BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00033160
         (482 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI35966.3| unnamed protein product [Vitis vinifera]              155   2e-36
ref|XP_002531859.1| Cell division protein ftsH, putative [Ricinu...   124   8e-27
emb|CBI14948.3| unnamed protein product [Vitis vinifera]              119   2e-25
ref|XP_002277458.1| PREDICTED: pentatricopeptide repeat-containi...   119   2e-25
ref|XP_004148551.1| PREDICTED: pentatricopeptide repeat-containi...   117   1e-24

>emb|CBI35966.3| unnamed protein product [Vitis vinifera]
          Length = 624

 Score =  155 bits (393), Expect = 2e-36
 Identities = 74/160 (46%), Positives = 105/160 (65%)
 Frame = +1

Query: 1   NLLNNSTHITKIYQIHAQIIIHGXXXXXXXXXXXXXXGNLDYASSVFKISDHDDDYSWNV 180
           +LL  +T +T+I+QIHAQ +IHG               ++DYA  V   +    D+SWN 
Sbjct: 4   SLLRTATSLTQIHQIHAQTLIHGLPLQTHLIPKLIDLHSIDYARFVLDQTPSPTDFSWNS 63

Query: 181 MIKRYTLNASPHNSVFMYNEMLRNDVRPSNFTYPFLLKACSARFAIKEGEQVHAHVVKFG 360
           +I+ YT++ SP NS+F+Y +MLR+  +PSNFT+PF+LKACS   ++ EGEQ+H HV++ G
Sbjct: 64  LIRAYTVHGSPQNSLFLYLKMLRSSTKPSNFTFPFVLKACSTLGSVLEGEQIHTHVLRLG 123

Query: 361 FQLDLYVNNTLIDMYSKCSCVEYAHRVLDEMRDIDEVSWN 480
           F  DL+V N+LIDMY KC  ++ A    D+M   DEVSWN
Sbjct: 124 FGSDLFVCNSLIDMYCKCFRLDSARNFWDDMGFRDEVSWN 163



 Score = 58.5 bits (140), Expect = 5e-07
 Identities = 28/104 (26%), Positives = 52/104 (50%)
 Frame = +1

Query: 169 SWNVMIKRYTLNASPHNSVFMYNEMLRNDVRPSNFTYPFLLKACSARFAIKEGEQVHAHV 348
           SWN +I           ++ +Y  M    V+P+  T   +L AC+   A++ G +VH ++
Sbjct: 296 SWNAIITGCVQGGLLEEAIDLYRHMKAQSVKPNEITLVNVLSACAGLGALELGREVHLYL 355

Query: 349 VKFGFQLDLYVNNTLIDMYSKCSCVEYAHRVLDEMRDIDEVSWN 480
            + G  L++ +   L+DMY+KC  ++ A  +  +  + D   WN
Sbjct: 356 GRNGLDLNVILATALVDMYAKCGKIDDACLIFVKTSEKDVALWN 399


>ref|XP_002531859.1| Cell division protein ftsH, putative [Ricinus communis]
            gi|223528509|gb|EEF30537.1| Cell division protein ftsH,
            putative [Ricinus communis]
          Length = 1157

 Score =  124 bits (311), Expect = 8e-27
 Identities = 63/166 (37%), Positives = 93/166 (56%), Gaps = 6/166 (3%)
 Frame = +1

Query: 1    NLLNNSTHITKIYQIHAQIIIHGXXXXXXXXXXXXXXGNLD------YASSVFKISDHDD 162
            +LL   + I  +YQIH+QI + G               +L       YA S+   S H  
Sbjct: 669  SLLKLCSSIKHLYQIHSQIQVSGLQGDTFLVTQLIKFSSLSPSKDLSYAQSILDHSVHPV 728

Query: 163  DYSWNVMIKRYTLNASPHNSVFMYNEMLRNDVRPSNFTYPFLLKACSARFAIKEGEQVHA 342
               WN++I+ Y  + +P +++F+Y  M    +RP++ T+PFLLKAC+A FA KEG+QVH 
Sbjct: 729  PLPWNILIRGYADSNTPKDALFVYRNMRNEGIRPNSLTFPFLLKACAACFATKEGKQVHV 788

Query: 343  HVVKFGFQLDLYVNNTLIDMYSKCSCVEYAHRVLDEMRDIDEVSWN 480
             V+K+G   D+YVNN L++ Y  C  +  A +V DEM +   VSWN
Sbjct: 789  EVIKYGLDCDVYVNNNLVNFYGSCKKILDACKVFDEMPERTVVSWN 834


>emb|CBI14948.3| unnamed protein product [Vitis vinifera]
          Length = 401

 Score =  119 bits (299), Expect = 2e-25
 Identities = 55/122 (45%), Positives = 80/122 (65%)
 Frame = +1

Query: 115 NLDYASSVFKISDHDDDYSWNVMIKRYTLNASPHNSVFMYNEMLRNDVRPSNFTYPFLLK 294
           ++DYA S+F+  D  D  ++N+MI+ +TL  SPH ++ ++ EM  N V+P  FT+P +LK
Sbjct: 73  SMDYAVSIFRQIDEPDSPAYNIMIRGFTLKQSPHEAILLFKEMHENSVQPDEFTFPCILK 132

