BLASTX nr result
ID: Coptis23_contig00033195
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Coptis23_contig00033195
(1227 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|NP_001173127.1| Os02g0701833 [Oryza sativa Japonica Group] g... 44 3e-13
ref|XP_002440837.1| hypothetical protein SORBIDRAFT_09g008040 [S... 47 3e-13
ref|XP_002467194.1| hypothetical protein SORBIDRAFT_01g021220 [S... 47 1e-12
ref|XP_002446463.1| hypothetical protein SORBIDRAFT_06g016400 [S... 45 1e-12
ref|NP_001046804.2| Os02g0463700 [Oryza sativa Japonica Group] g... 46 2e-12
>ref|NP_001173127.1| Os02g0701833 [Oryza sativa Japonica Group]
gi|255671190|dbj|BAH91856.1| Os02g0701833 [Oryza sativa
Japonica Group]
Length = 1582
Score = 43.9 bits (102), Expect(4) = 3e-13
Identities = 20/53 (37%), Positives = 30/53 (56%)
Frame = +3
Query: 228 LHAYIRVSKFQRYSLPHGHIFILFNDHDKLRKPDYYNKI*HVEICDPMPSPAQ 386
+ AY V++FQ+ LPH HI ++ KL PD Y+K+ IC +P A+
Sbjct: 749 VQAYAHVTEFQKRGLPHEHILLIMKSSSKLTTPDEYDKV----ICTEIPDKAK 797
Score = 43.9 bits (102), Expect(4) = 3e-13
Identities = 28/78 (35%), Positives = 41/78 (52%), Gaps = 1/78 (1%)
Frame = +3
Query: 627 LFIKNYCDINLEVCTTIKSVKYFYKSVHKASDRVSLKVN-SHEPHAPAKISNLLLMSSLC 803
L ++ C IN+E C +IKSVKY YK V+K D S V+ S E + + N ++
Sbjct: 867 LLMRYNCHINVEACASIKSVKYLYKYVYKGHDCASFSVDPSGEINEIQQYRNARYVTP-- 924
Query: 804 LQESLSRMFNFSLIRL*P 857
E++ RM F L + P
Sbjct: 925 -PEAIHRMLGFPLFGIYP 941
Score = 30.4 bits (67), Expect(4) = 3e-13
Identities = 22/62 (35%), Positives = 26/62 (41%)
Frame = +1
Query: 436 LNAHCVCMTKWAV*KKVSQRICTSECTHRTNSYGIY*RCVDS*VVYLHNKVSDHNRWVVP 615
LN +C CM A +SY +Y R D V + V D NRWVVP
Sbjct: 817 LNRNCACMFNQAT-------------QQGKDSYPLYRRRDDGWRVKIRGAVLD-NRWVVP 862
Query: 616 YN 621
YN
Sbjct: 863 YN 864
Score = 22.7 bits (47), Expect(4) = 3e-13
Identities = 7/17 (41%), Positives = 13/17 (76%)
Frame = +2
Query: 383 PGLYNILMKNISHGRCG 433
P L+ +++K++ HG CG
Sbjct: 799 PELHRLVIKHMLHGPCG 815
>ref|XP_002440837.1| hypothetical protein SORBIDRAFT_09g008040 [Sorghum bicolor]
gi|241946122|gb|EES19267.1| hypothetical protein
SORBIDRAFT_09g008040 [Sorghum bicolor]
Length = 1679
Score = 46.6 bits (109), Expect(3) = 3e-13
Identities = 27/82 (32%), Positives = 45/82 (54%), Gaps = 4/82 (4%)
Frame = +3
Query: 624 LLFIKNYCDINLEVCTTIKSVKYFYKSVHKASDRVSLKVNSHEPHAPAKISNLLLM---- 791
LLF N C IN+E C++IK+VKY +K V+K D+ S+ VN+ + + N +
