BLASTX nr result

ID: Coptis23_contig00033215 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00033215
         (579 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003554390.1| PREDICTED: ABC transporter B family member 1...   289   3e-76
ref|XP_003554389.1| PREDICTED: ABC transporter B family member 1...   289   3e-76
ref|XP_003520656.1| PREDICTED: ABC transporter B family member 1...   288   5e-76
ref|XP_004173771.1| PREDICTED: ABC transporter B family member 1...   288   6e-76
ref|XP_004137839.1| PREDICTED: ABC transporter B family member 1...   288   6e-76

>ref|XP_003554390.1| PREDICTED: ABC transporter B family member 1-like isoform 2
           [Glycine max]
          Length = 1324

 Score =  289 bits (739), Expect = 3e-76
 Identities = 138/174 (79%), Positives = 157/174 (90%)
 Frame = -2

Query: 524 EEKPSATLPSVGFGQLFRFSDKLDYVLMAIGSIGAIVHGCSLPIFLRFFADLVNSFGANA 345
           E+K   ++PSVGFG+LFRF+D LDYVLM IG++GA+VHGCSLP+FLRFFADLVNSFG+NA
Sbjct: 67  EKKEKESVPSVGFGELFRFADGLDYVLMGIGTVGAVVHGCSLPLFLRFFADLVNSFGSNA 126

Query: 344 NNVDKMMQQVLKYAFYFLVVGXXXXXXXXXXXSCWMWTGERQTTKMRIKYLEAALNQDVQ 165
           N+VDKM Q+V+KYAFYFLVVG           SCWMW+GERQ+TKMRIKYLEAALNQD+Q
Sbjct: 127 NDVDKMTQEVVKYAFYFLVVGAAIWASSWAEISCWMWSGERQSTKMRIKYLEAALNQDIQ 186

Query: 164 YFDTEVRTSDVIFAINTDAVLVQDAISEKLGNFIHYMATFVSGFVVGFTAVWQL 3
           +FDTEVRTSDV+FAINTDAV+VQDAISEKLGNFIHYMATFVSGFVVGFTAVWQL
Sbjct: 187 FFDTEVRTSDVVFAINTDAVMVQDAISEKLGNFIHYMATFVSGFVVGFTAVWQL 240


>ref|XP_003554389.1| PREDICTED: ABC transporter B family member 1-like isoform 1
           [Glycine max]
          Length = 1339

 Score =  289 bits (739), Expect = 3e-76
 Identities = 138/174 (79%), Positives = 157/174 (90%)
 Frame = -2

Query: 524 EEKPSATLPSVGFGQLFRFSDKLDYVLMAIGSIGAIVHGCSLPIFLRFFADLVNSFGANA 345
           E+K   ++PSVGFG+LFRF+D LDYVLM IG++GA+VHGCSLP+FLRFFADLVNSFG+NA
Sbjct: 67  EKKEKESVPSVGFGELFRFADGLDYVLMGIGTVGAVVHGCSLPLFLRFFADLVNSFGSNA 126

Query: 344 NNVDKMMQQVLKYAFYFLVVGXXXXXXXXXXXSCWMWTGERQTTKMRIKYLEAALNQDVQ 165
           N+VDKM Q+V+KYAFYFLVVG           SCWMW+GERQ+TKMRIKYLEAALNQD+Q
Sbjct: 127 NDVDKMTQEVVKYAFYFLVVGAAIWASSWAEISCWMWSGERQSTKMRIKYLEAALNQDIQ 186

Query: 164 YFDTEVRTSDVIFAINTDAVLVQDAISEKLGNFIHYMATFVSGFVVGFTAVWQL 3
           +FDTEVRTSDV+FAINTDAV+VQDAISEKLGNFIHYMATFVSGFVVGFTAVWQL
Sbjct: 187 FFDTEVRTSDVVFAINTDAVMVQDAISEKLGNFIHYMATFVSGFVVGFTAVWQL 240


>ref|XP_003520656.1| PREDICTED: ABC transporter B family member 1-like [Glycine max]
          Length = 1342

 Score =  288 bits (737), Expect = 5e-76
 Identities = 142/200 (71%), Positives = 164/200 (82%), Gaps = 13/200 (6%)
 Frame = -2

Query: 563 MEVSKGKNKDAI-------------QEEKPSATLPSVGFGQLFRFSDKLDYVLMAIGSIG 423
           M  S+  NKD +             ++EK   ++PSVGFG+LFRF+D LDYVLM IG++G
Sbjct: 44  MNTSEPPNKDVVGASSSSAAVTNGEKKEKEKESVPSVGFGELFRFADGLDYVLMGIGTVG 103

