BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00033221
         (513 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI30094.3| unnamed protein product [Vitis vinifera]              277   7e-73
ref|XP_003632690.1| PREDICTED: pentatricopeptide repeat-containi...   277   7e-73
ref|XP_002322628.1| predicted protein [Populus trichocarpa] gi|2...   255   3e-66
ref|XP_004166467.1| PREDICTED: LOW QUALITY PROTEIN: pentatricope...   253   9e-66
ref|XP_004136647.1| PREDICTED: pentatricopeptide repeat-containi...   253   9e-66

>emb|CBI30094.3| unnamed protein product [Vitis vinifera]
          Length = 614

 Score =  277 bits (708), Expect = 7e-73
 Identities = 132/170 (77%), Positives = 154/170 (90%)
 Frame = +3

Query: 3   AILLMEEMQESGFKPNDVTYIGVLSACSHSGLVEEGLKYFDELVKVESIKLREDHYACLV 182
           AI   +EM++SGFKP+DVTY+G+LSACSH+GLVEEGLKYFDELVK  SI +REDHYACLV
Sbjct: 403 AINFFKEMRKSGFKPDDVTYVGLLSACSHAGLVEEGLKYFDELVKDRSILVREDHYACLV 462

Query: 183 DLCGRAGRLEEAFDITKKLGSKASACVWGALLAGCNVHGNVRLGRLAANKLLQVEPENAG 362
           DLCGRAGRL+EAF   ++L +K SA VWGALLAGCNVH NV++G+ AA KLL+VEPENAG
Sbjct: 463 DLCGRAGRLKEAFGFIERLETKPSARVWGALLAGCNVHANVKIGKQAAKKLLEVEPENAG 522

Query: 363 TYMLLSNIYASTGKWKEASKLRLKMKDKGLKKQPGCSWIEVENRVNVFVV 512
           TY+LLSNIYASTGKW+EA+++RLKMKDKGLKKQPGCSWIEV NRV+VFVV
Sbjct: 523 TYLLLSNIYASTGKWREAARVRLKMKDKGLKKQPGCSWIEVGNRVHVFVV 572


>ref|XP_003632690.1| PREDICTED: pentatricopeptide repeat-containing protein At2g35030,
           mitochondrial-like [Vitis vinifera]
          Length = 635

 Score =  277 bits (708), Expect = 7e-73
 Identities = 132/170 (77%), Positives = 154/170 (90%)
 Frame = +3

Query: 3   AILLMEEMQESGFKPNDVTYIGVLSACSHSGLVEEGLKYFDELVKVESIKLREDHYACLV 182
           AI   +EM++SGFKP+DVTY+G+LSACSH+GLVEEGLKYFDELVK  SI +REDHYACLV
Sbjct: 424 AINFFKEMRKSGFKPDDVTYVGLLSACSHAGLVEEGLKYFDELVKDRSILVREDHYACLV 483

Query: 183 DLCGRAGRLEEAFDITKKLGSKASACVWGALLAGCNVHGNVRLGRLAANKLLQVEPENAG 362
           DLCGRAGRL+EAF   ++L +K SA VWGALLAGCNVH NV++G+ AA KLL+VEPENAG
Sbjct: 484 DLCGRAGRLKEAFGFIERLETKPSARVWGALLAGCNVHANVKIGKQAAKKLLEVEPENAG 543

Query: 363 TYMLLSNIYASTGKWKEASKLRLKMKDKGLKKQPGCSWIEVENRVNVFVV 512
           TY+LLSNIYASTGKW+EA+++RLKMKDKGLKKQPGCSWIEV NRV+VFVV
Sbjct: 544 TYLLLSNIYASTGKWREAARVRLKMKDKGLKKQPGCSWIEVGNRVHVFVV 593


>ref|XP_002322628.1| predicted protein [Populus trichocarpa] gi|222867258|gb|EEF04389.1|
           predicted protein [Populus trichocarpa]
          Length = 559

 Score =  255 bits (651), Expect = 3e-66
 Identities = 119/169 (70%), Positives = 148/169 (87%)
 Frame = +3

Query: 3   AILLMEEMQESGFKPNDVTYIGVLSACSHSGLVEEGLKYFDELVKVESIKLREDHYACLV 182
           AI L E+MQ  GFKPNDV+Y+ +LSACSH+GLV+EGL YFDEL +  SI+LREDH+ACLV
Sbjct: 347 AIELFEDMQGLGFKPNDVSYVELLSACSHAGLVDEGLNYFDELGRDNSIQLREDHHACLV 406

