BLASTX nr result
ID: Coptis23_contig00033206
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Coptis23_contig00033206
(1008 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_002322900.1| predicted protein [Populus trichocarpa] gi|2... 275 1e-71
ref|XP_002277784.1| PREDICTED: 3-deoxy-D-manno-octulosonic-acid ... 265 2e-68
ref|XP_003590389.1| 3-deoxy-D-manno-octulosonic-acid transferase... 255 1e-65
ref|XP_003535279.1| PREDICTED: 3-deoxy-D-manno-octulosonic-acid ... 254 2e-65
ref|XP_002528642.1| 3-deoxy-d-manno-octulosonic-acid transferase... 239 1e-60
>ref|XP_002322900.1| predicted protein [Populus trichocarpa] gi|222867530|gb|EEF04661.1|
predicted protein [Populus trichocarpa]
Length = 446
Score = 275 bits (703), Expect = 1e-71
Identities = 137/204 (67%), Positives = 165/204 (80%)
Frame = -2
Query: 1007 QLQLANRPVWMASSIHEGEEEVMLGVHKELMQIFPDMVTIIVPRHPXXXXXXXXXXQKEG 828
++QL +R VWMASSIH GEEEVMLGVHK L Q++PD+VTIIVPR+P QKEG
Sbjct: 239 KVQLGHRKVWMASSIHRGEEEVMLGVHKVLKQVYPDLVTIIVPRYPQHGKDIAQKLQKEG 298
Query: 827 IDVALRSRDDKISPHSNIYLVDTLGELRSLYRLTPIAVIGGSFLPGLAGHNLSEAAAAGC 648
VALRS+ +I P NIY+VDTLGELR LYRLTPIAVIGGSF PGLAGHN+SEAAAAGC
Sbjct: 299 QHVALRSQHQRIVPGRNIYVVDTLGELRHLYRLTPIAVIGGSFFPGLAGHNISEAAAAGC 358
Query: 647 AVLTGYHVGHFSHMVFAMQRTNPFSVLQVSGKRELLEALSEMFNNHRVLEARRVAAKQAF 468
AVLTGYHVGHFSHM+ MQR NP SVLQV+GK EL EA+ + F++ +VLEAR+ A+KQAF
Sbjct: 359 AVLTGYHVGHFSHMLREMQRLNPLSVLQVAGKLELEEAILKFFSDGKVLEARQTASKQAF 418
Query: 467 LALSNGIVANVWNLVHLHLISRQM 396
ALSNGI+AN WN+++ H++ + +
Sbjct: 419 HALSNGIIANAWNVLYFHVLKQAL 442
>ref|XP_002277784.1| PREDICTED: 3-deoxy-D-manno-octulosonic-acid transferase [Vitis
vinifera]
Length = 441
Score = 265 bits (676), Expect = 2e-68
Identities = 136/204 (66%), Positives = 165/204 (80%)
Frame = -2
Query: 1007 QLQLANRPVWMASSIHEGEEEVMLGVHKELMQIFPDMVTIIVPRHPXXXXXXXXXXQKEG 828
++QLA+R VWM SSIH GEEEVMLGVHK LM++ PDMVTIIVPR+P QKEG
Sbjct: 238 KVQLAHRRVWMVSSIHRGEEEVMLGVHKVLMRMHPDMVTIIVPRYPQHGREIAIELQKEG 297
Query: 827 IDVALRSRDDKISPHSNIYLVDTLGELRSLYRLTPIAVIGGSFLPGLAGHNLSEAAAAGC 648
+ VALRSRD+K+ ++IY+VDTLGELR Y LTPIAVIGGSFLPGL GHN+SEAAAAGC
Sbjct: 298 LSVALRSRDEKLVSGTSIYVVDTLGELRHFYTLTPIAVIGGSFLPGLTGHNISEAAAAGC 357
Query: 647 AVLTGYHVGHFSHMVFAMQRTNPFSVLQVSGKRELLEALSEMFNNHRVLEARRVAAKQAF 468
AVLTG+HVGHFS MV MQR+NP SVLQVS + EL EALS++F+N +LEAR +AAKQAF
Sbjct: 358 AVLTGHHVGHFSDMVLKMQRSNPLSVLQVSAE-ELEEALSQLFSNSEILEARCLAAKQAF 416
Query: 467 LALSNGIVANVWNLVHLHLISRQM 396
LS+GIVANVWN ++ +++ + +
Sbjct: 417 QTLSSGIVANVWNQLNFNVLRQAL 440
>ref|XP_003590389.1| 3-deoxy-D-manno-octulosonic-acid transferase [Medicago truncatula]
gi|355479437|gb|AES60640.1|
3-deoxy-D-manno-octulosonic-acid transferase [Medicago
truncatula]
Length = 510
Score = 255 bits (652), Expect = 1e-65
