BLASTX nr result

ID: Coptis23_contig00033204 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00033204
         (479 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003629245.1| Transmembrane protein 63C [Medicago truncatu...   177   6e-43
ref|XP_004166972.1| PREDICTED: transmembrane protein 63B-like [C...   176   2e-42
ref|XP_004135016.1| PREDICTED: transmembrane protein 63B-like [C...   176   2e-42
ref|XP_002534042.1| conserved hypothetical protein [Ricinus comm...   176   2e-42
emb|CAN78665.1| hypothetical protein VITISV_019819 [Vitis vinifera]   175   3e-42

>ref|XP_003629245.1| Transmembrane protein 63C [Medicago truncatula]
           gi|355523267|gb|AET03721.1| Transmembrane protein 63C
           [Medicago truncatula]
          Length = 887

 Score =  177 bits (450), Expect = 6e-43
 Identities = 90/134 (67%), Positives = 102/134 (76%), Gaps = 5/134 (3%)
 Frame = +3

Query: 93  PPPSNEDDPT----WYGNIQYLLNISAIGSLTCXXXXXXXXXXSDHR-MPGPTALLSKLL 257
           PPPS+ DD      WYGNI YLLNISAIG+L C          SDHR MPGP+A+ SKLL
Sbjct: 7   PPPSSGDDGDPIGLWYGNIDYLLNISAIGALFCLLIFLLVKLRSDHRRMPGPSAIASKLL 66

Query: 258 AVWHATGREIASHCGADAAQFLLIEGGSCVILLSIAFFAICLLLPLNLYAGNATMDDQFS 437
           AVWHATGREIA HCGADAAQFLLIEGGSC +LL++A  A+ +LLP+NL+AG   +DDQFS
Sbjct: 67  AVWHATGREIARHCGADAAQFLLIEGGSCAVLLAVAALALVVLLPVNLHAGTGVLDDQFS 126

Query: 438 MTTINHIQKGSGLL 479
            TTINHI KGS LL
Sbjct: 127 KTTINHIPKGSPLL 140


>ref|XP_004166972.1| PREDICTED: transmembrane protein 63B-like [Cucumis sativus]
          Length = 809

 Score =  176 bits (445), Expect = 2e-42
 Identities = 88/138 (63%), Positives = 106/138 (76%), Gaps = 7/138 (5%)
 Frame = +3

Query: 87  SSPPPSNEDD------PTWYGNIQYLLNISAIGSLTCXXXXXXXXXXSDHR-MPGPTALL 245
           SSPPPS++D        +WYGNI+YLLNIS IG+ +C          SDHR +PGP+ L+
Sbjct: 12  SSPPPSSDDGGSSSDVTSWYGNIEYLLNISMIGAFSCLFIFLFVKLRSDHRRIPGPSGLV 71

Query: 246 SKLLAVWHATGREIASHCGADAAQFLLIEGGSCVILLSIAFFAICLLLPLNLYAGNATMD 425
           +KLLAVWHAT R+IA HCGADAAQFLLIEGGSC +LLSIA  ++ +LLPLNLYAG A ++
Sbjct: 72  TKLLAVWHATCRDIARHCGADAAQFLLIEGGSCAVLLSIAVLSVSVLLPLNLYAGKAVLN 131

Query: 426 DQFSMTTINHIQKGSGLL 479
           DQFS TTINHI+KGS LL
Sbjct: 132 DQFSKTTINHIEKGSVLL 149


>ref|XP_004135016.1| PREDICTED: transmembrane protein 63B-like [Cucumis sativus]
          Length = 809

 Score =  176 bits (445), Expect = 2e-42
 Identities = 88/138 (63%), Positives = 106/138 (76%), Gaps = 7/138 (5%)
 Frame = +3

Query: 87  SSPPPSNEDD------PTWYGNIQYLLNISAIGSLTCXXXXXXXXXXSDHR-MPGPTALL 245
           SSPPPS++D        +WYGNI+YLLNIS IG+ +C          SDHR +PGP+ L+
Sbjct: 12  SSPPPSSDDGGSSSDVTSWYGNIEYLLNISMIGAFSCLFIFLFVKLRSDHRRIPGPSGLV 71

Query: 246 SKLLAVWHATGREIASHCGADAAQFLLIEGGSCVILLSIAFFAICLLLPLNLYAGNATMD 425
           +KLLAVWHAT R+IA HCGADAAQFLLIEGGSC +LLSIA  ++ +LLPLNLYAG A ++
Sbjct: 72  TKLLAVWHATCRDIARHCGADAAQFLLIEGGSCAVLLSIAVLSVSVLLPLNLYAGKAVLN 131

Query: 426 DQFSMTTINHIQKGSGLL 479
           DQFS TTINHI+KGS LL
Sbjct: 132 DQFSKTTINHIEKGSVLL 149


>ref|XP_002534042.1| conserved hypothetical protein [Ricinus communis]
           gi|223525949|gb|EEF28346.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 807

 Score =  176 bits (445), Expect = 2e-42
 Identities = 90/133 (67%), Positives = 101/133 (75%), Gaps = 2/133 (1%)
 Frame = +3

Query: 87  SSPPPSNEDDP-TWYGNIQYLLNISAIGSLTCXXXXXXXXXXSDHR-MPGPTALLSKLLA 260
           SS   S+ D P +WYGNIQYLLNIS IG L C          SDHR +PGP+AL+SKLLA
Sbjct: 13  SSSGDSDSDIPNSWYGNIQYLLNISTIGLLFCIFIFIFVKLRSDHRRIPGPSALISKLLA 72

Query: 261 VWHATGREIASHCGADAAQFLLIEGGSCVILLSIAFFAICLLLPLNLYAGNATMDDQFSM 440
           VWHATGREIA HCGADAAQFL+IEGGS  +LL IA  +IC +LPLNLYAG A +DDQFS 
Sbjct: 73  VWHATGREIARHCGADAAQFLIIEGGSFAVLLGIAVLSICFVLPLNLYAGTAVLDDQFSK 132

Query: 441 TTINHIQKGSGLL 479
           TTINHI+KGS  L
Sbjct: 133 TTINHIEKGSAFL 145


>emb|CAN78665.1| hypothetical protein VITISV_019819 [Vitis vinifera]
          Length = 242

 Score =  175 bits (444), Expect = 3e-42
 Identities = 90/141 (63%), Positives = 102/141 (72%), Gaps = 5/141 (3%)
 Frame = +3

Query: 72  KTMNYSSPPPSN----EDDPTWYGNIQYLLNISAIGSLTCXXXXXXXXXXSDHR-MPGPT 236
           + MN S PPP +    + D  WYGNIQYLLNISAIG   C          SDHR +PGP 
Sbjct: 15  QAMNSSLPPPPSPSFPDGDEVWYGNIQYLLNISAIGLFCCVFIFFFVKLRSDHRRIPGPA 74

Query: 237 ALLSKLLAVWHATGREIASHCGADAAQFLLIEGGSCVILLSIAFFAICLLLPLNLYAGNA 416
            + +KLLAVWHAT REIA HCGADAAQFLLIEGGSC ++LSIA F+  L+LPLNLYAG A
Sbjct: 75  GVAAKLLAVWHATVREIARHCGADAAQFLLIEGGSCAVILSIAVFSTFLMLPLNLYAGAA 134

Query: 417 TMDDQFSMTTINHIQKGSGLL 479
             +DQFS TTINHI+KGS LL
Sbjct: 135 VREDQFSKTTINHIEKGSALL 155


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