BLASTX nr result

ID: Coptis23_contig00033186 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00033186
         (303 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004135545.1| PREDICTED: probable LRR receptor-like serine...    64   1e-21
ref|XP_004158073.1| PREDICTED: LOW QUALITY PROTEIN: probable LRR...    64   5e-21
ref|XP_003531280.1| PREDICTED: probable LRR receptor-like serine...    63   2e-20
ref|XP_003531281.1| PREDICTED: probable LRR receptor-like serine...    63   2e-20
ref|XP_002300567.1| predicted protein [Populus trichocarpa] gi|2...    66   3e-20

>ref|XP_004135545.1| PREDICTED: probable LRR receptor-like serine/threonine-protein
           kinase At4g20940-like [Cucumis sativus]
          Length = 1061

 Score = 64.3 bits (155), Expect(2) = 1e-21
 Identities = 32/50 (64%), Positives = 35/50 (70%)
 Frame = +1

Query: 1   LSCNVFSKNIPSGFEGVSSLQVLDLHQNMLDGHFDVEFLLLSSVVHVDFS 150
           LS N F+  IP GFE +S L+VLDLH NMLDG  DVEF  LS   HVDFS
Sbjct: 196 LSFNGFTDRIPKGFELLSELEVLDLHGNMLDGTLDVEFFTLSGATHVDFS 245



 Score = 63.5 bits (153), Expect(2) = 1e-21
 Identities = 31/50 (62%), Positives = 39/50 (78%)
 Frame = +3

Query: 153 NMLSCSGSQKDKFLPSISETIKYLNLSNNQFTGSLVNGGELPIFGSLKVL 302
           NML+ S     KFLP +S++IK+LNLS+NQ TGSLVNGGEL +F +LK L
Sbjct: 247 NMLTSSDMGHGKFLPRLSDSIKHLNLSHNQLTGSLVNGGELSLFENLKTL 296


>ref|XP_004158073.1| PREDICTED: LOW QUALITY PROTEIN: probable LRR receptor-like
           serine/threonine-protein kinase At4g20940-like [Cucumis
           sativus]
          Length = 1061

 Score = 64.3 bits (155), Expect(2) = 5e-21
 Identities = 32/50 (64%), Positives = 35/50 (70%)
 Frame = +1

Query: 1   LSCNVFSKNIPSGFEGVSSLQVLDLHQNMLDGHFDVEFLLLSSVVHVDFS 150
           LS N F+  IP GFE +S L+VLDLH NMLDG  DVEF  LS   HVDFS
Sbjct: 196 LSFNGFTDRIPKGFELLSELEVLDLHGNMLDGTLDVEFFTLSGATHVDFS 245



 Score = 61.6 bits (148), Expect(2) = 5e-21
 Identities = 30/50 (60%), Positives = 38/50 (76%)
 Frame = +3

Query: 153 NMLSCSGSQKDKFLPSISETIKYLNLSNNQFTGSLVNGGELPIFGSLKVL 302
           NML+ S     KFLP +S++ K+LNLS+NQ TGSLVNGGEL +F +LK L
Sbjct: 247 NMLTSSDMGHGKFLPRLSDSTKHLNLSHNQLTGSLVNGGELSLFENLKTL 296


>ref|XP_003531280.1| PREDICTED: probable LRR receptor-like serine/threonine-protein
           kinase At4g20940-like isoform 1 [Glycine max]
          Length = 1065

 Score = 63.2 bits (152), Expect(2) = 2e-20
 Identities = 32/50 (64%), Positives = 39/50 (78%)
 Frame = +3

Query: 153 NMLSCSGSQKDKFLPSISETIKYLNLSNNQFTGSLVNGGELPIFGSLKVL 302
           NML  S SQ+ K LP +SE+IKYLNLS+N+ TGSLV+GG+ P F  LKVL
Sbjct: 250 NMLVSSNSQQQKSLPQLSESIKYLNLSHNRLTGSLVSGGKQPNFEYLKVL 299



 Score = 60.5 bits (145), Expect(2) = 2e-20
 Identities = 29/50 (58%), Positives = 36/50 (72%)
 Frame = +1

Query: 1   LSCNVFSKNIPSGFEGVSSLQVLDLHQNMLDGHFDVEFLLLSSVVHVDFS 150
           LS N F+  IP GFE + SL+ +DLH NML+GH D EF+L SS  +VDFS
Sbjct: 199 LSHNCFTGKIPKGFELIFSLEKIDLHGNMLEGHLDDEFILFSSASYVDFS 248


>ref|XP_003531281.1| PREDICTED: probable LRR receptor-like serine/threonine-protein
           kinase At4g20940-like isoform 2 [Glycine max]
          Length = 987

 Score = 63.2 bits (152), Expect(2) = 2e-20
 Identities = 32/50 (64%), Positives = 39/50 (78%)
 Frame = +3

Query: 153 NMLSCSGSQKDKFLPSISETIKYLNLSNNQFTGSLVNGGELPIFGSLKVL 302
           NML  S SQ+ K LP +SE+IKYLNLS+N+ TGSLV+GG+ P F  LKVL
Sbjct: 232 NMLVSSNSQQQKSLPQLSESIKYLNLSHNRLTGSLVSGGKQPNFEYLKVL 281



 Score = 60.5 bits (145), Expect(2) = 2e-20
 Identities = 29/50 (58%), Positives = 36/50 (72%)
 Frame = +1

Query: 1   LSCNVFSKNIPSGFEGVSSLQVLDLHQNMLDGHFDVEFLLLSSVVHVDFS 150
           LS N F+  IP GFE + SL+ +DLH NML+GH D EF+L SS  +VDFS
Sbjct: 181 LSHNCFTGKIPKGFELIFSLEKIDLHGNMLEGHLDDEFILFSSASYVDFS 230


>ref|XP_002300567.1| predicted protein [Populus trichocarpa] gi|222847825|gb|EEE85372.1|
           predicted protein [Populus trichocarpa]
          Length = 998

 Score = 65.9 bits (159), Expect(2) = 3e-20
 Identities = 32/51 (62%), Positives = 37/51 (72%)
 Frame = +1

Query: 1   LSCNVFSKNIPSGFEGVSSLQVLDLHQNMLDGHFDVEFLLLSSVVHVDFSG 153
           LS N F+K IP GFE +SSLQVLDLH+NM DGH D  F L ++  HVD SG
Sbjct: 138 LSSNGFTKMIPKGFELISSLQVLDLHENMFDGHLDGMFFLETNASHVDLSG 188



 Score = 57.4 bits (137), Expect(2) = 3e-20
 Identities = 29/50 (58%), Positives = 39/50 (78%)
 Frame = +3

Query: 153 NMLSCSGSQKDKFLPSISETIKYLNLSNNQFTGSLVNGGELPIFGSLKVL 302
           NML  S SQ+   LP +SE+IK LNLS+NQ +GSL+NGG++ +F S+KVL
Sbjct: 189 NMLVSSSSQR--LLPGMSESIKLLNLSHNQLSGSLLNGGDMQLFASVKVL 236


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