Sbjct: 880 LLFRYN-CHINVEACSSIKAVKYLFKYVYKGHDQASISVNADQNDTDDGVINEIKQYRNA 938
Query: 792 SSLCLQESLSRMFNFSLIRL*P 857
+ E++ R+F F + + P
Sbjct: 939 RYISAPEAVHRIFGFPMFGVYP 960
Score = 43.1 bits (100), Expect(3) = 3e-13
Identities = 21/59 (35%), Positives = 34/59 (57%)
Frame = +3
Query: 189 KKIYSKRVF*DELLHAYIRVSKFQRYSLPHGHIFILFNDHDKLRKPDYYNKI*HVEICD 365
K + KR + E+ AY+ V++FQ+ LPH H+ ++ KL PD Y+++ EI D
Sbjct: 738 KDLLIKRKYFGEVA-AYVHVTEFQKRGLPHEHLLLIMKSGSKLTTPDAYDRVISAEIPD 795
Score = 32.0 bits (71), Expect(3) = 3e-13
Identities = 24/63 (38%), Positives = 29/63 (46%), Gaps = 1/63 (1%)
Frame = +1
Query: 436 LNAHCVCMTKWAV*KKVSQRICTSECTHRTN-SYGIY*RCVDS*VVYLHNKVSDHNRWVV 612
LN C CM + ++ C E T + N SY Y R D V + D NRWVV
Sbjct: 818 LNKKCACMVNEECRFQYPRQFC--EATQQGNDSYPTYRRRDDGRRVKIRKAELD-NRWVV 874
Query: 613 PYN 621
PYN
Sbjct: 875 PYN 877
>ref|XP_002467194.1| hypothetical protein SORBIDRAFT_01g021220 [Sorghum bicolor]
gi|241921048|gb|EER94192.1| hypothetical protein
SORBIDRAFT_01g021220 [Sorghum bicolor]
Length = 1439
Score = 46.6 bits (109), Expect(3) = 1e-12
Identities = 27/82 (32%), Positives = 45/82 (54%), Gaps = 4/82 (4%)
Frame = +3
Query: 624 LLFIKNYCDINLEVCTTIKSVKYFYKSVHKASDRVSLKVNSHEPHAPAKISNLLLM---- 791
LLF N C IN+E C++IK+VKY +K V+K D+ S+ VN+ + + N +
Sbjct: 881 LLFRYN-CHINVEACSSIKAVKYLFKYVYKGHDQASISVNADQNDTDDGVINEIKQYRNA 939
Query: 792 SSLCLQESLSRMFNFSLIRL*P 857
+ E++ R+F F + + P
Sbjct: 940 RYISAPEAVHRIFGFPMFGVYP 961
Score = 43.1 bits (100), Expect(3) = 1e-12
Identities = 21/59 (35%), Positives = 34/59 (57%)
Frame = +3
Query: 189 KKIYSKRVF*DELLHAYIRVSKFQRYSLPHGHIFILFNDHDKLRKPDYYNKI*HVEICD 365
K + KR + E+ AY+ V++FQ+ LPH H+ ++ KL PD Y+++ EI D
Sbjct: 739 KDLLIKRKYFGEVA-AYVHVTEFQKRGLPHEHLLLIMKSGSKLTTPDAYDRVISAEIPD 796
Score = 29.6 bits (65), Expect(3) = 1e-12
Identities = 23/63 (36%), Positives = 28/63 (44%), Gaps = 1/63 (1%)
Frame = +1
Query: 436 LNAHCVCMTKWAV*KKVSQRICTSECTHRTN-SYGIY*RCVDS*VVYLHNKVSDHNRWVV 612
LN C CM + ++ C E T + N SY Y R D V + D N WVV
Sbjct: 819 LNKKCACMVNEECRFQYPRQFC--EATQQGNDSYPTYRRRDDGRRVKIRKAELD-NMWVV 875
Query: 613 PYN 621
PYN
Sbjct: 876 PYN 878
>ref|XP_002446463.1| hypothetical protein SORBIDRAFT_06g016400 [Sorghum bicolor]
gi|241937646|gb|EES10791.1| hypothetical protein
SORBIDRAFT_06g016400 [Sorghum bicolor]
Length = 998
Score = 44.7 bits (104), Expect(3) = 1e-12
Identities = 23/60 (38%), Positives = 34/60 (56%)
