BLASTX nr result
ID: Coptis23_contig00033158
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Coptis23_contig00033158 (382 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_002302058.1| predicted protein [Populus trichocarpa] gi|2... 59 5e-07 ref|XP_003632422.1| PREDICTED: poly [ADP-ribose] polymerase 1-li... 57 1e-06 emb|CBI37089.3| unnamed protein product [Vitis vinifera] 57 1e-06 ref|XP_002263185.1| PREDICTED: poly [ADP-ribose] polymerase 1-li... 57 1e-06 emb|CAN75718.1| hypothetical protein VITISV_037618 [Vitis vinifera] 57 1e-06 >ref|XP_002302058.1| predicted protein [Populus trichocarpa] gi|222843784|gb|EEE81331.1| predicted protein [Populus trichocarpa] Length = 996 Score = 58.5 bits (140), Expect = 5e-07 Identities = 27/50 (54%), Positives = 35/50 (70%), Gaps = 1/50 (2%) Frame = -1 Query: 382 CNGPIICSGDQYCCRGHL-EWSRCSYSSNSTTEACRLKGKWKVPEETSNE 236 C+G + SG Y C G+L EWS+CSYS T E RLKGKWK+P++T N+ Sbjct: 318 CSGSLHYSGGMYRCGGYLSEWSKCSYS---TREPARLKGKWKIPDDTDNQ 364 >ref|XP_003632422.1| PREDICTED: poly [ADP-ribose] polymerase 1-like isoform 2 [Vitis vinifera] Length = 992 Score = 57.4 bits (137), Expect = 1e-06 Identities = 27/50 (54%), Positives = 35/50 (70%), Gaps = 1/50 (2%) Frame = -1 Query: 382 CNGPIICSGDQYCCRGHLE-WSRCSYSSNSTTEACRLKGKWKVPEETSNE 236 C+ + SG Y C+G+L WS+CSYS T E R+KGKWK+PEETSN+ Sbjct: 315 CSSSLRYSGGMYRCQGYLSAWSKCSYS---TVEPERIKGKWKIPEETSNQ 361 >emb|CBI37089.3| unnamed protein product [Vitis vinifera] Length = 996 Score = 57.4 bits (137), Expect = 1e-06 Identities = 27/50 (54%), Positives = 35/50 (70%), Gaps = 1/50 (2%) Frame = -1 Query: 382 CNGPIICSGDQYCCRGHLE-WSRCSYSSNSTTEACRLKGKWKVPEETSNE 236 C+ + SG Y C+G+L WS+CSYS T E R+KGKWK+PEETSN+ Sbjct: 319 CSSSLRYSGGMYRCQGYLSAWSKCSYS---TVEPERIKGKWKIPEETSNQ 365 >ref|XP_002263185.1| PREDICTED: poly [ADP-ribose] polymerase 1-like isoform 1 [Vitis vinifera] Length = 984 Score = 57.4 bits (137), Expect = 1e-06 Identities = 27/50 (54%), Positives = 35/50 (70%), Gaps = 1/50 (2%) Frame = -1 Query: 382 CNGPIICSGDQYCCRGHLE-WSRCSYSSNSTTEACRLKGKWKVPEETSNE 236 C+ + SG Y C+G+L WS+CSYS T E R+KGKWK+PEETSN+ Sbjct: 307 CSSSLRYSGGMYRCQGYLSAWSKCSYS---TVEPERIKGKWKIPEETSNQ 353 >emb|CAN75718.1| hypothetical protein VITISV_037618 [Vitis vinifera] Length = 1016 Score = 57.4 bits (137), Expect = 1e-06 Identities = 27/50 (54%), Positives = 35/50 (70%), Gaps = 1/50 (2%) Frame = -1 Query: 382 CNGPIICSGDQYCCRGHLE-WSRCSYSSNSTTEACRLKGKWKVPEETSNE 236 C+ + SG Y C+G+L WS+CSYS T E R+KGKWK+PEETSN+ Sbjct: 305 CSSSLRYSGGMYRCQGYLSAWSKCSYS---TVEPERIKGKWKIPEETSNQ 351