BLASTX nr result

ID: Coptis23_contig00033219 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00033219
         (379 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003543854.1| PREDICTED: uncharacterized protein LOC100780...    75   5e-19
ref|XP_002443435.1| hypothetical protein SORBIDRAFT_08g019436 [S...    67   7e-16
ref|XP_002443211.1| hypothetical protein SORBIDRAFT_08g015460 [S...    67   1e-15
ref|XP_002458511.1| hypothetical protein SORBIDRAFT_03g034920 [S...    65   2e-15
ref|XP_002443644.1| hypothetical protein SORBIDRAFT_08g022750 [S...    65   2e-15

>ref|XP_003543854.1| PREDICTED: uncharacterized protein LOC100780312 [Glycine max]
          Length = 557

 Score = 74.7 bits (182), Expect(2) = 5e-19
 Identities = 29/44 (65%), Positives = 35/44 (79%)
 Frame = -2

Query: 207 GYMEPNVWWVSYGTTMPLLQSLALKLVGQPCSSSCCERNWSTYS 76
           G M+P  WW+ +G   P+LQ +ALKL+ QPCSSSCCERNWSTYS
Sbjct: 434 GQMDPKAWWLVHGINAPILQKIALKLLAQPCSSSCCERNWSTYS 477



 Score = 44.3 bits (103), Expect(2) = 5e-19
 Identities = 20/24 (83%), Positives = 22/24 (91%)
 Frame = -1

Query: 73  INSLKRNKITPQRGEDLVFVHSNL 2
           I+SLKRNK+TP R EDLVFVHSNL
Sbjct: 479 IHSLKRNKMTPHRAEDLVFVHSNL 502


>ref|XP_002443435.1| hypothetical protein SORBIDRAFT_08g019436 [Sorghum bicolor]
           gi|241944128|gb|EES17273.1| hypothetical protein
           SORBIDRAFT_08g019436 [Sorghum bicolor]
          Length = 246

 Score = 66.6 bits (161), Expect(2) = 7e-16
 Identities = 26/42 (61%), Positives = 32/42 (76%)
 Frame = -2

Query: 201 MEPNVWWVSYGTTMPLLQSLALKLVGQPCSSSCCERNWSTYS 76
           + P  WW ++G   P+L SLA+KL+ QP SSSCCERNWSTYS
Sbjct: 110 ISPMTWWTNHGQAAPMLMSLAMKLLSQPASSSCCERNWSTYS 151



 Score = 42.0 bits (97), Expect(2) = 7e-16
 Identities = 18/24 (75%), Positives = 22/24 (91%)
 Frame = -1

Query: 73  INSLKRNKITPQRGEDLVFVHSNL 2
           I+SLKRN +TP+R EDLVFVH+NL
Sbjct: 153 IHSLKRNALTPERAEDLVFVHTNL 176


>ref|XP_002443211.1| hypothetical protein SORBIDRAFT_08g015460 [Sorghum bicolor]
           gi|241943904|gb|EES17049.1| hypothetical protein
           SORBIDRAFT_08g015460 [Sorghum bicolor]
          Length = 698

 Score = 66.6 bits (161), Expect(2) = 1e-15
 Identities = 26/42 (61%), Positives = 32/42 (76%)
 Frame = -2

Query: 201 MEPNVWWVSYGTTMPLLQSLALKLVGQPCSSSCCERNWSTYS 76
           + P  WW ++G   P+L SLA+KL+ QP SSSCCERNWSTYS
Sbjct: 522 VSPMTWWTNHGQAAPMLMSLAMKLLSQPASSSCCERNWSTYS 563



 Score = 40.8 bits (94), Expect(2) = 1e-15
 Identities = 17/24 (70%), Positives = 22/24 (91%)
 Frame = -1

Query: 73  INSLKRNKITPQRGEDLVFVHSNL 2
           I+S+KRN +TP+R EDLVFVH+NL
Sbjct: 565 IHSVKRNALTPERAEDLVFVHTNL 588


>ref|XP_002458511.1| hypothetical protein SORBIDRAFT_03g034920 [Sorghum bicolor]
           gi|241930486|gb|EES03631.1| hypothetical protein
           SORBIDRAFT_03g034920 [Sorghum bicolor]
          Length = 687

 Score = 65.5 bits (158), Expect(2) = 2e-15
 Identities = 26/42 (61%), Positives = 32/42 (76%)
 Frame = -2

Query: 201 MEPNVWWVSYGTTMPLLQSLALKLVGQPCSSSCCERNWSTYS 76
           + P  WW ++G + P L SLA+KL+ QP SSSCCERNWSTYS
Sbjct: 550 VSPMTWWTNHGQSAPQLMSLAMKLLSQPASSSCCERNWSTYS 591



 Score = 41.6 bits (96), Expect(2) = 2e-15
 Identities = 17/24 (70%), Positives = 22/24 (91%)
 Frame = -1

Query: 73  INSLKRNKITPQRGEDLVFVHSNL 2
           ++S+KRN +TP+R EDLVFVHSNL
Sbjct: 593 VHSVKRNALTPERAEDLVFVHSNL 616


>ref|XP_002443644.1| hypothetical protein SORBIDRAFT_08g022750 [Sorghum bicolor]
           gi|241944337|gb|EES17482.1| hypothetical protein
           SORBIDRAFT_08g022750 [Sorghum bicolor]
          Length = 684

 Score = 65.5 bits (158), Expect(2) = 2e-15
 Identities = 26/42 (61%), Positives = 32/42 (76%)
 Frame = -2

Query: 201 MEPNVWWVSYGTTMPLLQSLALKLVGQPCSSSCCERNWSTYS 76
           + P  WW ++G + P L SLA+KL+ QP SSSCCERNWSTYS
Sbjct: 547 VSPMTWWTNHGQSAPQLMSLAMKLLSQPASSSCCERNWSTYS 588



 Score = 41.2 bits (95), Expect(2) = 2e-15
 Identities = 17/24 (70%), Positives = 22/24 (91%)
 Frame = -1

Query: 73  INSLKRNKITPQRGEDLVFVHSNL 2
           ++S+KRN +TP+R EDLVFVHSNL
Sbjct: 590 VHSVKRNVLTPERAEDLVFVHSNL 613


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