BLASTX nr result

ID: Coptis23_contig00033223 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00033223
         (395 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002278512.2| PREDICTED: promoter-binding protein SPL9 [Vi...   144   6e-33
gb|ADG36380.1| promoter-binding protein SPL9 [Vitis vinifera]         144   6e-33
emb|CBI30036.3| unnamed protein product [Vitis vinifera]              144   6e-33
gb|AEW23126.1| SQUAMOSA promoter binding protein-like protein [F...   140   1e-31
ref|XP_002532343.1| LIGULELESS1 protein, putative [Ricinus commu...   136   2e-30

>ref|XP_002278512.2| PREDICTED: promoter-binding protein SPL9 [Vitis vinifera]
          Length = 379

 Score =  144 bits (364), Expect = 6e-33
 Identities = 72/105 (68%), Positives = 76/105 (72%), Gaps = 4/105 (3%)
 Frame = +3

Query: 63  RFHLLTEFDQGKRSCRRRLAGHNERRRKPQPGSLFSSRYGRLSPSFQENSSR-GGGFLMD 239
           RFH L EFDQGKRSCRRRLAGHNERRRKP PGSL SSRYGRLS S  ENSSR GGGFLMD
Sbjct: 128 RFHQLAEFDQGKRSCRRRLAGHNERRRKPPPGSLLSSRYGRLSSSIFENSSRVGGGFLMD 187

Query: 240 FT---RQPGRDDWPIVKTGNWADGNQPTPTGKLLPHQWQGDPENP 365
           F    R P RD WP  +  +   GNQ T  G+ LPH WQ + ENP
Sbjct: 188 FAAYPRHPERDTWPTTRASDRVPGNQTTAMGRFLPHPWQSNSENP 232


>gb|ADG36380.1| promoter-binding protein SPL9 [Vitis vinifera]
          Length = 378

 Score =  144 bits (364), Expect = 6e-33
 Identities = 72/105 (68%), Positives = 76/105 (72%), Gaps = 4/105 (3%)
 Frame = +3

Query: 63  RFHLLTEFDQGKRSCRRRLAGHNERRRKPQPGSLFSSRYGRLSPSFQENSSR-GGGFLMD 239
           RFH L EFDQGKRSCRRRLAGHNERRRKP PGSL SSRYGRLS S  ENSSR GGGFLMD
Sbjct: 127 RFHQLAEFDQGKRSCRRRLAGHNERRRKPPPGSLLSSRYGRLSSSIFENSSRVGGGFLMD 186

Query: 240 FT---RQPGRDDWPIVKTGNWADGNQPTPTGKLLPHQWQGDPENP 365
           F    R P RD WP  +  +   GNQ T  G+ LPH WQ + ENP
Sbjct: 187 FAAYPRHPERDTWPTTRASDRVPGNQTTAMGRFLPHPWQSNSENP 231


>emb|CBI30036.3| unnamed protein product [Vitis vinifera]
          Length = 349

 Score =  144 bits (364), Expect = 6e-33
 Identities = 72/105 (68%), Positives = 76/105 (72%), Gaps = 4/105 (3%)
 Frame = +3

Query: 63  RFHLLTEFDQGKRSCRRRLAGHNERRRKPQPGSLFSSRYGRLSPSFQENSSR-GGGFLMD 239
           RFH L EFDQGKRSCRRRLAGHNERRRKP PGSL SSRYGRLS S  ENSSR GGGFLMD
Sbjct: 98  RFHQLAEFDQGKRSCRRRLAGHNERRRKPPPGSLLSSRYGRLSSSIFENSSRVGGGFLMD 157

Query: 240 FT---RQPGRDDWPIVKTGNWADGNQPTPTGKLLPHQWQGDPENP 365
           F    R P RD WP  +  +   GNQ T  G+ LPH WQ + ENP
Sbjct: 158 FAAYPRHPERDTWPTTRASDRVPGNQTTAMGRFLPHPWQSNSENP 202


>gb|AEW23126.1| SQUAMOSA promoter binding protein-like protein [Fragaria x
           ananassa]
          Length = 380

 Score =  140 bits (352), Expect = 1e-31
 Identities = 71/113 (62%), Positives = 80/113 (70%), Gaps = 3/113 (2%)
 Frame = +3

Query: 63  RFHLLTEFDQGKRSCRRRLAGHNERRRKPQPGSLFSSRYGRLSPSFQENSSRGGGFLMDF 242
           RFH L EFDQGKRSCRRRLAGHNERRRKPQPGS+ S+R+GRLS S  ENS++ G FLMDF
Sbjct: 125 RFHQLPEFDQGKRSCRRRLAGHNERRRKPQPGSMMSTRFGRLSSSIYENSNQVGSFLMDF 184

Query: 243 TRQP--GRDDWPIVKTGNWADGNQP-TPTGKLLPHQWQGDPENPPAIVYSQSS 392
           T  P  GRD W   +T      NQ  T TGK L HQWQ +PEN  + +Y Q S
Sbjct: 185 TAYPRDGRDAWATARTSERPPANQTVTATGKFLQHQWQSNPENNRSNLYLQGS 237


>ref|XP_002532343.1| LIGULELESS1 protein, putative [Ricinus communis]
           gi|223527960|gb|EEF30045.1| LIGULELESS1 protein,
           putative [Ricinus communis]
          Length = 349

 Score =  136 bits (342), Expect = 2e-30
 Identities = 66/113 (58%), Positives = 77/113 (68%), Gaps = 3/113 (2%)
 Frame = +3

Query: 63  RFHLLTEFDQGKRSCRRRLAGHNERRRKPQPGSLFSSRYGRLSPSFQENSSRGGGFLMDF 242
           RFH L EFDQGKRSCRRRLAGHNERRRKP PGSL SSRY RLS +  +NSSR GGFL+DF
Sbjct: 94  RFHQLPEFDQGKRSCRRRLAGHNERRRKPPPGSLLSSRYSRLSSTVFDNSSRAGGFLVDF 153

Query: 243 TRQP---GRDDWPIVKTGNWADGNQPTPTGKLLPHQWQGDPENPPAIVYSQSS 392
           +  P    RD WP  +      GN  T  G+ +P+ WQ   +NPP+ +Y Q S
Sbjct: 154 SAYPRLSARDAWPSARPSERVPGNHTTGAGRSIPNPWQTSSQNPPSNLYLQGS 206


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