BLASTX nr result

ID: Coptis23_contig00033128 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00033128
         (581 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002308898.1| condensin complex components subunit [Populu...   339   2e-91
ref|XP_003632691.1| PREDICTED: condensin complex subunit 1-like ...   334   7e-90
emb|CBI30096.3| unnamed protein product [Vitis vinifera]              334   7e-90
tpg|DAA63985.1| TPA: hypothetical protein ZEAMMB73_615268 [Zea m...   327   1e-87
ref|XP_002529162.1| condensin, putative [Ricinus communis] gi|22...   326   2e-87

>ref|XP_002308898.1| condensin complex components subunit [Populus trichocarpa]
            gi|222854874|gb|EEE92421.1| condensin complex components
            subunit [Populus trichocarpa]
          Length = 1334

 Score =  339 bits (869), Expect = 2e-91
 Identities = 166/193 (86%), Positives = 179/193 (92%)
 Frame = +3

Query: 3    KLCSNFGIMQKHPELHASAMLALCRFMIIDADFCEANLQLLFTIAENATSETVRSNCTIA 182
            KLC NF +MQK+PEL AS MLALCRFMIID DFC+ANLQLLFT+ E+A SETVRSNCTIA
Sbjct: 940  KLCRNFSLMQKYPELQASGMLALCRFMIIDPDFCDANLQLLFTVVESAPSETVRSNCTIA 999

Query: 183  LGDLAVRFPNLLEPWTENMYARLRDPSISVRRNAVLVLSHLILNDMMKVKGYINEMAVRL 362
            LGDLAVRFPNLLEPWTENMYARLRDPS+SVR+NAVLVLSHLILNDMMKVKGYINEMA+RL
Sbjct: 1000 LGDLAVRFPNLLEPWTENMYARLRDPSVSVRKNAVLVLSHLILNDMMKVKGYINEMAIRL 1059

Query: 363  EDEDERISSIAKLFFHESSKRGSNRIYNLLPDILSRLSNQNLKEEVFCNIMQFLIGSIKK 542
            EDE ERIS++AKLFFHE SK+GSN IYNLLPDIL +LSNQ LK E FCNIMQFLIGSIKK
Sbjct: 1060 EDEQERISNLAKLFFHELSKKGSNPIYNLLPDILGKLSNQELKRETFCNIMQFLIGSIKK 1119

Query: 543  DKQIESLVEKLCN 581
            DKQ+ESLVEKLCN
Sbjct: 1120 DKQMESLVEKLCN 1132


>ref|XP_003632691.1| PREDICTED: condensin complex subunit 1-like [Vitis vinifera]
          Length = 1346

 Score =  334 bits (856), Expect = 7e-90
 Identities = 164/193 (84%), Positives = 178/193 (92%)
 Frame = +3

Query: 3    KLCSNFGIMQKHPELHASAMLALCRFMIIDADFCEANLQLLFTIAENATSETVRSNCTIA 182
            KLC NF +MQK+PEL AS MLALCRFMIID +FCEANLQLLFT+ ENA SETVRSNCTI 
Sbjct: 935  KLCRNFSLMQKYPELQASGMLALCRFMIIDGNFCEANLQLLFTVVENAPSETVRSNCTIV 994

Query: 183  LGDLAVRFPNLLEPWTENMYARLRDPSISVRRNAVLVLSHLILNDMMKVKGYINEMAVRL 362
            LGDLAVRFPNLLEPWTENMYARL+D S+SVR+NAVLVLSHLILNDMMKVKGYINEMA+RL
Sbjct: 995  LGDLAVRFPNLLEPWTENMYARLQDSSVSVRKNAVLVLSHLILNDMMKVKGYINEMAMRL 1054

Query: 363  EDEDERISSIAKLFFHESSKRGSNRIYNLLPDILSRLSNQNLKEEVFCNIMQFLIGSIKK 542
            EDEDERIS++AKLFFHE SK+GSN IYNLLPDIL +L N+NLK E FCNIMQFLIGSIKK
Sbjct: 1055 EDEDERISNLAKLFFHELSKKGSNPIYNLLPDILGKLCNRNLKRESFCNIMQFLIGSIKK 1114

Query: 543  DKQIESLVEKLCN 581
            DKQ+ESLVEKLCN
Sbjct: 1115 DKQMESLVEKLCN 1127


>emb|CBI30096.3| unnamed protein product [Vitis vinifera]
          Length = 1290

 Score =  334 bits (856), Expect = 7e-90
 Identities = 164/193 (84%), Positives = 178/193 (92%)
 Frame = +3

Query: 3    KLCSNFGIMQKHPELHASAMLALCRFMIIDADFCEANLQLLFTIAENATSETVRSNCTIA 182
            KLC NF +MQK+PEL AS MLALCRFMIID +FCEANLQLLFT+ ENA SETVRSNCTI 
Sbjct: 866  KLCRNFSLMQKYPELQASGMLALCRFMIIDGNFCEANLQLLFTVVENAPSETVRSNCTIV 925

