BLASTX nr result

ID: Coptis23_contig00033213 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00033213
         (397 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002263597.2| PREDICTED: AP2-like ethylene-responsive tran...    88   8e-16
emb|CAN71938.1| hypothetical protein VITISV_038909 [Vitis vinifera]    88   8e-16
ref|XP_002533578.1| conserved hypothetical protein [Ricinus comm...    83   3e-14
ref|XP_002285467.2| PREDICTED: AP2-like ethylene-responsive tran...    82   5e-14
emb|CAN60401.1| hypothetical protein VITISV_034131 [Vitis vinifera]    82   5e-14

>ref|XP_002263597.2| PREDICTED: AP2-like ethylene-responsive transcription factor
           ANT-like [Vitis vinifera]
          Length = 653

 Score = 87.8 bits (216), Expect = 8e-16
 Identities = 43/59 (72%), Positives = 46/59 (77%), Gaps = 1/59 (1%)
 Frame = +2

Query: 2   SSREGSPDKNGLSMLFARPPSGSKFL-NPATSMNSWIPSAQLRSAESMPHMPMFAAWTD 175
           SSREGSPDK  L MLFA PPS  KF   PA ++NSWIPSAQLR A  MPHMP+FAAWTD
Sbjct: 594 SSREGSPDKTSLPMLFAIPPSAPKFFATPANTVNSWIPSAQLRPAIPMPHMPVFAAWTD 652


>emb|CAN71938.1| hypothetical protein VITISV_038909 [Vitis vinifera]
          Length = 908

 Score = 87.8 bits (216), Expect = 8e-16
 Identities = 43/59 (72%), Positives = 46/59 (77%), Gaps = 1/59 (1%)
 Frame = +2

Query: 2    SSREGSPDKNGLSMLFARPPSGSKFL-NPATSMNSWIPSAQLRSAESMPHMPMFAAWTD 175
            SSREGSPDK  L MLFA PPS  KF   PA ++NSWIPSAQLR A  MPHMP+FAAWTD
Sbjct: 849  SSREGSPDKTSLPMLFAIPPSAPKFFATPANTVNSWIPSAQLRPAIPMPHMPVFAAWTD 907


>ref|XP_002533578.1| conserved hypothetical protein [Ricinus communis]
           gi|223526555|gb|EEF28813.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 610

 Score = 82.8 bits (203), Expect = 3e-14
 Identities = 39/61 (63%), Positives = 49/61 (80%), Gaps = 3/61 (4%)
 Frame = +2

Query: 2   SSREGSPDKNGLSMLFARPPSGSKFL---NPATSMNSWIPSAQLRSAESMPHMPMFAAWT 172
           SSREGSPD+  L MLFA PPS +  L   +P+++MNSWIP+AQLR A ++PHMP+FAAWT
Sbjct: 549 SSREGSPDRASLPMLFAMPPSATSKLYSTSPSSNMNSWIPTAQLRPAVTLPHMPVFAAWT 608

Query: 173 D 175
           D
Sbjct: 609 D 609


>ref|XP_002285467.2| PREDICTED: AP2-like ethylene-responsive transcription factor
           ANT-like [Vitis vinifera]
          Length = 674

 Score = 82.0 bits (201), Expect = 5e-14
 Identities = 37/60 (61%), Positives = 49/60 (81%), Gaps = 1/60 (1%)
 Frame = +2

Query: 2   SSREGSPDKNGLSMLFARPPSGSKFLNPATSMNSWIPSAQLRSAE-SMPHMPMFAAWTDT 178
           SSRE SPDK G +MLFA+PP  SK + PA++++SWIP++QLR+A  SM H+P+FAAW DT
Sbjct: 615 SSREASPDKTGPAMLFAKPPLASKLMGPASALSSWIPTSQLRTAAVSMAHLPLFAAWNDT 674


>emb|CAN60401.1| hypothetical protein VITISV_034131 [Vitis vinifera]
          Length = 629

 Score = 82.0 bits (201), Expect = 5e-14
 Identities = 37/60 (61%), Positives = 49/60 (81%), Gaps = 1/60 (1%)
 Frame = +2

Query: 2   SSREGSPDKNGLSMLFARPPSGSKFLNPATSMNSWIPSAQLRSAE-SMPHMPMFAAWTDT 178
           SSRE SPDK G +MLFA+PP  SK + PA++++SWIP++QLR+A  SM H+P+FAAW DT
Sbjct: 570 SSREASPDKTGPAMLFAKPPLASKLMGPASALSSWIPTSQLRTAAVSMAHLPLFAAWNDT 629


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