 1e-28
 Identities = 80/184 (43%), Positives = 112/184 (60%), Gaps = 4/184 (2%)
 Frame = -1

Query: 541 EFVKMLLLDGCFIIELFLRYRLNDRRQKDDPIFNTSWMLTSINRDLMLLENQLPFFVLVN 362
           +FV++L++DGCF+IELF + + N RR+ DDPIFN S ML  +  DL+L+ENQ+P+ VL +
Sbjct: 138 DFVRILVIDGCFLIELFRKDQDNLRREVDDPIFNMSCMLQYLYHDLILVENQIPWLVLEH 197

Query: 361 LLTFNPVDPHANPSN--YLSESARSFFSGMMPI-PLQMNAIVQSHKHLLDVIRNAL-LPP 194
           L         A+P N   L++ A  FF  +    P  ++   Q  KHLLD++RN L L  
Sbjct: 198 LFNMT-----ADPGNATTLAQLALQFFRNIFSFHPPSIDPYYQGQKHLLDLLRNWLVLSS 252

Query: 193 VEERSSQNIQKLKLVPCAMKLQQFGIKFKKGEDFNLLGIKFSNGVLEIPPLKIQDVTEPL 14
            EE  S+     + +P    L   GIK K GE  ++L IKF NG LEIPPL +Q+ TE +
Sbjct: 253 GEEEDSET--GWEPMPSVTNLVDAGIKLKVGESRSILDIKFENGFLEIPPLLVQETTEVI 310

Query: 13  LRNL 2
           +RNL
Sbjct: 311 IRNL 314


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