Query: 183  LGDLAVRFPNLLEPWTENMYARLRDPSISVRRNAVLVLSHLILNDMMKVKGYINEMAVRL 362
            LGDLAVRFPNLLEPWTENMYARL+D S+SVR+NAVLVLSHLILNDMMKVKGYINEMA+RL
Sbjct: 926  LGDLAVRFPNLLEPWTENMYARLQDSSVSVRKNAVLVLSHLILNDMMKVKGYINEMAMRL 985

Query: 363  EDEDERISSIAKLFFHESSKRGSNRIYNLLPDILSRLSNQNLKEEVFCNIMQFLIGSIKK 542
            EDEDERIS++AKLFFHE SK+GSN IYNLLPDIL +L N+NLK E FCNIMQFLIGSIKK
Sbjct: 986  EDEDERISNLAKLFFHELSKKGSNPIYNLLPDILGKLCNRNLKRESFCNIMQFLIGSIKK 1045

Query: 543  DKQIESLVEKLCN 581
            DKQ+ESLVEKLCN
Sbjct: 1046 DKQMESLVEKLCN 1058


>tpg|DAA63985.1| TPA: hypothetical protein ZEAMMB73_615268 [Zea mays]
          Length = 1388

 Score =  327 bits (837), Expect = 1e-87
 Identities = 159/193 (82%), Positives = 179/193 (92%)
 Frame = +3

Query: 3    KLCSNFGIMQKHPELHASAMLALCRFMIIDADFCEANLQLLFTIAENATSETVRSNCTIA 182
            KLC N  ++QK P+L ASAMLALCR MIIDA+FCEANLQ+LFT+AE+A SETVRSNCTIA
Sbjct: 918  KLCRNLALLQKFPDLQASAMLALCRLMIIDAEFCEANLQILFTVAESAPSETVRSNCTIA 977

Query: 183  LGDLAVRFPNLLEPWTENMYARLRDPSISVRRNAVLVLSHLILNDMMKVKGYINEMAVRL 362
            LGDLAVRFPNLL+PWTE +YARLRDPS+SVR+NAVLV+SHLILNDMMKVKGYINEMAVR+
Sbjct: 978  LGDLAVRFPNLLDPWTEYIYARLRDPSVSVRKNAVLVISHLILNDMMKVKGYINEMAVRI 1037

Query: 363  EDEDERISSIAKLFFHESSKRGSNRIYNLLPDILSRLSNQNLKEEVFCNIMQFLIGSIKK 542
            ED+DERISS+AKLFFHE SK+GSN IYNLLPDIL RL NQ+LKEE FCNIMQFLI SIKK
Sbjct: 1038 EDKDERISSLAKLFFHELSKKGSNPIYNLLPDILGRLCNQHLKEETFCNIMQFLINSIKK 1097

Query: 543  DKQIESLVEKLCN 581
            DKQ+E+LV+KLCN
Sbjct: 1098 DKQMEALVDKLCN 1110


>ref|XP_002529162.1| condensin, putative [Ricinus communis] gi|223531386|gb|EEF33221.1|
            condensin, putative [Ricinus communis]
          Length = 1346

 Score =  326 bits (836), Expect = 2e-87
 Identities = 160/193 (82%), Positives = 178/193 (92%)
 Frame = +3

Query: 3    KLCSNFGIMQKHPELHASAMLALCRFMIIDADFCEANLQLLFTIAENATSETVRSNCTIA 182
            KLC N  +MQ++P L ASAMLALCRFMIIDA FC+ANLQLLFT+ E+A SETVR+NCTIA
Sbjct: 940  KLCRNISLMQRYPILQASAMLALCRFMIIDAHFCDANLQLLFTVVESAPSETVRTNCTIA 999

Query: 183  LGDLAVRFPNLLEPWTENMYARLRDPSISVRRNAVLVLSHLILNDMMKVKGYINEMAVRL 362
            LGDLAVRFPNLLEPWTENMYARLRDPS+SVR+NAVLVLSHLILNDMMKVKGY+NEMA+ L
Sbjct: 1000 LGDLAVRFPNLLEPWTENMYARLRDPSVSVRKNAVLVLSHLILNDMMKVKGYLNEMALCL 1059

Query: 363  EDEDERISSIAKLFFHESSKRGSNRIYNLLPDILSRLSNQNLKEEVFCNIMQFLIGSIKK 542
            EDEDERIS++AKLFFHE SK+GSN +YNLLPDILS+LS QNL  E FCNIMQFLIGSIKK
Sbjct: 1060 EDEDERISNLAKLFFHELSKKGSNPVYNLLPDILSKLSAQNLNRESFCNIMQFLIGSIKK 1119

Query: 543  DKQIESLVEKLCN 581
            DKQ+E+LVEKLCN
Sbjct: 1120 DKQMEALVEKLCN 1132


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