BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00033208
         (557 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002525890.1| WD-repeat protein, putative [Ricinus communi...   331   5e-89
ref|XP_002321070.1| predicted protein [Populus trichocarpa] gi|2...   330   7e-89
ref|XP_002282499.1| PREDICTED: actin-related protein 2/3 complex...   329   2e-88
ref|XP_004140136.1| PREDICTED: actin-related protein 2/3 complex...   325   3e-87
gb|AFP72374.1| actin-related protein component 1 [Lotus japonicus]    323   1e-86

>ref|XP_002525890.1| WD-repeat protein, putative [Ricinus communis]
           gi|223534804|gb|EEF36494.1| WD-repeat protein, putative
           [Ricinus communis]
          Length = 386

 Score =  331 bits (848), Expect = 5e-89
 Identities = 148/171 (86%), Positives = 158/171 (92%)
 Frame = -2

Query: 514 AIEVHQFAQCITCHAWSPDQTMVAFCPNNTEVHIYNKSSQGKWERVHILQKHDQIVSGID 335
           AI VHQFAQCITCHAWSPD +M+A CPNN EVHIY  S + KWERVH+LQKHDQIVSGID
Sbjct: 3   AISVHQFAQCITCHAWSPDHSMIALCPNNNEVHIYKSSPEDKWERVHVLQKHDQIVSGID 62

Query: 334 WSTRSNKIVTVSHDRNSYVWNQEASEWVPTLVILRLNRAALCVKWSPKENKFAVGSGAKT 155
           WS R N+IVT SHDRNSYVWN+E +EWVPTLVILRLNRAALCV+WSPKENKFAVGSGAKT
Sbjct: 63  WSVRCNRIVTASHDRNSYVWNREGAEWVPTLVILRLNRAALCVQWSPKENKFAVGSGAKT 122

Query: 154 VCICYYEQDNNWWVSKLIRKKHSSSVTSVAWHPNNILLATTSTDGKCRIFS 2
           VCICYYEQDNNWWVSKLIRK+H SSVTSVAWHPNNILLATTSTDGKCR+FS
Sbjct: 123 VCICYYEQDNNWWVSKLIRKRHDSSVTSVAWHPNNILLATTSTDGKCRVFS 173


>ref|XP_002321070.1| predicted protein [Populus trichocarpa] gi|222861843|gb|EEE99385.1|
           predicted protein [Populus trichocarpa]
          Length = 378

 Score =  330 bits (847), Expect = 7e-89
 Identities = 150/171 (87%), Positives = 161/171 (94%)
 Frame = -2

Query: 514 AIEVHQFAQCITCHAWSPDQTMVAFCPNNTEVHIYNKSSQGKWERVHILQKHDQIVSGID 335
           A+EVHQFAQCITCHAWS D++M+AFCPNN EVHIY + SQ KWE+VH+LQKHDQIV GID
Sbjct: 3   AVEVHQFAQCITCHAWSADRSMIAFCPNNNEVHIY-RLSQDKWEKVHVLQKHDQIVCGID 61

Query: 334 WSTRSNKIVTVSHDRNSYVWNQEASEWVPTLVILRLNRAALCVKWSPKENKFAVGSGAKT 155
           WS RSN+IVT SHDRNSYVWNQE SEWVPTLVILRLNRAALCV+WSPKENKFAVGSGAKT
Sbjct: 62  WSARSNRIVTASHDRNSYVWNQEGSEWVPTLVILRLNRAALCVQWSPKENKFAVGSGAKT 121

Query: 154 VCICYYEQDNNWWVSKLIRKKHSSSVTSVAWHPNNILLATTSTDGKCRIFS 2
           VCICYYEQDNNWWVSKLIRK+H SSVTSVAWHPNNILLATTSTDGKCR+FS
Sbjct: 122 VCICYYEQDNNWWVSKLIRKRHDSSVTSVAWHPNNILLATTSTDGKCRVFS 172


>ref|XP_002282499.1| PREDICTED: actin-related protein 2/3 complex subunit 1 [Vitis
           vinifera] gi|302143485|emb|CBI22046.3| unnamed protein
           product [Vitis vinifera]
          Length = 378

 Score =  329 bits (843), Expect = 2e-88
 Identities = 150/171 (87%), Positives = 162/171 (94%)
 Frame = -2

Query: 514 AIEVHQFAQCITCHAWSPDQTMVAFCPNNTEVHIYNKSSQGKWERVHILQKHDQIVSGID 335
           AI VHQFA+CITCHAWSPD +MVA CPN+ EVHIY KS Q KWERVH+LQKHDQIVSGID
Sbjct: 3   AISVHQFAKCITCHAWSPDHSMVALCPNSDEVHIYRKS-QDKWERVHVLQKHDQIVSGID 61