Frame = +3
Query: 195 IYSKRVF*DELLHAYIRVSKFQRYSLPHGHIFILFNDHDKLRKPDYYNKI*HVEICDPMP 374
+ KR F D + AY+ V++FQ+ LPH HI ++ + KL PD Y+K IC +P
Sbjct: 65 LVKKRYFGD--VAAYVHVTEFQKRGLPHEHILLIMHSRSKLTNPDAYDK----HICAEIP 118
Score = 42.4 bits (98), Expect(3) = 1e-12
Identities = 24/78 (30%), Positives = 41/78 (52%)
Frame = +3
Query: 627 LFIKNYCDINLEVCTTIKSVKYFYKSVHKASDRVSLKVNSHEPHAPAKISNLLLMSSLCL 806
LF++ C +N+E C++IK+ KY +K V+K DR V + P +I +
Sbjct: 204 LFMRYNCHMNVEACSSIKACKYLFKYVYKGHDRAEFLVET--PGVINEIRRYRDARYISP 261
Query: 807 QESLSRMFNFSLIRL*PT 860
E++ R+F F L + P+
Sbjct: 262 PEAVYRIFGFHLFGVYPS 279
Score = 32.3 bits (72), Expect(3) = 1e-12
Identities = 25/64 (39%), Positives = 32/64 (50%), Gaps = 1/64 (1%)
Frame = +1
Query: 433 ALNAHCVCMTKWAV*KKVSQRICTSECTHR-TNSYGIY*RCVDS*VVYLHNKVSDHNRWV 609
ALN C CM A + ++ SE T + +SY +Y R D V + D NRWV
Sbjct: 141 ALNRKCPCMVDGACRFQYPRQF--SEATQQGKDSYPLYRRRDDGRRVKIRGAELD-NRWV 197
Query: 610 VPYN 621
VPYN
Sbjct: 198 VPYN 201
>ref|NP_001046804.2| Os02g0463700 [Oryza sativa Japonica Group]
gi|255670879|dbj|BAF08718.2| Os02g0463700 [Oryza sativa
Japonica Group]
Length = 1221
Score = 46.2 bits (108), Expect(4) = 2e-12
Identities = 25/72 (34%), Positives = 41/72 (56%), Gaps = 1/72 (1%)
Frame = +3
Query: 645 CDINLEVCTTIKSVKYFYKSVHKASDRVSLKVNSHEPHAPA-KISNLLLMSSLCLQESLS 821
C IN+EVC++IK+VKY +K ++K DR S+ VN + +I + E+L
Sbjct: 722 CHINVEVCSSIKAVKYLFKYIYKGHDRASVSVNGVDNEGDIDEIRQYRDARWVTPPEALW 781
Query: 822 RMFNFSLIRL*P 857
R++ F L ++ P
Sbjct: 782 RIYGFDLSKIHP 793
Score = 33.9 bits (76), Expect(4) = 2e-12
Identities = 18/64 (28%), Positives = 31/64 (48%)
Frame = +3
Query: 189 KKIYSKRVF*DELLHAYIRVSKFQRYSLPHGHIFILFNDHDKLRKPDYYNKI*HVEICDP 368
K+++ K +F + AY V +FQ+ LPH H ++ K + Y++I E+ D
Sbjct: 574 KQLFEKSIF--GTVKAYTYVVEFQKKGLPHAHFLLIMTGKYKYTCAEQYDRIISAELPDQ 631
Query: 369 MPSP 380
P
Sbjct: 632 RRYP 635
Score = 33.5 bits (75), Expect(4) = 2e-12
Identities = 22/62 (35%), Positives = 28/62 (45%)
Frame = +1
Query: 436 LNAHCVCMTKWAV*KKVSQRICTSECTHRTNSYGIY*RCVDS*VVYLHNKVSDHNRWVVP 615
LN +C CM + K R + +SY +Y R D V + D NRWVVP
Sbjct: 653 LNHNCPCMKNRSSCKNYYPRPFNATTIQGKDSYPVYRRRDDGRTVIVRKCPLD-NRWVVP 711
Query: 616 YN 621
YN
Sbjct: 712 YN 713
Score = 24.6 bits (52), Expect(4) = 2e-12
Identities = 8/17 (47%), Positives = 13/17 (76%)
Frame = +2
Query: 383 PGLYNILMKNISHGRCG 433
P LY +++K++ HG CG
Sbjct: 635 PELYTMVVKHMMHGPCG 651