BLASTX nr result

ID: Coptis23_contig00033227 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00033227
         (328 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002265303.2| PREDICTED: uncharacterized protein LOC100266...   134   8e-30
ref|XP_004158679.1| PREDICTED: LOW QUALITY PROTEIN: uncharacteri...   107   1e-21
ref|XP_004134515.1| PREDICTED: uncharacterized protein LOC101220...   107   1e-21
ref|XP_003534858.1| PREDICTED: uncharacterized protein LOC100797...   104   7e-21
ref|XP_002530123.1| hypothetical protein RCOM_0128070 [Ricinus c...   102   3e-20

>ref|XP_002265303.2| PREDICTED: uncharacterized protein LOC100266712 [Vitis vinifera]
           gi|297738186|emb|CBI27387.3| unnamed protein product
           [Vitis vinifera]
          Length = 509

 Score =  134 bits (337), Expect = 8e-30
 Identities = 63/109 (57%), Positives = 82/109 (75%), Gaps = 2/109 (1%)
 Frame = +1

Query: 7   AVIGTNRGAAMLNLETGAVSWLCHSKSDVFSLQFNESGNVMLCGFRNGGIVTVDVRQKQQ 186
           AVIGTN G A++N+ET   SW+C +KSDV SLQ ++SGNV+LCG RNG +VTVDVR+KQ+
Sbjct: 270 AVIGTNVGVALVNMETRVPSWVCRTKSDVLSLQLDQSGNVVLCGLRNGAVVTVDVREKQE 329

Query: 187 GTMV--SRHRIPFSSNTDHEDSSRNAQKRTKAWFEVKGSIHPSCTIFMP 327
           G     +RHR+P+ S+   E SSR  QK +K WFE+KG I+P  TIF+P
Sbjct: 330 GAYARHTRHRVPYPSHRISEASSRTVQKFSKQWFELKGKIYPESTIFLP 378


>ref|XP_004158679.1| PREDICTED: LOW QUALITY PROTEIN: uncharacterized protein
           LOC101230256 [Cucumis sativus]
          Length = 515

 Score =  107 bits (267), Expect = 1e-21
 Identities = 52/108 (48%), Positives = 75/108 (69%), Gaps = 1/108 (0%)
 Frame = +1

Query: 7   AVIGTNRGAAMLNLETGAVSWLCHSKSDVFSLQFNESGNVMLCGFRNGGIVTVDVRQKQQ 186
           AVIGTN GAA +++ TG +SW+ H KSD+F+LQ   S NV+LCG RNG IVT+D R++Q+
Sbjct: 276 AVIGTNIGAASVDMGTGRISWILHGKSDIFALQLIHSENVVLCGLRNGMIVTIDTRERQE 335

Query: 187 -GTMVSRHRIPFSSNTDHEDSSRNAQKRTKAWFEVKGSIHPSCTIFMP 327
            G  + RHRIP+          RN++  ++ W+++ G+I PSCT+ MP
Sbjct: 336 VGKRLLRHRIPYL-----PIDRRNSRTSSQQWYKLTGNIXPSCTVKMP 378


>ref|XP_004134515.1| PREDICTED: uncharacterized protein LOC101220880 [Cucumis sativus]
          Length = 515

 Score =  107 bits (267), Expect = 1e-21
 Identities = 52/108 (48%), Positives = 75/108 (69%), Gaps = 1/108 (0%)
 Frame = +1

Query: 7   AVIGTNRGAAMLNLETGAVSWLCHSKSDVFSLQFNESGNVMLCGFRNGGIVTVDVRQKQQ 186
           AVIGTN GAA +++ TG +SW+ H KSD+F+LQ   S NV+LCG RNG IVT+D R++Q+
Sbjct: 276 AVIGTNIGAASVDMGTGRISWILHGKSDIFALQLIHSENVVLCGLRNGMIVTIDTRERQE 335

Query: 187 -GTMVSRHRIPFSSNTDHEDSSRNAQKRTKAWFEVKGSIHPSCTIFMP 327
            G  + RHRIP+          RN++  ++ W+++ G+I PSCT+ MP
Sbjct: 336 VGKRLLRHRIPYL-----PIDRRNSRTSSQQWYKLTGNIFPSCTVKMP 378


>ref|XP_003534858.1| PREDICTED: uncharacterized protein LOC100797740, partial [Glycine
           max]
          Length = 510

 Score =  104 bits (260), Expect = 7e-21
 Identities = 56/109 (51%), Positives = 74/109 (67%), Gaps = 3/109 (2%)
 Frame = +1

Query: 7   AVIGTNRGAAMLNLETGAVSWLCHSKSDVFSLQFNESGNVMLCGFRNGGIVTVDVRQKQQ 186
           AVIGTN GAA ++LETG +SW  H KSDVF+ Q   SGNV+LCG RNG IVTVD R++++
Sbjct: 281 AVIGTNLGAASVDLETGTMSWFLHCKSDVFAQQIVNSGNVILCGLRNGAIVTVDSRERRE 340

Query: 187 ---GTMVSRHRIPFSSNTDHEDSSRNAQKRTKAWFEVKGSIHPSCTIFM 324
              G +++ HRIP++S      S +      K WF++KG I+PS TI M
Sbjct: 341 SLSGRLIT-HRIPYAS------SDKKVVGSNKEWFKLKGDIYPSHTIRM 382


>ref|XP_002530123.1| hypothetical protein RCOM_0128070 [Ricinus communis]
           gi|223530377|gb|EEF32267.1| hypothetical protein
           RCOM_0128070 [Ricinus communis]
          Length = 407

 Score =  102 bits (254), Expect = 3e-20
 Identities = 52/103 (50%), Positives = 69/103 (66%)
 Frame = +1

Query: 19  TNRGAAMLNLETGAVSWLCHSKSDVFSLQFNESGNVMLCGFRNGGIVTVDVRQKQQGTMV 198
           T+ GAA++NLETG  +W+  SKSDV + Q ++SGNV+LCG RNG IVTVDVR+     + 
Sbjct: 176 TDLGAALVNLETGTATWVLRSKSDVLAQQLDQSGNVVLCGLRNGAIVTVDVREGSAREI- 234

Query: 199 SRHRIPFSSNTDHEDSSRNAQKRTKAWFEVKGSIHPSCTIFMP 327
            RHRIP+S         R+ Q  +K WF++ G I PSCT +MP
Sbjct: 235 -RHRIPYSL------LGRSRQNSSKQWFKLSGYIDPSCTWYMP 270


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