Query: 295 ACSARFAIKEGEQVHAHVVKFGFQLDLYVNNTLIDMYSKCSCVEYAHRVLDEMRDIDEVS 474
            CS   A+ EGEQ+HA ++K GF    +V NTLI MY+ C  VE A RV DEM + +  +
Sbjct: 133 VCSRLQALSEGEQIHALIMKCGFGSHGFVKNTLIHMYANCGEVEVARRVFDEMSERNVRT 192

Query: 475 WN 480
           WN
Sbjct: 193 WN 194


>ref|XP_002277458.1| PREDICTED: pentatricopeptide repeat-containing protein At1g08070
           [Vitis vinifera]
          Length = 698

 Score =  119 bits (299), Expect = 2e-25
 Identities = 55/122 (45%), Positives = 80/122 (65%)
 Frame = +1

Query: 115 NLDYASSVFKISDHDDDYSWNVMIKRYTLNASPHNSVFMYNEMLRNDVRPSNFTYPFLLK 294
           ++DYA S+F+  D  D  ++N+MI+ +TL  SPH ++ ++ EM  N V+P  FT+P +LK
Sbjct: 73  SMDYAVSIFRQIDEPDSPAYNIMIRGFTLKQSPHEAILLFKEMHENSVQPDEFTFPCILK 132

Query: 295 ACSARFAIKEGEQVHAHVVKFGFQLDLYVNNTLIDMYSKCSCVEYAHRVLDEMRDIDEVS 474
            CS   A+ EGEQ+HA ++K GF    +V NTLI MY+ C  VE A RV DEM + +  +
Sbjct: 133 VCSRLQALSEGEQIHALIMKCGFGSHGFVKNTLIHMYANCGEVEVARRVFDEMSERNVRT 192

Query: 475 WN 480
           WN
Sbjct: 193 WN 194



 Score = 66.2 bits (160), Expect = 3e-09
 Identities = 37/123 (30%), Positives = 65/123 (52%)
 Frame = +1

Query: 112 GNLDYASSVFKISDHDDDYSWNVMIKRYTLNASPHNSVFMYNEMLRNDVRPSNFTYPFLL 291
           G ++ A  VF      +  +WN M   YT + +    V +++EML  D+R    T   +L
Sbjct: 173 GEVEVARRVFDEMSERNVRTWNSMFAGYTKSGNWEEVVKLFHEMLELDIRFDEVTLVSVL 232

Query: 292 KACSARFAIKEGEQVHAHVVKFGFQLDLYVNNTLIDMYSKCSCVEYAHRVLDEMRDIDEV 471
            AC     ++ GE ++ +V + G + +  +  +L+DMY+KC  V+ A R+ D+M   D V
Sbjct: 233 TACGRLADLELGEWINRYVEEKGLKGNPTLITSLVDMYAKCGQVDTARRLFDQMDRRDVV 292

Query: 472 SWN 480
           +W+
Sbjct: 293 AWS 295



 Score = 64.3 bits (155), Expect = 1e-08
 Identities = 33/122 (27%), Positives = 64/122 (52%)
 Frame = +1

Query: 112 GNLDYASSVFKISDHDDDYSWNVMIKRYTLNASPHNSVFMYNEMLRNDVRPSNFTYPFLL 291
           G +D A  +F   D  D  +W+ MI  Y+  +    ++ +++EM + ++ P+  T   +L
Sbjct: 274 GQVDTARRLFDQMDRRDVVAWSAMISGYSQASRCREALDLFHEMQKANIDPNEITMVSIL 333

Query: 292 KACSARFAIKEGEQVHAHVVKFGFQLDLYVNNTLIDMYSKCSCVEYAHRVLDEMRDIDEV 471
            +C+   A++ G+ VH  + K   +L + +   L+D Y+KC  VE +  V  +M   + +
Sbjct: 334 SSCAVLGALETGKWVHFFIKKKRMKLTVTLGTALMDFYAKCGSVESSIEVFGKMPVKNVL 393

Query: 472 SW 477
           SW
Sbjct: 394 SW 395


>ref|XP_004148551.1| PREDICTED: pentatricopeptide repeat-containing protein
           At2g36730-like [Cucumis sativus]
          Length = 516

 Score =  117 bits (293), Expect = 1e-24
 Identities = 62/167 (37%), Positives = 90/167 (53%), Gaps = 7/167 (4%)
 Frame = +1

Query: 1   NLLNNSTHITKIYQIHAQIIIHGXXXXXXXXXXXXXXG------NLDYASSV-FKISDHD 159
           +LLN+ +    +++IHAQI++ G                     NL Y  S+ F    H 
Sbjct: 35  SLLNHCSSTNHLFEIHAQILVSGLQNDSFFTTELLRVAALSPSRNLSYGCSLLFHCHFHS 94

Query: 160 DDYSWNVMIKRYTLNASPHNSVFMYNEMLRNDVRPSNFTYPFLLKACSARFAIKEGEQVH 339
               WN +I+ Y+ + SP  ++ ++ EM R  VRP+N T+PFLLKAC+    ++EG+Q H
Sbjct: 95  ATMPWNFIIRGYSSSDSPQEAISLFGEMRRRGVRPNNLTFPFLLKACATLATLQEGKQFH 154

Query: 340 AHVVKFGFQLDLYVNNTLIDMYSKCSCVEYAHRVLDEMRDIDEVSWN 480
           A  +K G  LD+YV NTLI  Y  C  +  A +V DEM +   VSWN
Sbjct: 155 AIAIKCGLDLDVYVRNTLIYFYGSCKRMSGARKVFDEMTERTLVSWN 201