BLASTX nr result

ID: Coptis23_contig00033173 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00033173
         (387 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI23327.3| unnamed protein product [Vitis vinifera]              158   4e-37
ref|XP_003593434.1| B3 domain-containing transcription repressor...   146   2e-33
ref|XP_004155579.1| PREDICTED: LOW QUALITY PROTEIN: B3 domain-co...   145   4e-33
ref|XP_004134723.1| PREDICTED: B3 domain-containing protein Os07...   145   4e-33
ref|XP_002305001.1| predicted protein [Populus trichocarpa] gi|2...   144   6e-33

>emb|CBI23327.3| unnamed protein product [Vitis vinifera]
          Length = 601

 Score =  158 bits (400), Expect = 4e-37
 Identities = 74/128 (57%), Positives = 94/128 (73%)
 Frame = -1

Query: 387 SKGRQYILEGLAPCFQPMQQQAGDTVTFSRIDPEGKLVIGFRKAASVPPPDQDQQSLKCG 208
           +  R Y+LEG+ PC Q MQ QAGDTVTFSR++PEGKLV+GFRKA++ P  DQ  +++K G
Sbjct: 387 NNSRMYVLEGVTPCIQSMQLQAGDTVTFSRLEPEGKLVMGFRKASTAPSSDQGNETIKTG 446

Query: 207 SGVSKDSEVKAADPVGTWSKIDRSGYIAKDVAGAKLFISNRRKSSSLAYKCKRRRTDNED 28
           +G S   +   ADP   WSK+D+SGYIAK+  GAK  I  +RK+S+L  K KR R +NED
Sbjct: 447 NGGSTHGDADLADPASAWSKVDKSGYIAKEALGAKSSIPRKRKNSTLGSKSKRLRIENED 506

Query: 27  LIELKLTW 4
           LIELKLTW
Sbjct: 507 LIELKLTW 514


>ref|XP_003593434.1| B3 domain-containing transcription repressor VAL2 [Medicago
           truncatula] gi|355482482|gb|AES63685.1| B3
           domain-containing transcription repressor VAL2 [Medicago
           truncatula]
          Length = 888

 Score =  146 bits (368), Expect = 2e-33
 Identities = 71/128 (55%), Positives = 95/128 (74%)
 Frame = -1

Query: 387 SKGRQYILEGLAPCFQPMQQQAGDTVTFSRIDPEGKLVIGFRKAASVPPPDQDQQSLKCG 208
           +  R Y+LEG+ PC Q MQ QAGDTVTFSR++PEG+LV+GFRKA +  P DQD ++ K G
Sbjct: 401 NNSRMYVLEGVTPCIQSMQLQAGDTVTFSRLEPEGRLVMGFRKATNPLPSDQDNEANKTG 460

Query: 207 SGVSKDSEVKAADPVGTWSKIDRSGYIAKDVAGAKLFISNRRKSSSLAYKCKRRRTDNED 28
           +G S   EV+ ADP  +WS +D+SGYIAK+  G+K  IS +RK++ L  K KR + +NED
Sbjct: 461 NGFSA-PEVELADP-SSWSNVDKSGYIAKEALGSKSLISRKRKNNILGSKSKRLKIENED 518

Query: 27  LIELKLTW 4
           +IELK+TW
Sbjct: 519 IIELKITW 526


>ref|XP_004155579.1| PREDICTED: LOW QUALITY PROTEIN: B3 domain-containing protein
           Os07g0563300-like [Cucumis sativus]
          Length = 899

 Score =  145 bits (365), Expect = 4e-33
 Identities = 72/128 (56%), Positives = 95/128 (74%)
 Frame = -1

Query: 387 SKGRQYILEGLAPCFQPMQQQAGDTVTFSRIDPEGKLVIGFRKAASVPPPDQDQQSLKCG 208
           +  R Y+LEG+ PC Q MQ QAGDTVTFSR++PEGKLV+GFRKA++    + +    K G
Sbjct: 406 NNSRMYVLEGVTPCIQSMQLQAGDTVTFSRLEPEGKLVMGFRKASATADQENETNKTKNG 465

Query: 207 SGVSKDSEVKAADPVGTWSKIDRSGYIAKDVAGAKLFISNRRKSSSLAYKCKRRRTDNED 28
           + V  D+E+  ADP  +W+K+D+SGYIAK+V GAK  IS +RK+S+L  K KR R DNED
Sbjct: 466 APVHGDAEL--ADP-NSWTKVDKSGYIAKEVLGAKPSISRKRKNSTLGSKSKRLRIDNED 522

Query: 27  LIELKLTW 4
           +IELK+TW
Sbjct: 523 MIELKITW 530


>ref|XP_004134723.1| PREDICTED: B3 domain-containing protein Os07g0563300-like [Cucumis
           sativus]
          Length = 896

 Score =  145 bits (365), Expect = 4e-33
 Identities = 72/128 (56%), Positives = 95/128 (74%)
 Frame = -1

Query: 387 SKGRQYILEGLAPCFQPMQQQAGDTVTFSRIDPEGKLVIGFRKAASVPPPDQDQQSLKCG 208
           +  R Y+LEG+ PC Q MQ QAGDTVTFSR++PEGKLV+GFRKA++    + +    K G
Sbjct: 403 NNSRMYVLEGVTPCIQSMQLQAGDTVTFSRLEPEGKLVMGFRKASATADQENETNKTKNG 462

Query: 207 SGVSKDSEVKAADPVGTWSKIDRSGYIAKDVAGAKLFISNRRKSSSLAYKCKRRRTDNED 28
           + V  D+E+  ADP  +W+K+D+SGYIAK+V GAK  IS +RK+S+L  K KR R DNED
Sbjct: 463 APVHGDAEL--ADP-NSWTKVDKSGYIAKEVLGAKPSISRKRKNSTLGSKSKRLRIDNED 519

Query: 27  LIELKLTW 4
           +IELK+TW
Sbjct: 520 MIELKITW 527


>ref|XP_002305001.1| predicted protein [Populus trichocarpa] gi|222847965|gb|EEE85512.1|
           predicted protein [Populus trichocarpa]
          Length = 918

 Score =  144 bits (364), Expect = 6e-33
 Identities = 74/128 (57%), Positives = 93/128 (72%)
 Frame = -1

Query: 387 SKGRQYILEGLAPCFQPMQQQAGDTVTFSRIDPEGKLVIGFRKAASVPPPDQDQQSLKCG 208
           +  R Y+LEG+ PC Q MQ QAGD VTFSR++PEGKLV+GFRKA S PP DQD ++ + G
Sbjct: 419 NNSRMYVLEGVTPCIQNMQLQAGDIVTFSRLEPEGKLVMGFRKATSAPPSDQDNETSQTG 478

Query: 207 SGVSKDSEVKAADPVGTWSKIDRSGYIAKDVAGAKLFISNRRKSSSLAYKCKRRRTDNED 28
           +GVS   + +  DP   WSK+D+SGYIAK+V   K  I  +RKSS+L  K KR R +NED
Sbjct: 479 NGVSTKGDAE-LDP-SPWSKVDKSGYIAKEVLEGKSSI-RKRKSSTLGSKSKRLRIENED 535

Query: 27  LIELKLTW 4
           +IELKLTW
Sbjct: 536 MIELKLTW 543


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