Query: 334 WSTRSNKIVTVSHDRNSYVWNQEASEWVPTLVILRLNRAALCVKWSPKENKFAVGSGAKT 155
           WS RSN+IVTVSHDRNSYVWNQEA+EWVPTLVILRLNRAALCV+WSP+ENKFAVGSGAKT
Sbjct: 62  WSARSNRIVTVSHDRNSYVWNQEAAEWVPTLVILRLNRAALCVQWSPRENKFAVGSGAKT 121

Query: 154 VCICYYEQDNNWWVSKLIRKKHSSSVTSVAWHPNNILLATTSTDGKCRIFS 2
           VCICYYEQ+NNWWVSKLIRK+H+SSVT VAWHPNNILLATTSTDGKCR+FS
Sbjct: 122 VCICYYEQENNWWVSKLIRKRHNSSVTGVAWHPNNILLATTSTDGKCRVFS 172


>ref|XP_004140136.1| PREDICTED: actin-related protein 2/3 complex subunit 1-like
           [Cucumis sativus] gi|449481091|ref|XP_004156079.1|
           PREDICTED: actin-related protein 2/3 complex subunit
           1-like [Cucumis sativus]
          Length = 379

 Score =  325 bits (833), Expect = 3e-87
 Identities = 148/171 (86%), Positives = 158/171 (92%)
 Frame = -2

Query: 514 AIEVHQFAQCITCHAWSPDQTMVAFCPNNTEVHIYNKSSQGKWERVHILQKHDQIVSGID 335
           AI VHQFA CITCHAWSPD +MVAFCPNN EVHIY KS Q  WERVH+LQKHDQ++SGID
Sbjct: 3   AIAVHQFAHCITCHAWSPDHSMVAFCPNNNEVHIY-KSLQDNWERVHVLQKHDQLISGID 61

Query: 334 WSTRSNKIVTVSHDRNSYVWNQEASEWVPTLVILRLNRAALCVKWSPKENKFAVGSGAKT 155
           WS RSN+IVT SHDRNSYVWN E SEWVPTLVILRLNRAALCV+WSPKENKFAVGSGAKT
Sbjct: 62  WSVRSNRIVTASHDRNSYVWNLEGSEWVPTLVILRLNRAALCVQWSPKENKFAVGSGAKT 121

Query: 154 VCICYYEQDNNWWVSKLIRKKHSSSVTSVAWHPNNILLATTSTDGKCRIFS 2
           VCICYYEQ+NNWWVSKLIRK+H SSVT+VAWHPNN+LLATTSTDGKCRIFS
Sbjct: 122 VCICYYEQENNWWVSKLIRKRHDSSVTNVAWHPNNLLLATTSTDGKCRIFS 172


>gb|AFP72374.1| actin-related protein component 1 [Lotus japonicus]
          Length = 376

 Score =  323 bits (828), Expect = 1e-86
 Identities = 146/168 (86%), Positives = 158/168 (94%)
 Frame = -2

Query: 505 VHQFAQCITCHAWSPDQTMVAFCPNNTEVHIYNKSSQGKWERVHILQKHDQIVSGIDWST 326
           VHQFAQCITCHAWSPDQ+MVA CPNN EVHIY +  + KWE+VH+LQKHDQ+VSGIDWST
Sbjct: 6   VHQFAQCITCHAWSPDQSMVALCPNNNEVHIY-RLVEDKWEKVHVLQKHDQVVSGIDWST 64

Query: 325 RSNKIVTVSHDRNSYVWNQEASEWVPTLVILRLNRAALCVKWSPKENKFAVGSGAKTVCI 146
           RSN+IVT SHDRNSYVWN E SEWVPTLVILRLNRAALCV+WSPKENKFAVGSGAKTVCI
Sbjct: 65  RSNRIVTASHDRNSYVWNLEGSEWVPTLVILRLNRAALCVQWSPKENKFAVGSGAKTVCI 124

Query: 145 CYYEQDNNWWVSKLIRKKHSSSVTSVAWHPNNILLATTSTDGKCRIFS 2
           CYYEQ+NNWWVSKLIRK+H SSVTSV+WHPNNILLATTSTDGKCR+FS
Sbjct: 125 CYYEQENNWWVSKLIRKRHDSSVTSVSWHPNNILLATTSTDGKCRVFS 172