BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00033157
         (554 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002326594.1| predicted protein [Populus trichocarpa] gi|2...    67   1e-09
ref|XP_002308787.1| f-box family protein [Populus trichocarpa] g...    55   7e-06

>ref|XP_002326594.1| predicted protein [Populus trichocarpa] gi|222833916|gb|EEE72393.1|
           predicted protein [Populus trichocarpa]
          Length = 477

 Score = 67.4 bits (163), Expect = 1e-09
 Identities = 35/110 (31%), Positives = 56/110 (50%), Gaps = 2/110 (1%)
 Frame = +2

Query: 2   FGAIKPPTYADGETEQKDMFKSLGVVGGCLCFIDGNFDGRVEIWVMNNYGVEESWAKQYM 181
           F  +  P +     + +     LGV+GGCL F D       +IWVM  YGV+ESW K+++
Sbjct: 259 FQPVAAPPHLGPNDKDRTGDMMLGVLGGCLYFFDYPLGDSFDIWVMKQYGVQESWTKEFI 318

Query: 182 LRQELCGSLWHGG--RQVIKLRNGVLLLTQDRDEIGYYNHNEDTFRPIKI 325
           L+      +W+    R +  L NG +L++     +  YN  + +FR +KI
Sbjct: 319 LKNPSTDIIWYWDLYRPISLLSNGEILMSHKSKAMVSYNPEDRSFRFLKI 368


>ref|XP_002308787.1| f-box family protein [Populus trichocarpa]
           gi|222854763|gb|EEE92310.1| f-box family protein
           [Populus trichocarpa]
          Length = 396

 Score = 55.1 bits (131), Expect = 7e-06
 Identities = 25/58 (43%), Positives = 37/58 (63%), Gaps = 1/58 (1%)
 Frame = +2

Query: 38  ETEQKDMFKSLGVVGGCLCFIDGNFDGRVEIWVMNNYGVEESWAKQYMLRQ-ELCGSL 208
           E + K+ +  LGV+ GCLCF+      RV++W+M  YGV+ESW K + + Q E+ G L
Sbjct: 247 EYKDKNFYIDLGVLRGCLCFLANFLGERVDVWMMKEYGVKESWTKLFSVAQYEVIGFL 304