BLASTX nr result
ID: Coptis23_contig00033112
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Coptis23_contig00033112 (225 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value emb|CBI25615.3| unnamed protein product [Vitis vinifera] 117 1e-24 ref|XP_002264232.1| PREDICTED: WD repeat-containing protein 76-l... 117 1e-24 ref|XP_002523525.1| protein with unknown function [Ricinus commu... 117 1e-24 ref|XP_004162450.1| PREDICTED: WD repeat-containing protein 76-l... 114 6e-24 ref|XP_004146731.1| PREDICTED: WD repeat-containing protein 76-l... 114 6e-24 >emb|CBI25615.3| unnamed protein product [Vitis vinifera] Length = 450 Score = 117 bits (293), Expect = 1e-24 Identities = 54/72 (75%), Positives = 62/72 (86%), Gaps = 2/72 (2%) Frame = -3 Query: 223 ISSFRAIWGWDDTYLFVGNMKRAVDVISTD--RDITTLQSSDMSAIPCRFAAHPYKVGTL 50 ISSFRAIWGWDD+YLF+GNMKR VD+IST + + TLQS+ MSAIPCRF+AHPYKVG L Sbjct: 376 ISSFRAIWGWDDSYLFIGNMKRGVDIISTACRKTVMTLQSAHMSAIPCRFSAHPYKVGML 435 Query: 49 AAATSGGQIYVW 14 A AT GGQIY+W Sbjct: 436 AGATGGGQIYMW 447 >ref|XP_002264232.1| PREDICTED: WD repeat-containing protein 76-like [Vitis vinifera] Length = 489 Score = 117 bits (293), Expect = 1e-24 Identities = 54/72 (75%), Positives = 62/72 (86%), Gaps = 2/72 (2%) Frame = -3 Query: 223 ISSFRAIWGWDDTYLFVGNMKRAVDVISTD--RDITTLQSSDMSAIPCRFAAHPYKVGTL 50 ISSFRAIWGWDD+YLF+GNMKR VD+IST + + TLQS+ MSAIPCRF+AHPYKVG L Sbjct: 415 ISSFRAIWGWDDSYLFIGNMKRGVDIISTACRKTVMTLQSAHMSAIPCRFSAHPYKVGML 474 Query: 49 AAATSGGQIYVW 14 A AT GGQIY+W Sbjct: 475 AGATGGGQIYMW 486 >ref|XP_002523525.1| protein with unknown function [Ricinus communis] gi|223537232|gb|EEF38864.1| protein with unknown function [Ricinus communis] Length = 530 Score = 117 bits (293), Expect = 1e-24 Identities = 55/75 (73%), Positives = 61/75 (81%), Gaps = 2/75 (2%) Frame = -3 Query: 223 ISSFRAIWGWDDTYLFVGNMKRAVDVISTD--RDITTLQSSDMSAIPCRFAAHPYKVGTL 50 ISSFRAIWGWDD+Y+F+GNMKR VD+IS R I TLQS MSAIPCRF AHPY VG L Sbjct: 456 ISSFRAIWGWDDSYIFIGNMKRGVDIISRPQRRAILTLQSPHMSAIPCRFDAHPYNVGML 515 Query: 49 AAATSGGQIYVWTQS 5 A ATSGGQ+Y+WT S Sbjct: 516 AGATSGGQVYIWTSS 530 >ref|XP_004162450.1| PREDICTED: WD repeat-containing protein 76-like [Cucumis sativus] Length = 521 Score = 114 bits (286), Expect = 6e-24 Identities = 54/75 (72%), Positives = 62/75 (82%), Gaps = 2/75 (2%) Frame = -3 Query: 223 ISSFRAIWGWDDTYLFVGNMKRAVDVISTD--RDITTLQSSDMSAIPCRFAAHPYKVGTL 50 ISSFRAIWGWDD+Y+F+GNMKRAVDVIS + + LQS +SAIPCRF AHPY VGTL Sbjct: 444 ISSFRAIWGWDDSYIFIGNMKRAVDVISRAYRKRVFVLQSPKISAIPCRFDAHPYDVGTL 503 Query: 49 AAATSGGQIYVWTQS 5 A ATSGGQ+Y+WT S Sbjct: 504 AGATSGGQVYMWTMS 518 >ref|XP_004146731.1| PREDICTED: WD repeat-containing protein 76-like [Cucumis sativus] Length = 545 Score = 114 bits (286), Expect = 6e-24 Identities = 54/75 (72%), Positives = 62/75 (82%), Gaps = 2/75 (2%) Frame = -3 Query: 223 ISSFRAIWGWDDTYLFVGNMKRAVDVISTD--RDITTLQSSDMSAIPCRFAAHPYKVGTL 50 ISSFRAIWGWDD+Y+F+GNMKRAVDVIS + + LQS +SAIPCRF AHPY VGTL Sbjct: 468 ISSFRAIWGWDDSYIFIGNMKRAVDVISRAYRKRVFVLQSPKISAIPCRFDAHPYDVGTL 527 Query: 49 AAATSGGQIYVWTQS 5 A ATSGGQ+Y+WT S Sbjct: 528 AGATSGGQVYMWTMS 542