BLASTX nr result

ID: Coptis23_contig00033162 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00033162
         (305 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ADE77370.1| unknown [Picea sitchensis]                             138   4e-31
ref|XP_002529080.1| ATP-binding cassette transporter, putative [...   136   2e-30
gb|AAG50592.1|AC083891_6 ABC transporter, putative [Arabidopsis ...   130   8e-29
dbj|BAD07484.1| PDR-type ABC transporter 2 [Nicotiana tabacum]        130   8e-29
emb|CBI20978.3| unnamed protein product [Vitis vinifera]              130   8e-29

>gb|ADE77370.1| unknown [Picea sitchensis]
          Length = 412

 Score =  138 bits (348), Expect = 4e-31
 Identities = 65/99 (65%), Positives = 78/99 (78%)
 Frame = +2

Query: 5   HSQELIEYFEAVDCVPKITPGYNPATWMLESSSAGSENLLGVDFADIFLESPLYQRNKAL 184
           HS +LIEYFEA+  VPKI  GYNPATWMLE SS  +E  LGVDFA+++  SPL+QRN+AL
Sbjct: 50  HSYKLIEYFEAIPGVPKIRDGYNPATWMLEISSPAAETHLGVDFAEVYSNSPLFQRNQAL 109

Query: 185 IEELQKAVPGSEDIHFKTVFSQSFWVQIKACLWKQYWSY 301
           I+EL   VPGS D++F T +SQSF VQ  ACLWKQ+WSY
Sbjct: 110 IKELSTPVPGSRDLYFPTKYSQSFRVQCIACLWKQHWSY 148


>ref|XP_002529080.1| ATP-binding cassette transporter, putative [Ricinus communis]
            gi|223531492|gb|EEF33324.1| ATP-binding cassette
            transporter, putative [Ricinus communis]
          Length = 1444

 Score =  136 bits (342), Expect = 2e-30
 Identities = 64/99 (64%), Positives = 75/99 (75%)
 Frame = +2

Query: 5    HSQELIEYFEAVDCVPKITPGYNPATWMLESSSAGSENLLGVDFADIFLESPLYQRNKAL 184
            HS +L+EYFEAV  VPKI  GYNPATWMLE SS   E+ LGVDFADI+  S LYQRN+ L
Sbjct: 1083 HSHKLVEYFEAVPGVPKIKDGYNPATWMLEISSIAVESQLGVDFADIYANSDLYQRNQEL 1142

Query: 185  IEELQKAVPGSEDIHFKTVFSQSFWVQIKACLWKQYWSY 301
            I+EL    PGS+D++F T +SQ+F  Q KAC WKQYWSY
Sbjct: 1143 IKELSTPPPGSKDLYFPTKYSQNFVTQCKACFWKQYWSY 1181


>gb|AAG50592.1|AC083891_6 ABC transporter, putative [Arabidopsis thaliana]
          Length = 1434

 Score =  130 bits (328), Expect = 8e-29
 Identities = 58/99 (58%), Positives = 76/99 (76%)
 Frame = +2

Query: 5    HSQELIEYFEAVDCVPKITPGYNPATWMLESSSAGSENLLGVDFADIFLESPLYQRNKAL 184
            HSQ+L+EYFEAV+ VPKI  GYNPATWML+ ++   E+ + +DFA IF  S LY+RN+ L
Sbjct: 1073 HSQKLVEYFEAVEGVPKINDGYNPATWMLDVTTPSMESQMSLDFAQIFSNSSLYRRNQEL 1132

Query: 185  IEELQKAVPGSEDIHFKTVFSQSFWVQIKACLWKQYWSY 301
            I++L    PGS+D++FKT ++QSF  Q KAC WKQYWSY
Sbjct: 1133 IKDLSTPPPGSKDVYFKTKYAQSFSTQTKACFWKQYWSY 1171


>dbj|BAD07484.1| PDR-type ABC transporter 2 [Nicotiana tabacum]
          Length = 1078

 Score =  130 bits (328), Expect = 8e-29
 Identities = 60/99 (60%), Positives = 74/99 (74%)
 Frame = +2

Query: 5    HSQELIEYFEAVDCVPKITPGYNPATWMLESSSAGSENLLGVDFADIFLESPLYQRNKAL 184
            HS  LI+YFE+   V KI  GYNPATWMLE +++  E +LGVDF D++  S LY+RNKAL
Sbjct: 721  HSCHLIKYFESNPGVAKIKEGYNPATWMLEVTASAQEMMLGVDFTDVYKNSDLYRRNKAL 780

Query: 185  IEELQKAVPGSEDIHFKTVFSQSFWVQIKACLWKQYWSY 301
            I EL    PGS+D+HF+T +SQSFW Q  ACLWKQ+WSY
Sbjct: 781  ISELGVPRPGSKDLHFETQYSQSFWTQCMACLWKQHWSY 819


>emb|CBI20978.3| unnamed protein product [Vitis vinifera]
          Length = 1436

 Score =  130 bits (328), Expect = 8e-29
 Identities = 59/99 (59%), Positives = 74/99 (74%)
 Frame = +2

Query: 5    HSQELIEYFEAVDCVPKITPGYNPATWMLESSSAGSENLLGVDFADIFLESPLYQRNKAL 184
            HS  LI+YFE +D V KI  GYNPATWMLE +SA  E  LG++F D++  S LY+RNKAL
Sbjct: 1079 HSAHLIKYFEGIDGVSKIKDGYNPATWMLEVTSAAQEAALGINFTDVYKNSELYRRNKAL 1138

Query: 185  IEELQKAVPGSEDIHFKTVFSQSFWVQIKACLWKQYWSY 301
            I+EL    PGS+D++F T +SQSF+ Q K CLWKQ+WSY
Sbjct: 1139 IKELSTPPPGSKDLYFPTQYSQSFFAQCKTCLWKQHWSY 1177


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