BLASTX nr result

ID: Coptis23_contig00033158 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00033158
         (382 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002302058.1| predicted protein [Populus trichocarpa] gi|2...    59   5e-07
ref|XP_003632422.1| PREDICTED: poly [ADP-ribose] polymerase 1-li...    57   1e-06
emb|CBI37089.3| unnamed protein product [Vitis vinifera]               57   1e-06
ref|XP_002263185.1| PREDICTED: poly [ADP-ribose] polymerase 1-li...    57   1e-06
emb|CAN75718.1| hypothetical protein VITISV_037618 [Vitis vinifera]    57   1e-06

>ref|XP_002302058.1| predicted protein [Populus trichocarpa] gi|222843784|gb|EEE81331.1|
           predicted protein [Populus trichocarpa]
          Length = 996

 Score = 58.5 bits (140), Expect = 5e-07
 Identities = 27/50 (54%), Positives = 35/50 (70%), Gaps = 1/50 (2%)
 Frame = -1

Query: 382 CNGPIICSGDQYCCRGHL-EWSRCSYSSNSTTEACRLKGKWKVPEETSNE 236
           C+G +  SG  Y C G+L EWS+CSYS   T E  RLKGKWK+P++T N+
Sbjct: 318 CSGSLHYSGGMYRCGGYLSEWSKCSYS---TREPARLKGKWKIPDDTDNQ 364


>ref|XP_003632422.1| PREDICTED: poly [ADP-ribose] polymerase 1-like isoform 2 [Vitis
           vinifera]
          Length = 992

 Score = 57.4 bits (137), Expect = 1e-06
 Identities = 27/50 (54%), Positives = 35/50 (70%), Gaps = 1/50 (2%)
 Frame = -1

Query: 382 CNGPIICSGDQYCCRGHLE-WSRCSYSSNSTTEACRLKGKWKVPEETSNE 236
           C+  +  SG  Y C+G+L  WS+CSYS   T E  R+KGKWK+PEETSN+
Sbjct: 315 CSSSLRYSGGMYRCQGYLSAWSKCSYS---TVEPERIKGKWKIPEETSNQ 361


>emb|CBI37089.3| unnamed protein product [Vitis vinifera]
          Length = 996

 Score = 57.4 bits (137), Expect = 1e-06
 Identities = 27/50 (54%), Positives = 35/50 (70%), Gaps = 1/50 (2%)
 Frame = -1

Query: 382 CNGPIICSGDQYCCRGHLE-WSRCSYSSNSTTEACRLKGKWKVPEETSNE 236
           C+  +  SG  Y C+G+L  WS+CSYS   T E  R+KGKWK+PEETSN+
Sbjct: 319 CSSSLRYSGGMYRCQGYLSAWSKCSYS---TVEPERIKGKWKIPEETSNQ 365


>ref|XP_002263185.1| PREDICTED: poly [ADP-ribose] polymerase 1-like isoform 1 [Vitis
           vinifera]
          Length = 984

 Score = 57.4 bits (137), Expect = 1e-06
 Identities = 27/50 (54%), Positives = 35/50 (70%), Gaps = 1/50 (2%)
 Frame = -1

Query: 382 CNGPIICSGDQYCCRGHLE-WSRCSYSSNSTTEACRLKGKWKVPEETSNE 236
           C+  +  SG  Y C+G+L  WS+CSYS   T E  R+KGKWK+PEETSN+
Sbjct: 307 CSSSLRYSGGMYRCQGYLSAWSKCSYS---TVEPERIKGKWKIPEETSNQ 353


>emb|CAN75718.1| hypothetical protein VITISV_037618 [Vitis vinifera]
          Length = 1016

 Score = 57.4 bits (137), Expect = 1e-06
 Identities = 27/50 (54%), Positives = 35/50 (70%), Gaps = 1/50 (2%)
 Frame = -1

Query: 382 CNGPIICSGDQYCCRGHLE-WSRCSYSSNSTTEACRLKGKWKVPEETSNE 236
           C+  +  SG  Y C+G+L  WS+CSYS   T E  R+KGKWK+PEETSN+
Sbjct: 305 CSSSLRYSGGMYRCQGYLSAWSKCSYS---TVEPERIKGKWKIPEETSNQ 351


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