BLASTX nr result

ID: Coptis23_contig00033112 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00033112
         (225 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI25615.3| unnamed protein product [Vitis vinifera]              117   1e-24
ref|XP_002264232.1| PREDICTED: WD repeat-containing protein 76-l...   117   1e-24
ref|XP_002523525.1| protein with unknown function [Ricinus commu...   117   1e-24
ref|XP_004162450.1| PREDICTED: WD repeat-containing protein 76-l...   114   6e-24
ref|XP_004146731.1| PREDICTED: WD repeat-containing protein 76-l...   114   6e-24

>emb|CBI25615.3| unnamed protein product [Vitis vinifera]
          Length = 450

 Score =  117 bits (293), Expect = 1e-24
 Identities = 54/72 (75%), Positives = 62/72 (86%), Gaps = 2/72 (2%)
 Frame = -3

Query: 223 ISSFRAIWGWDDTYLFVGNMKRAVDVISTD--RDITTLQSSDMSAIPCRFAAHPYKVGTL 50
           ISSFRAIWGWDD+YLF+GNMKR VD+IST   + + TLQS+ MSAIPCRF+AHPYKVG L
Sbjct: 376 ISSFRAIWGWDDSYLFIGNMKRGVDIISTACRKTVMTLQSAHMSAIPCRFSAHPYKVGML 435

Query: 49  AAATSGGQIYVW 14
           A AT GGQIY+W
Sbjct: 436 AGATGGGQIYMW 447


>ref|XP_002264232.1| PREDICTED: WD repeat-containing protein 76-like [Vitis vinifera]
          Length = 489

 Score =  117 bits (293), Expect = 1e-24
 Identities = 54/72 (75%), Positives = 62/72 (86%), Gaps = 2/72 (2%)
 Frame = -3

Query: 223 ISSFRAIWGWDDTYLFVGNMKRAVDVISTD--RDITTLQSSDMSAIPCRFAAHPYKVGTL 50
           ISSFRAIWGWDD+YLF+GNMKR VD+IST   + + TLQS+ MSAIPCRF+AHPYKVG L
Sbjct: 415 ISSFRAIWGWDDSYLFIGNMKRGVDIISTACRKTVMTLQSAHMSAIPCRFSAHPYKVGML 474

Query: 49  AAATSGGQIYVW 14
           A AT GGQIY+W
Sbjct: 475 AGATGGGQIYMW 486


>ref|XP_002523525.1| protein with unknown function [Ricinus communis]
           gi|223537232|gb|EEF38864.1| protein with unknown
           function [Ricinus communis]
          Length = 530

 Score =  117 bits (293), Expect = 1e-24
 Identities = 55/75 (73%), Positives = 61/75 (81%), Gaps = 2/75 (2%)
 Frame = -3

Query: 223 ISSFRAIWGWDDTYLFVGNMKRAVDVISTD--RDITTLQSSDMSAIPCRFAAHPYKVGTL 50
           ISSFRAIWGWDD+Y+F+GNMKR VD+IS    R I TLQS  MSAIPCRF AHPY VG L
Sbjct: 456 ISSFRAIWGWDDSYIFIGNMKRGVDIISRPQRRAILTLQSPHMSAIPCRFDAHPYNVGML 515

Query: 49  AAATSGGQIYVWTQS 5
           A ATSGGQ+Y+WT S
Sbjct: 516 AGATSGGQVYIWTSS 530


>ref|XP_004162450.1| PREDICTED: WD repeat-containing protein 76-like [Cucumis sativus]
          Length = 521

 Score =  114 bits (286), Expect = 6e-24
 Identities = 54/75 (72%), Positives = 62/75 (82%), Gaps = 2/75 (2%)
 Frame = -3

Query: 223 ISSFRAIWGWDDTYLFVGNMKRAVDVISTD--RDITTLQSSDMSAIPCRFAAHPYKVGTL 50
           ISSFRAIWGWDD+Y+F+GNMKRAVDVIS    + +  LQS  +SAIPCRF AHPY VGTL
Sbjct: 444 ISSFRAIWGWDDSYIFIGNMKRAVDVISRAYRKRVFVLQSPKISAIPCRFDAHPYDVGTL 503

Query: 49  AAATSGGQIYVWTQS 5
           A ATSGGQ+Y+WT S
Sbjct: 504 AGATSGGQVYMWTMS 518


>ref|XP_004146731.1| PREDICTED: WD repeat-containing protein 76-like [Cucumis sativus]
          Length = 545

 Score =  114 bits (286), Expect = 6e-24
 Identities = 54/75 (72%), Positives = 62/75 (82%), Gaps = 2/75 (2%)
 Frame = -3

Query: 223 ISSFRAIWGWDDTYLFVGNMKRAVDVISTD--RDITTLQSSDMSAIPCRFAAHPYKVGTL 50
           ISSFRAIWGWDD+Y+F+GNMKRAVDVIS    + +  LQS  +SAIPCRF AHPY VGTL
Sbjct: 468 ISSFRAIWGWDDSYIFIGNMKRAVDVISRAYRKRVFVLQSPKISAIPCRFDAHPYDVGTL 527

Query: 49  AAATSGGQIYVWTQS 5
           A ATSGGQ+Y+WT S
Sbjct: 528 AGATSGGQVYMWTMS 542


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