BLASTX nr result

ID: Coptis23_contig00033117 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00033117
         (237 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002313756.1| predicted protein [Populus trichocarpa] gi|2...   136   2e-30
ref|NP_565505.1| Rossmann-fold NAD(P)-binding domain-containing ...   134   8e-30
ref|XP_002513002.1| conserved hypothetical protein [Ricinus comm...   134   1e-29
ref|XP_002880372.1| hypothetical protein ARALYDRAFT_900542 [Arab...   132   3e-29
gb|AFK47694.1| unknown [Lotus japonicus]                              131   7e-29

>ref|XP_002313756.1| predicted protein [Populus trichocarpa] gi|222850164|gb|EEE87711.1|
           predicted protein [Populus trichocarpa]
          Length = 350

 Score =  136 bits (343), Expect = 2e-30
 Identities = 64/78 (82%), Positives = 73/78 (93%)
 Frame = +3

Query: 3   FIGQRLVQRLHSDNHQVRVLTRSRSKAQLVFPVKDFPDIVIAEESEWKNCIEGSNAVVNL 182
           FIG+RLVQRLH+D H VRVLTRSRSKAQL+FPVK+FP I+IAEE +WK+CI+GSNAVVNL
Sbjct: 59  FIGKRLVQRLHADKHSVRVLTRSRSKAQLIFPVKEFPGILIAEERDWKDCIQGSNAVVNL 118

Query: 183 AGLPISTRWSSEIKKEIK 236
           AGLPISTRWS E+KKEIK
Sbjct: 119 AGLPISTRWSPEVKKEIK 136


>ref|NP_565505.1| Rossmann-fold NAD(P)-binding domain-containing protein [Arabidopsis
           thaliana] gi|11692898|gb|AAG40052.1|AF324701_1 At2g21280
           [Arabidopsis thaliana]
           gi|11908096|gb|AAG41477.1|AF326895_1 unknown protein
           [Arabidopsis thaliana]
           gi|12642906|gb|AAK00395.1|AF339713_1 unknown protein
           [Arabidopsis thaliana] gi|20197908|gb|AAD23676.2|
           expressed protein [Arabidopsis thaliana]
           gi|23397230|gb|AAN31897.1| unknown protein [Arabidopsis
           thaliana] gi|34787115|emb|CAD56855.1| SulA protein
           [Arabidopsis thaliana] gi|330252061|gb|AEC07155.1|
           Rossmann-fold NAD(P)-binding domain-containing protein
           [Arabidopsis thaliana]
          Length = 347

 Score =  134 bits (337), Expect = 8e-30
 Identities = 63/78 (80%), Positives = 71/78 (91%)
 Frame = +3

Query: 3   FIGQRLVQRLHSDNHQVRVLTRSRSKAQLVFPVKDFPDIVIAEESEWKNCIEGSNAVVNL 182
           FIG+RLVQRL +DNH +RVLTRS+SKA+ +FP KDFP IVIAEESEWKNC++GS AVVNL
Sbjct: 56  FIGRRLVQRLRADNHAIRVLTRSKSKAEQIFPAKDFPGIVIAEESEWKNCVQGSTAVVNL 115

Query: 183 AGLPISTRWSSEIKKEIK 236
           AGLPISTRWS EIKKEIK
Sbjct: 116 AGLPISTRWSPEIKKEIK 133


>ref|XP_002513002.1| conserved hypothetical protein [Ricinus communis]
           gi|223548013|gb|EEF49505.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 351

 Score =  134 bits (336), Expect = 1e-29
 Identities = 64/78 (82%), Positives = 72/78 (92%)
 Frame = +3

Query: 3   FIGQRLVQRLHSDNHQVRVLTRSRSKAQLVFPVKDFPDIVIAEESEWKNCIEGSNAVVNL 182
           FIG+RLVQRLH+DNH + VLTRS+SKAQL+FP KDFP IVIAEE EWKN I+GS+AVVNL
Sbjct: 61  FIGRRLVQRLHADNHNIHVLTRSKSKAQLIFPGKDFPRIVIAEEPEWKNSIQGSDAVVNL 120

Query: 183 AGLPISTRWSSEIKKEIK 236
           AG+PISTRWSSEIKKEIK
Sbjct: 121 AGMPISTRWSSEIKKEIK 138


>ref|XP_002880372.1| hypothetical protein ARALYDRAFT_900542 [Arabidopsis lyrata subsp.
           lyrata] gi|297326211|gb|EFH56631.1| hypothetical protein
           ARALYDRAFT_900542 [Arabidopsis lyrata subsp. lyrata]
          Length = 350

 Score =  132 bits (332), Expect = 3e-29
 Identities = 61/78 (78%), Positives = 71/78 (91%)
 Frame = +3

Query: 3   FIGQRLVQRLHSDNHQVRVLTRSRSKAQLVFPVKDFPDIVIAEESEWKNCIEGSNAVVNL 182
           FIG++LVQRL +DNH +RVLTRS+SKA+ +FP KDFP IVIAEES+WKNC++GS AVVNL
Sbjct: 59  FIGRKLVQRLRADNHSIRVLTRSKSKAEQIFPAKDFPGIVIAEESDWKNCVQGSTAVVNL 118

Query: 183 AGLPISTRWSSEIKKEIK 236
           AGLPISTRWS EIKKEIK
Sbjct: 119 AGLPISTRWSPEIKKEIK 136


>gb|AFK47694.1| unknown [Lotus japonicus]
          Length = 349

 Score =  131 bits (329), Expect = 7e-29
 Identities = 63/78 (80%), Positives = 71/78 (91%)
 Frame = +3

Query: 3   FIGQRLVQRLHSDNHQVRVLTRSRSKAQLVFPVKDFPDIVIAEESEWKNCIEGSNAVVNL 182
           FIG+RLVQ+LH++NH V VLTRS+SKA+L+FPVKDFP I IAEESEWKN I+GS  VVNL
Sbjct: 58  FIGRRLVQKLHAENHGVHVLTRSKSKAELIFPVKDFPGIKIAEESEWKNSIQGSTGVVNL 117

Query: 183 AGLPISTRWSSEIKKEIK 236
           AGLPISTRWSSEIKKEIK
Sbjct: 118 AGLPISTRWSSEIKKEIK 135


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