Identities = 124/200 (62%), Positives = 159/200 (79%)
Frame = -2
Query: 1001 QLANRPVWMASSIHEGEEEVMLGVHKELMQIFPDMVTIIVPRHPXXXXXXXXXXQKEGID 822
QL+++ VWMASSIH GEEE++ GVH LMQ+ P+++TIIVPRHP +++G
Sbjct: 238 QLSHKQVWMASSIHRGEEEIISGVHNVLMQLRPNIMTIIVPRHPQQGREIAKKLERQGHY 297
Query: 821 VALRSRDDKISPHSNIYLVDTLGELRSLYRLTPIAVIGGSFLPGLAGHNLSEAAAAGCAV 642
V LRS+ ++ P +NIY+VDTLGELR +Y LTPIAVIGGSFLPGL+GHN+SEAAAAGCA+
Sbjct: 298 VVLRSQHERFKPETNIYVVDTLGELRQMYTLTPIAVIGGSFLPGLSGHNISEAAAAGCAI 357
Query: 641 LTGYHVGHFSHMVFAMQRTNPFSVLQVSGKRELLEALSEMFNNHRVLEARRVAAKQAFLA 462
LTG HVGHFSHMV MQ+ NP SVLQVSGK EL ++L+E+F N +LEARR AAK+AF
Sbjct: 358 LTGRHVGHFSHMVLEMQQLNPLSVLQVSGKLELEKSLTELFTNTTLLEARRRAAKEAFCM 417
Query: 461 LSNGIVANVWNLVHLHLISR 402
LS+ IVAN+W+L++ H+ +R
Sbjct: 418 LSSDIVANIWSLLNFHIFTR 437
>ref|XP_003535279.1| PREDICTED: 3-deoxy-D-manno-octulosonic-acid transferase-like [Glycine
max]
Length = 449
Score = 254 bits (649), Expect = 2e-65
Identities = 128/202 (63%), Positives = 156/202 (77%)
Frame = -2
Query: 1007 QLQLANRPVWMASSIHEGEEEVMLGVHKELMQIFPDMVTIIVPRHPXXXXXXXXXXQKEG 828
+L+L + VWMASSIH GEEE++LGVH LMQ P+ +TIIVPRHP +KEG
Sbjct: 237 RLELTQKKVWMASSIHSGEEEIILGVHNALMQQQPNTMTIIVPRHPQEGREIAKKLEKEG 296
Query: 827 IDVALRSRDDKISPHSNIYLVDTLGELRSLYRLTPIAVIGGSFLPGLAGHNLSEAAAAGC 648
+V LRS+++K P ++IY+VDTLGELR LY LTPIAVIGGS LPGL+GHN+SEAAAAGC
Sbjct: 297 QNVVLRSQNEKFKPGTDIYVVDTLGELRLLYTLTPIAVIGGSLLPGLSGHNISEAAAAGC 356
Query: 647 AVLTGYHVGHFSHMVFAMQRTNPFSVLQVSGKRELLEALSEMFNNHRVLEARRVAAKQAF 468
AVLTG H+GHFSHMV MQR+NP SV QVSGK EL +AL E+F N +LEARR AAK+AF
Sbjct: 357 AVLTGCHIGHFSHMVLEMQRSNPLSVHQVSGKLELEKALIELFTNATLLEARRRAAKEAF 416
Query: 467 LALSNGIVANVWNLVHLHLISR 402
LS GIV N+W+L++ H+ R
Sbjct: 417 CQLSCGIVENIWSLLNFHIFCR 438
>ref|XP_002528642.1| 3-deoxy-d-manno-octulosonic-acid transferase, putative [Ricinus
communis] gi|223531931|gb|EEF33745.1|
3-deoxy-d-manno-octulosonic-acid transferase, putative
[Ricinus communis]
Length = 446
Score = 239 bits (609), Expect = 1e-60
Identities = 122/203 (60%), Positives = 153/203 (75%)
Frame = -2
Query: 1001 QLANRPVWMASSIHEGEEEVMLGVHKELMQIFPDMVTIIVPRHPXXXXXXXXXXQKEGID 822
+L +R VWMA+SIH GEE+V+L H+ L+Q +PD+VTIIVPR+ QKEG
Sbjct: 243 ELTHRQVWMAASIHRGEEQVVLEAHEALIQKYPDLVTIIVPRYGQHGQDIAQELQKEGNI 302
Query: 821 VALRSRDDKISPHSNIYLVDTLGELRSLYRLTPIAVIGGSFLPGLAGHNLSEAAAAGCAV 642
VALRS+ +I P + Y+VDT+GELR LY L+PIAVIGGSFLPGLAGHN+SEAAAAGCAV
Sbjct: 303 VALRSQRQRIVPGTQFYVVDTIGELRHLYGLSPIAVIGGSFLPGLAGHNISEAAAAGCAV 362
Query: 641 LTGYHVGHFSHMVFAMQRTNPFSVLQVSGKRELLEALSEMFNNHRVLEARRVAAKQAFLA 462
LTGYHVGHF HMV MQ NP SV+QVSG EL A+ ++F + +VLEARR+AAKQAF A
Sbjct: 363 LTGYHVGHFLHMVKEMQALNPLSVMQVSGTLELQGAIMKLFGDPKVLEARRMAAKQAFCA 422
Query: 461 LSNGIVANVWNLVHLHLISRQMR 393
LS I++NVWN ++ +++ R
Sbjct: 423 LSTDIISNVWNHLNFYILETVAR 445