BLASTX nr result

ID: Coptis23_contig00033207 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00033207
         (461 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002263615.2| PREDICTED: LOW QUALITY PROTEIN: probable pec...   171   6e-41
emb|CAN60346.1| hypothetical protein VITISV_001795 [Vitis vinifera]   171   6e-41
emb|CBI23207.3| unnamed protein product [Vitis vinifera]              168   5e-40
ref|XP_003610466.1| hypothetical protein MTR_4g132460 [Medicago ...   167   1e-39
ref|XP_003547262.1| PREDICTED: probable pectate lyase 16-like [G...   164   7e-39

>ref|XP_002263615.2| PREDICTED: LOW QUALITY PROTEIN: probable pectate lyase 16 [Vitis
           vinifera]
          Length = 397

 Score =  171 bits (433), Expect = 6e-41
 Identities = 83/145 (57%), Positives = 99/145 (68%), Gaps = 7/145 (4%)
 Frame = +2

Query: 41  WAPAMQAFSLEN-------KYSTVSKNHQNTQLMNKIDSCWRNDPNWALNRRALADCXXX 199
           +A  +QA+S  +        Y   S      ++MN IDSCWR   NWA NRRALADC   
Sbjct: 17  YASTLQAYSSLDYTPQTFTSYMPSSSKSSTKKVMNPIDSCWRRKANWASNRRALADCAVG 76

Query: 200 XXXXXXXXXXXDIYVVTNPADDPINPKPGTLRYGVIQTQPLWIIFARDMVIKLQNELIMN 379
                       +YVVT P+DDP+NPKPGTLRYGVIQT+PLWI+FA+DMVI L+NELIMN
Sbjct: 77  FGKGAMGGKYGAMYVVTTPSDDPVNPKPGTLRYGVIQTKPLWIVFAKDMVITLKNELIMN 136

Query: 380 SFKTIDGRGVNVEVAYGPCITVQEI 454
           SFKTIDGRG  VE+AYGPCIT+Q +
Sbjct: 137 SFKTIDGRGAKVEIAYGPCITIQGV 161


>emb|CAN60346.1| hypothetical protein VITISV_001795 [Vitis vinifera]
          Length = 397

 Score =  171 bits (433), Expect = 6e-41
 Identities = 83/145 (57%), Positives = 99/145 (68%), Gaps = 7/145 (4%)
 Frame = +2

Query: 41  WAPAMQAFSLEN-------KYSTVSKNHQNTQLMNKIDSCWRNDPNWALNRRALADCXXX 199
           +A  +QA+S  +        Y   S      ++MN IDSCWR   NWA NRRALADC   
Sbjct: 17  YASTLQAYSSLDYTPQTFTSYMPSSSKSSTKKVMNPIDSCWRRKANWASNRRALADCAVG 76

Query: 200 XXXXXXXXXXXDIYVVTNPADDPINPKPGTLRYGVIQTQPLWIIFARDMVIKLQNELIMN 379
                       +YVVT P+DDP+NPKPGTLRYGVIQT+PLWI+FA+DMVI L+NELIMN
Sbjct: 77  FGKGAMGGKYGAMYVVTTPSDDPVNPKPGTLRYGVIQTKPLWIVFAKDMVITLKNELIMN 136

Query: 380 SFKTIDGRGVNVEVAYGPCITVQEI 454
           SFKTIDGRG  VE+AYGPCIT+Q +
Sbjct: 137 SFKTIDGRGAKVEIAYGPCITIQGV 161


>emb|CBI23207.3| unnamed protein product [Vitis vinifera]
          Length = 332

 Score =  168 bits (425), Expect = 5e-40
 Identities = 77/112 (68%), Positives = 87/112 (77%)
 Frame = +2

Query: 119 MNKIDSCWRNDPNWALNRRALADCXXXXXXXXXXXXXXDIYVVTNPADDPINPKPGTLRY 298
           MN IDSCWR   NWA NRRALADC               +YVVT P+DDP+NPKPGTLRY
Sbjct: 1   MNPIDSCWRRKANWASNRRALADCAVGFGKGAMGGKYGAMYVVTTPSDDPVNPKPGTLRY 60

Query: 299 GVIQTQPLWIIFARDMVIKLQNELIMNSFKTIDGRGVNVEVAYGPCITVQEI 454
           GVIQT+PLWI+FA+DMVI L+NELIMNSFKTIDGRG  VE+AYGPCIT+Q +
Sbjct: 61  GVIQTKPLWIVFAKDMVITLKNELIMNSFKTIDGRGAKVEIAYGPCITIQGV 112


>ref|XP_003610466.1| hypothetical protein MTR_4g132460 [Medicago truncatula]
           gi|357497991|ref|XP_003619284.1| hypothetical protein
           MTR_6g045700 [Medicago truncatula]
           gi|355494299|gb|AES75502.1| hypothetical protein
           MTR_6g045700 [Medicago truncatula]
           gi|355511521|gb|AES92663.1| hypothetical protein
           MTR_4g132460 [Medicago truncatula]
          Length = 385

 Score =  167 bits (422), Expect = 1e-39
 Identities = 80/134 (59%), Positives = 96/134 (71%)
 Frame = +2

Query: 53  MQAFSLENKYSTVSKNHQNTQLMNKIDSCWRNDPNWALNRRALADCXXXXXXXXXXXXXX 232
           + A+S EN Y+T      N   +NKIDSCWR  PNWALNR+ALADC              
Sbjct: 22  VNAYSKENYYNT------NKPYLNKIDSCWRAKPNWALNRKALADCAIGFGKDSIGGKYG 75

Query: 233 DIYVVTNPADDPINPKPGTLRYGVIQTQPLWIIFARDMVIKLQNELIMNSFKTIDGRGVN 412
            IY+VT+ +DDP NPKPGTLRYG IQT+PLWIIF R+MV+ L+NELIMNS+KTIDGRGV 
Sbjct: 76  AIYIVTDSSDDPANPKPGTLRYGAIQTKPLWIIFERNMVLTLKNELIMNSYKTIDGRGVK 135

Query: 413 VEVAYGPCITVQEI 454
           VE+  GPCIT+Q +
Sbjct: 136 VEIGNGPCITIQGV 149


>ref|XP_003547262.1| PREDICTED: probable pectate lyase 16-like [Glycine max]
          Length = 373

 Score =  164 bits (415), Expect = 7e-39
 Identities = 81/134 (60%), Positives = 95/134 (70%)
 Frame = +2

Query: 53  MQAFSLENKYSTVSKNHQNTQLMNKIDSCWRNDPNWALNRRALADCXXXXXXXXXXXXXX 232
           +  F L   YST S       ++NKIDSCWR   NWA NR+ALA+C              
Sbjct: 10  LSCFILHLAYSTESA------VLNKIDSCWRAKSNWASNRQALANCGIGFGKDSIGGKYG 63

Query: 233 DIYVVTNPADDPINPKPGTLRYGVIQTQPLWIIFARDMVIKLQNELIMNSFKTIDGRGVN 412
            IY VT+P+DDPI+PKPGTLRYGVIQTQPLWIIFA+DMVI+L NELIMNS+KTIDGRG  
Sbjct: 64  SIYKVTDPSDDPISPKPGTLRYGVIQTQPLWIIFAKDMVIRLDNELIMNSYKTIDGRGAK 123

Query: 413 VEVAYGPCITVQEI 454
           VE+A GPCIT+Q +
Sbjct: 124 VEIANGPCITIQGV 137


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