BLASTX nr result

ID: Coptis23_contig00033150 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00033150
         (305 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI19301.3| unnamed protein product [Vitis vinifera]               60   1e-07
ref|XP_002283694.2| PREDICTED: MADS-box transcription factor 27 ...    55   5e-06

>emb|CBI19301.3| unnamed protein product [Vitis vinifera]
          Length = 240

 Score = 60.5 bits (145), Expect = 1e-07
 Identities = 29/38 (76%), Positives = 32/38 (84%), Gaps = 1/38 (2%)
 Frame = +1

Query: 1   SVSEDLHFPIHLQLSQPEQQNYE-SPTRAAKLGRLQLQ 111
           S+ EDLH PIHLQL QP+QQNYE +P RA KLGRLQLQ
Sbjct: 203 SIGEDLHVPIHLQLCQPQQQNYETTPARATKLGRLQLQ 240


>ref|XP_002283694.2| PREDICTED: MADS-box transcription factor 27 [Vitis vinifera]
          Length = 320

 Score = 55.5 bits (132), Expect = 5e-06
 Identities = 26/37 (70%), Positives = 30/37 (81%), Gaps = 1/37 (2%)
 Frame = +1

Query: 1   SVSEDLHFPIHLQLSQPEQQNYE-SPTRAAKLGRLQL 108
           S+ EDLH PIHLQL QP+QQNYE +P RA KLGR Q+
Sbjct: 203 SIGEDLHVPIHLQLCQPQQQNYETTPARATKLGRCQV 239


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