BLASTX nr result

ID: Coptis23_contig00033110 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00033110
         (426 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AFK38297.1| unknown [Lotus japonicus] gi|388514645|gb|AFK4538...   142   2e-32
ref|XP_003634175.1| PREDICTED: uncharacterized protein LOC100853...   142   2e-32
ref|XP_002318497.1| predicted protein [Populus trichocarpa] gi|1...   134   8e-30
ref|XP_002321357.1| predicted protein [Populus trichocarpa] gi|2...   130   9e-29
ref|XP_003523312.1| PREDICTED: uncharacterized protein LOC100781...   130   1e-28

>gb|AFK38297.1| unknown [Lotus japonicus] gi|388514645|gb|AFK45384.1| unknown
           [Lotus japonicus]
          Length = 158

 Score =  142 bits (359), Expect = 2e-32
 Identities = 64/114 (56%), Positives = 82/114 (71%), Gaps = 3/114 (2%)
 Frame = -2

Query: 386 EEDDDCVILDYDPFESIDVSNKLSIKENEKNVDEDD---VCIVAEKGQVAIRDYPHSRHL 216
           EE +DC IL +DP+ESI++  KLS+ E   + ++DD   + +VAEKGQVA RDYPHSRHL
Sbjct: 36  EETEDCFILGFDPYESIELC-KLSLDETNNHRNDDDAAEISVVAEKGQVACRDYPHSRHL 94

Query: 215 CVKLPFDTTPHHDYCGQCYCYVCDAAAPCKFWLNTLVGHCHATENCANWVSMRE 54
           C+K PF TTPH  YC  CYCYVCD+AAPCK+W    V HC A ++ A+W   R+
Sbjct: 95  CIKFPFTTTPHQSYCDMCYCYVCDSAAPCKYWTQLAVPHCDA-DSSASWKERRK 147


>ref|XP_003634175.1| PREDICTED: uncharacterized protein LOC100853301 [Vitis vinifera]
           gi|302143992|emb|CBI23097.3| unnamed protein product
           [Vitis vinifera]
          Length = 169

 Score =  142 bits (359), Expect = 2e-32
 Identities = 63/113 (55%), Positives = 80/113 (70%), Gaps = 2/113 (1%)
 Frame = -2

Query: 386 EEDDDCVILDYDPFESIDVSNKLSIKENEKNVDEDDVCIVAEKGQVAIRDYPHSRHLCVK 207
           EE  DC ILD+DPF+S    + LSI E   + D+ D+ ++++KGQVA RDYPH+RHLCVK
Sbjct: 51  EETQDCFILDFDPFDSNIHLSSLSITEEHADSDDADLHVISQKGQVACRDYPHARHLCVK 110

Query: 206 LPFDTTPH--HDYCGQCYCYVCDAAAPCKFWLNTLVGHCHATENCANWVSMRE 54
            PF+ TPH  + YC  CYCYVCD+AAPCK+W     GHCHATE  A+W   R+
Sbjct: 111 FPFEETPHERYYYCQLCYCYVCDSAAPCKYWTAPQPGHCHATEQDAHWKLQRK 163


>ref|XP_002318497.1| predicted protein [Populus trichocarpa] gi|118481451|gb|ABK92668.1|
           unknown [Populus trichocarpa]
           gi|222859170|gb|EEE96717.1| predicted protein [Populus
           trichocarpa]
          Length = 172

 Score =  134 bits (337), Expect = 8e-30
 Identities = 67/132 (50%), Positives = 85/132 (64%), Gaps = 5/132 (3%)
 Frame = -2

Query: 386 EEDDDCVILDYDPFESIDVS----NKLSIKE-NEKNVDEDDVCIVAEKGQVAIRDYPHSR 222
           EE +DC ILD+DP E ID S    + LS+   ++ + D  D+ +VAEKGQVA RDYPHSR
Sbjct: 46  EETEDCFILDFDPSE-IDTSIRRFSTLSVYSFSDDDGDGGDLSVVAEKGQVACRDYPHSR 104

Query: 221 HLCVKLPFDTTPHHDYCGQCYCYVCDAAAPCKFWLNTLVGHCHATENCANWVSMREAARP 42
           HLC+K PFD TPH  YC  CYCYVCD AAPCK W ++   HC+A+E   +W   R   R 
Sbjct: 105 HLCIKFPFDKTPHESYCELCYCYVCDCAAPCKDWKDSESAHCNASEKIGDWKEQRWLKR- 163

Query: 41  APAHDKTTLPSS 6
               ++  LP+S
Sbjct: 164 ---KEEIKLPNS 172


>ref|XP_002321357.1| predicted protein [Populus trichocarpa] gi|222868353|gb|EEF05484.1|
           predicted protein [Populus trichocarpa]
          Length = 139

 Score =  130 bits (328), Expect = 9e-29
 Identities = 59/118 (50%), Positives = 73/118 (61%), Gaps = 4/118 (3%)
 Frame = -2

Query: 386 EEDDDCVILDYDPFESIDVSNKLSIKENEKNVDE----DDVCIVAEKGQVAIRDYPHSRH 219
           +E +DC ILD+DP +     +++S        D+    DD+ +VAEKGQVA RDYPHSRH
Sbjct: 13  DEIEDCFILDFDPSDIDTSLHRISTLSVSSFTDDGGGVDDLSVVAEKGQVACRDYPHSRH 72

Query: 218 LCVKLPFDTTPHHDYCGQCYCYVCDAAAPCKFWLNTLVGHCHATENCANWVSMREAAR 45
           LC K PFD TPH  YC  CYCYVCD AAPCK W ++   HC A+E   +W   R   R
Sbjct: 73  LCTKYPFDKTPHESYCELCYCYVCDCAAPCKDWKDSKSAHCSASEKVGDWKEQRRLKR 130


>ref|XP_003523312.1| PREDICTED: uncharacterized protein LOC100781717 [Glycine max]
          Length = 148

 Score =  130 bits (327), Expect = 1e-28
 Identities = 58/99 (58%), Positives = 70/99 (70%)
 Frame = -2

Query: 386 EEDDDCVILDYDPFESIDVSNKLSIKENEKNVDEDDVCIVAEKGQVAIRDYPHSRHLCVK 207
           EE ++C +LD+DPF S+D S KLS+       D  DV I+AEKG+VA RDYPH RHLCVK
Sbjct: 37  EETEECFVLDFDPFHSLDFS-KLSL-------DHQDVSILAEKGEVACRDYPHPRHLCVK 88

Query: 206 LPFDTTPHHDYCGQCYCYVCDAAAPCKFWLNTLVGHCHA 90
            PF  TPH  YC  CYCYVCD+AAPCK+W  + + HC A
Sbjct: 89  FPFTATPHGSYCEMCYCYVCDSAAPCKYWNPSTLSHCDA 127


Top