Query: 422 AIVHGCSLPIFLRFFADLVNSFGANANNVDKMMQQVLKYAFYFLVVGXXXXXXXXXXXSC 243
           A+VHGCSLP+FLRFFADLVNSFG+NAN+VDKM Q+V+KYAFYFLVVG           SC
Sbjct: 104 AVVHGCSLPLFLRFFADLVNSFGSNANDVDKMTQEVVKYAFYFLVVGAAIWASSWAEISC 163

Query: 242 WMWTGERQTTKMRIKYLEAALNQDVQYFDTEVRTSDVIFAINTDAVLVQDAISEKLGNFI 63
           WMW+GERQ+T MRIKYLEAALNQD+Q+FDTEVRTSDV+FAINTDAV+VQDAISEKLGNFI
Sbjct: 164 WMWSGERQSTTMRIKYLEAALNQDIQFFDTEVRTSDVVFAINTDAVMVQDAISEKLGNFI 223

Query: 62  HYMATFVSGFVVGFTAVWQL 3
           HYMATFVSGFVVGFTAVWQL
Sbjct: 224 HYMATFVSGFVVGFTAVWQL 243


>ref|XP_004173771.1| PREDICTED: ABC transporter B family member 1-like [Cucumis sativus]
          Length = 384

 Score =  288 bits (736), Expect = 6e-76
 Identities = 141/173 (81%), Positives = 157/173 (90%)
 Frame = -2

Query: 521 EKPSATLPSVGFGQLFRFSDKLDYVLMAIGSIGAIVHGCSLPIFLRFFADLVNSFGANAN 342
           EKP A + ++GFG+LFRF+D LDYVLMAIGS+GA+VHGCSLP+FLRFFADLVNSFG+ AN
Sbjct: 90  EKPEA-VTAIGFGELFRFADGLDYVLMAIGSVGALVHGCSLPLFLRFFADLVNSFGSYAN 148

Query: 341 NVDKMMQQVLKYAFYFLVVGXXXXXXXXXXXSCWMWTGERQTTKMRIKYLEAALNQDVQY 162
           +VDKMMQ+VLKYAFYFLVVG           SCWMWTGERQ+TKMRIKYLEAAL+QD+QY
Sbjct: 149 DVDKMMQEVLKYAFYFLVVGAAIWASSWAEISCWMWTGERQSTKMRIKYLEAALDQDIQY 208

Query: 161 FDTEVRTSDVIFAINTDAVLVQDAISEKLGNFIHYMATFVSGFVVGFTAVWQL 3
           FDTEVRTSDV+FAINTDAV+VQDAISEKLGNFIHYMATFVSGFVVGFTAVWQL
Sbjct: 209 FDTEVRTSDVVFAINTDAVMVQDAISEKLGNFIHYMATFVSGFVVGFTAVWQL 261


>ref|XP_004137839.1| PREDICTED: ABC transporter B family member 1-like [Cucumis sativus]
          Length = 1361

 Score =  288 bits (736), Expect = 6e-76
 Identities = 141/173 (81%), Positives = 157/173 (90%)
 Frame = -2

Query: 521 EKPSATLPSVGFGQLFRFSDKLDYVLMAIGSIGAIVHGCSLPIFLRFFADLVNSFGANAN 342
           EKP A + ++GFG+LFRF+D LDYVLMAIGS+GA+VHGCSLP+FLRFFADLVNSFG+ AN
Sbjct: 90  EKPEA-VTAIGFGELFRFADGLDYVLMAIGSVGALVHGCSLPLFLRFFADLVNSFGSYAN 148

Query: 341 NVDKMMQQVLKYAFYFLVVGXXXXXXXXXXXSCWMWTGERQTTKMRIKYLEAALNQDVQY 162
           +VDKMMQ+VLKYAFYFLVVG           SCWMWTGERQ+TKMRIKYLEAAL+QD+QY
Sbjct: 149 DVDKMMQEVLKYAFYFLVVGAAIWASSWAEISCWMWTGERQSTKMRIKYLEAALDQDIQY 208

Query: 161 FDTEVRTSDVIFAINTDAVLVQDAISEKLGNFIHYMATFVSGFVVGFTAVWQL 3
           FDTEVRTSDV+FAINTDAV+VQDAISEKLGNFIHYMATFVSGFVVGFTAVWQL
Sbjct: 209 FDTEVRTSDVVFAINTDAVMVQDAISEKLGNFIHYMATFVSGFVVGFTAVWQL 261


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