Query: 183 DLCGRAGRLEEAFDITKKLGSKASACVWGALLAGCNVHGNVRLGRLAANKLLQVEPENAG 362
           DLCGRAGRL+EA+D  K+LG+KAS+ +WG LLAGCN HG++ +G+LAA +L + +PENAG
Sbjct: 407 DLCGRAGRLKEAYDFIKQLGTKASSSIWGGLLAGCNAHGDLEIGQLAAKELEKEDPENAG 466

Query: 363 TYMLLSNIYASTGKWKEASKLRLKMKDKGLKKQPGCSWIEVENRVNVFV 509
           TY+LLSNIYAS  KW+EAS++RLKMK+KGLKKQPGCSWIEV NRV+VF+
Sbjct: 467 TYLLLSNIYASGRKWREASRVRLKMKEKGLKKQPGCSWIEVGNRVHVFL 515


>ref|XP_004166467.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
           protein At2g35030, mitochondrial-like [Cucumis sativus]
          Length = 649

 Score =  253 bits (647), Expect = 9e-66
 Identities = 122/170 (71%), Positives = 144/170 (84%)
 Frame = +3

Query: 3   AILLMEEMQESGFKPNDVTYIGVLSACSHSGLVEEGLKYFDELVKVESIKLREDHYACLV 182
           AI L +EMQ  GF+P++VTYI +LSACSH+GLV+EGLK F+ LV+  SIKLREDH+ CLV
Sbjct: 438 AISLFDEMQALGFRPDNVTYIALLSACSHAGLVDEGLKLFENLVRDRSIKLREDHFTCLV 497

Query: 183 DLCGRAGRLEEAFDITKKLGSKASACVWGALLAGCNVHGNVRLGRLAANKLLQVEPENAG 362
           DL GRAGRL+EAFD  K L  K SA VW ALLAGCNVHG++ LG+L A KLL+ EPENAG
Sbjct: 498 DLFGRAGRLQEAFDFIKGLEVKPSASVWAALLAGCNVHGHIDLGKLTAEKLLETEPENAG 557

Query: 363 TYMLLSNIYASTGKWKEASKLRLKMKDKGLKKQPGCSWIEVENRVNVFVV 512
           TY++LSNIYASTGKW+EA+ +R+KMKDKGLKKQPGCSWIEV N V+VFVV
Sbjct: 558 TYLVLSNIYASTGKWREAAGVRMKMKDKGLKKQPGCSWIEVGNTVHVFVV 607


>ref|XP_004136647.1| PREDICTED: pentatricopeptide repeat-containing protein At2g35030,
           mitochondrial-like [Cucumis sativus]
          Length = 649

 Score =  253 bits (647), Expect = 9e-66
 Identities = 122/170 (71%), Positives = 144/170 (84%)
 Frame = +3

Query: 3   AILLMEEMQESGFKPNDVTYIGVLSACSHSGLVEEGLKYFDELVKVESIKLREDHYACLV 182
           AI L +EMQ  GF+P++VTYI +LSACSH+GLV+EGLK F+ LV+  SIKLREDH+ CLV
Sbjct: 438 AISLFDEMQALGFRPDNVTYIALLSACSHAGLVDEGLKLFENLVRDRSIKLREDHFTCLV 497

Query: 183 DLCGRAGRLEEAFDITKKLGSKASACVWGALLAGCNVHGNVRLGRLAANKLLQVEPENAG 362
           DL GRAGRL+EAFD  K L  K SA VW ALLAGCNVHG++ LG+L A KLL+ EPENAG
Sbjct: 498 DLFGRAGRLQEAFDFIKGLEVKPSASVWAALLAGCNVHGHIDLGKLTAEKLLETEPENAG 557

Query: 363 TYMLLSNIYASTGKWKEASKLRLKMKDKGLKKQPGCSWIEVENRVNVFVV 512
           TY++LSNIYASTGKW+EA+ +R+KMKDKGLKKQPGCSWIEV N V+VFVV
Sbjct: 558 TYLVLSNIYASTGKWREAAGVRMKMKDKGLKKQPGCSWIEVGNTVHVFVV 607