BLASTX nr result

ID: Coptis23_contig00033198 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00033198
         (244 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002314712.1| predicted protein [Populus trichocarpa] gi|2...    86   3e-15
ref|XP_002277898.1| PREDICTED: uncharacterized protein LOC100254...    85   7e-15
emb|CAN75979.1| hypothetical protein VITISV_012183 [Vitis vinifera]    85   7e-15
ref|XP_002312520.1| predicted protein [Populus trichocarpa] gi|2...    79   3e-13
ref|XP_003556033.1| PREDICTED: uncharacterized protein LOC100527...    77   2e-12

>ref|XP_002314712.1| predicted protein [Populus trichocarpa] gi|222863752|gb|EEF00883.1|
           predicted protein [Populus trichocarpa]
          Length = 235

 Score = 85.9 bits (211), Expect = 3e-15
 Identities = 41/55 (74%), Positives = 46/55 (83%)
 Frame = +3

Query: 27  GKESLWNREKHVKRIKQGLERTRSASIRIRPVINVPSSTQGKTSVMPPLFHLRKG 191
           GK   WNREKHVKRIK+GLERTRSASIRIRP+INVP  T  K+S +PPLF L+KG
Sbjct: 177 GKHGSWNREKHVKRIKKGLERTRSASIRIRPMINVPICTPVKSSALPPLFPLKKG 231


>ref|XP_002277898.1| PREDICTED: uncharacterized protein LOC100254485 [Vitis vinifera]
          Length = 235

 Score = 84.7 bits (208), Expect = 7e-15
 Identities = 44/63 (69%), Positives = 50/63 (79%)
 Frame = +3

Query: 3   GSIDAGKTGKESLWNREKHVKRIKQGLERTRSASIRIRPVINVPSSTQGKTSVMPPLFHL 182
           G++D GK G      REK VKRIK+GLERTRSASIRIRPVINVP  TQGK S++PPLF L
Sbjct: 172 GTMDQGKEGSGK---REKQVKRIKKGLERTRSASIRIRPVINVPICTQGKASLLPPLFPL 228

Query: 183 RKG 191
           +KG
Sbjct: 229 KKG 231


>emb|CAN75979.1| hypothetical protein VITISV_012183 [Vitis vinifera]
          Length = 301

 Score = 84.7 bits (208), Expect = 7e-15
 Identities = 44/63 (69%), Positives = 50/63 (79%)
 Frame = +3

Query: 3   GSIDAGKTGKESLWNREKHVKRIKQGLERTRSASIRIRPVINVPSSTQGKTSVMPPLFHL 182
           G++D GK G      REK VKRIK+GLERTRSASIRIRPVINVP  TQGK S++PPLF L
Sbjct: 172 GTMDQGKEGSGK---REKQVKRIKKGLERTRSASIRIRPVINVPICTQGKASLLPPLFPL 228

Query: 183 RKG 191
           +KG
Sbjct: 229 KKG 231


>ref|XP_002312520.1| predicted protein [Populus trichocarpa] gi|222852340|gb|EEE89887.1|
           predicted protein [Populus trichocarpa]
          Length = 233

 Score = 79.3 bits (194), Expect = 3e-13
 Identities = 39/55 (70%), Positives = 45/55 (81%)
 Frame = +3

Query: 27  GKESLWNREKHVKRIKQGLERTRSASIRIRPVINVPSSTQGKTSVMPPLFHLRKG 191
           GK    N EKHVKRIK+GLERTRSAS+RIRP+INVP  TQ K+S +PPLF L+KG
Sbjct: 175 GKRGSGNGEKHVKRIKKGLERTRSASMRIRPMINVPICTQMKSSALPPLFPLKKG 229


>ref|XP_003556033.1| PREDICTED: uncharacterized protein LOC100527845 isoform 1 [Glycine
           max] gi|356575819|ref|XP_003556034.1| PREDICTED:
           uncharacterized protein LOC100527845 isoform 2 [Glycine
           max]
          Length = 252

 Score = 76.6 bits (187), Expect = 2e-12
 Identities = 38/58 (65%), Positives = 47/58 (81%)
 Frame = +3

Query: 18  GKTGKESLWNREKHVKRIKQGLERTRSASIRIRPVINVPSSTQGKTSVMPPLFHLRKG 191
           GK G  S  N+E+HVKR+K+GLER RSA+IRIRP+INVP  TQ K+S +PPLF L+KG
Sbjct: 192 GKEGSRSS-NKEQHVKRVKKGLERARSATIRIRPMINVPICTQVKSSALPPLFPLKKG 248


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