BLASTX nr result

ID: Coptis23_contig00033199 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00033199
         (239 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004143125.1| PREDICTED: uncharacterized protein LOC101204...    86   4e-15
gb|ACR38196.1| unknown [Zea mays] gi|414876355|tpg|DAA53486.1| T...    84   1e-14
ref|NP_001144708.1| uncharacterized protein LOC100277744 [Zea ma...    84   1e-14
emb|CBI16107.3| unnamed protein product [Vitis vinifera]               83   3e-14
ref|XP_002533747.1| conserved hypothetical protein [Ricinus comm...    82   6e-14

>ref|XP_004143125.1| PREDICTED: uncharacterized protein LOC101204960 [Cucumis sativus]
           gi|449508124|ref|XP_004163226.1| PREDICTED:
           uncharacterized LOC101204960 [Cucumis sativus]
          Length = 178

 Score = 85.5 bits (210), Expect = 4e-15
 Identities = 41/69 (59%), Positives = 54/69 (78%), Gaps = 2/69 (2%)
 Frame = -2

Query: 223 SNTQIRKCIVIMEGNPHPGAVKGRMSFQSFNPSIDKLNEAAENPDQPKVSSANAGD--AN 50
           S T+IRKC+V++EG+PHPGA+KGRMSFQSFNPSIDKLNE A +  Q ++   ++G+   N
Sbjct: 41  SGTKIRKCVVLVEGDPHPGALKGRMSFQSFNPSIDKLNEEAASLGQHEIPGTSSGNHSGN 100

Query: 49  NFERENGSS 23
              R+NGSS
Sbjct: 101 LSSRDNGSS 109


>gb|ACR38196.1| unknown [Zea mays] gi|414876355|tpg|DAA53486.1| TPA: hypothetical
           protein ZEAMMB73_579373 [Zea mays]
          Length = 191

 Score = 84.0 bits (206), Expect = 1e-14
 Identities = 40/68 (58%), Positives = 49/68 (72%)
 Frame = -2

Query: 229 SSSNTQIRKCIVIMEGNPHPGAVKGRMSFQSFNPSIDKLNEAAENPDQPKVSSANAGDAN 50
           +SS   +RKCIVIMEGNPHPGA+KGRMSFQ+FNPSIDKLNE A    Q + +S +  D +
Sbjct: 48  ASSAQVVRKCIVIMEGNPHPGAIKGRMSFQNFNPSIDKLNEEARGDQQTESASPSNCDQD 107

Query: 49  NFERENGS 26
           N     G+
Sbjct: 108 NANSSRGN 115


>ref|NP_001144708.1| uncharacterized protein LOC100277744 [Zea mays]
           gi|195646098|gb|ACG42517.1| hypothetical protein [Zea
           mays]
          Length = 191

 Score = 84.0 bits (206), Expect = 1e-14
 Identities = 40/68 (58%), Positives = 49/68 (72%)
 Frame = -2

Query: 229 SSSNTQIRKCIVIMEGNPHPGAVKGRMSFQSFNPSIDKLNEAAENPDQPKVSSANAGDAN 50
           +SS   +RKCIVIMEGNPHPGA+KGRMSFQ+FNPSIDKLNE A    Q + +S +  D +
Sbjct: 48  ASSAQVVRKCIVIMEGNPHPGAIKGRMSFQNFNPSIDKLNEEARGDQQTESASPSNCDQD 107

Query: 49  NFERENGS 26
           N     G+
Sbjct: 108 NANSSRGN 115


>emb|CBI16107.3| unnamed protein product [Vitis vinifera]
          Length = 186

 Score = 82.8 bits (203), Expect = 3e-14
 Identities = 44/74 (59%), Positives = 55/74 (74%), Gaps = 1/74 (1%)
 Frame = -2

Query: 226 SSNTQIRKCIVIMEGNPHPGAVKGRMSFQSFNPSIDKLNEAAENPDQPKVSSANAGDANN 47
           S NT  RKC+VI+EG+PHPGA KGRMSFQ+FNP+IDKLN+AA NP QP VS+  + + + 
Sbjct: 40  SPNTVKRKCVVIVEGDPHPGATKGRMSFQNFNPAIDKLNDAA-NPCQPAVSATCSNNQSE 98

Query: 46  FE-RENGSSCIGPD 8
              REN SS  G +
Sbjct: 99  KNCRENRSSLDGEE 112


>ref|XP_002533747.1| conserved hypothetical protein [Ricinus communis]
           gi|223526335|gb|EEF28634.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 189

 Score = 81.6 bits (200), Expect = 6e-14
 Identities = 45/75 (60%), Positives = 52/75 (69%), Gaps = 5/75 (6%)
 Frame = -2

Query: 211 IRKCIVIMEGNPHPGAVKGRMSFQSFNPSIDKLNEAAENPDQPKVS----SANAGDANNF 44
           IRKC+VIMEG+PHPGA  GRMSFQSFNPS+DKLNE   N  QPKVS    S ++G +   
Sbjct: 44  IRKCVVIMEGDPHPGASIGRMSFQSFNPSVDKLNEDTTNLGQPKVSDVYVSTSSGQSGGT 103

Query: 43  E-RENGSSCIGPDGS 2
             R NGSS  G + S
Sbjct: 104 SFRGNGSSLNGAECS 118


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