BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00033100
         (318 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003525742.1| PREDICTED: putative pentatricopeptide repeat...   134   6e-30
ref|XP_003525738.1| PREDICTED: putative pentatricopeptide repeat...   133   1e-29
ref|XP_002272525.2| PREDICTED: putative pentatricopeptide repeat...   129   2e-28
ref|XP_003604673.1| hypothetical protein MTR_4g015760 [Medicago ...   126   2e-27
ref|XP_002882172.1| predicted protein [Arabidopsis lyrata subsp....   120   2e-25

>ref|XP_003525742.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At3g01580-like [Glycine max]
          Length = 700

 Score =  134 bits (338), Expect = 6e-30
 Identities = 63/105 (60%), Positives = 79/105 (75%)
 Frame = -3

Query: 316 VHGFVIRMGFNTCLSLVNSLLNMYAKTGSVDNARKLFGLMDEKDIVSWSSMIGCYTQNGK 137
           VHGFV R GF+T L L NS+LN+Y KTGS+ +A  LF  M  KDI+SWSSM+ CY  NG 
Sbjct: 229 VHGFVKRRGFDTKLCLANSILNLYGKTGSIRSAANLFREMPYKDIISWSSMVACYADNGA 288

Query: 136 TTEALGLFNEMVEKRVEFNSVTVVSALQACAVACNISEGRRIHEL 2
            T AL LFNEM++KR+E N VTV+SAL+ACA + N+ EG+ IH+L
Sbjct: 289 ETNALNLFNEMIDKRIELNRVTVISALRACASSSNLEEGKHIHKL 333



 Score = 77.4 bits (189), Expect = 1e-12
 Identities = 45/100 (45%), Positives = 61/100 (61%), Gaps = 1/100 (1%)
 Frame = -3

Query: 316 VHGFVIRMGFNTCLSLVNSLLNMYAKTGSVDNARKLFGLMDEKDIVSWSSMIGCYTQNGK 137
           +H FV + GF+    +  SL+ +YAK  S+DNA K+F  M  KD+V+WSS+I  Y  +G+
Sbjct: 431 LHAFVSKSGFDNNEFIGASLIELYAKCSSIDNANKVFKGMRRKDVVTWSSIIAAYGFHGQ 490

Query: 136 TTEALGLFNEMV-EKRVEFNSVTVVSALQACAVACNISEG 20
             EAL LF +M     V+ N VT VS L AC+ A  I EG
Sbjct: 491 GEEALKLFYQMSNHSDVKPNDVTFVSILSACSHAGLIEEG 530



 Score = 68.6 bits (166), Expect = 5e-10
 Identities = 36/104 (34%), Positives = 64/104 (61%), Gaps = 1/104 (0%)
 Frame = -3

Query: 316 VHGFVIRMGFNTCLSLVNSLLNMYAKTGSVDNARKLFGLMDEKDIVSWSSMIGCYTQNGK 137
           +HGF+ +   +  + + ++L+ +Y+K G +++A K+F    ++D+V W+S+I  Y QNG 
Sbjct: 127 IHGFLKKKKIDNDMFVGSALIELYSKCGQMNDAVKVFTEYPKQDVVLWTSIITGYEQNGS 186

Query: 136 TTEALGLFNEMVE-KRVEFNSVTVVSALQACAVACNISEGRRIH 8
              AL  F+ MV  ++V  + VT+VSA  ACA   + + GR +H
Sbjct: 187 PELALAFFSRMVVLEQVSPDPVTLVSAASACAQLSDFNLGRSVH 230



 Score = 55.5 bits (132), Expect = 5e-06
 Identities = 28/103 (27%), Positives = 53/103 (51%)
 Frame = -3

Query: 316 VHGFVIRMGFNTCLSLVNSLLNMYAKTGSVDNARKLFGLMDEKDIVSWSSMIGCYTQNGK 137
           +H   +  GF   +++  +L++MY K  S  NA  LF  M +KD+VSW+ +   Y + G 
Sbjct: 330 IHKLAVNYGFELDITVSTALMDMYMKCFSPKNAIDLFNRMPKKDVVSWAVLFSGYAEIGM 389

Query: 136 TTEALGLFNEMVEKRVEFNSVTVVSALQACAVACNISEGRRIH 8
             ++LG+F  M+      +++ +V  L A +    + +   +H
Sbjct: 390 AHKSLGVFCNMLSYGTRPDAIALVKILAASSELGIVQQALCLH 432


>ref|XP_003525738.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At3g01580-like [Glycine max]
          Length = 701

 Score =  133 bits (335), Expect = 1e-29
 Identities = 63/105 (60%), Positives = 79/105 (75%)
 Frame = -3

Query: 316 VHGFVIRMGFNTCLSLVNSLLNMYAKTGSVDNARKLFGLMDEKDIVSWSSMIGCYTQNGK 137
           VHGFV R GF+T L L NS+LN+Y KTGS+  A  LF  M  KDI+SWSSM+ CY  NG 
Sbjct: 228 VHGFVKRRGFDTKLCLANSILNLYGKTGSIRIAANLFREMPYKDIISWSSMVACYADNGA 287

Query: 136 TTEALGLFNEMVEKRVEFNSVTVVSALQACAVACNISEGRRIHEL 2
            T AL LFNEM++KR+E N VTV+SAL+ACA + N+ EG++IH+L
Sbjct: 288 ETNALNLFNEMIDKRIELNRVTVISALRACASSSNLEEGKQIHKL 332



 Score = 72.4 bits (176), Expect = 4e-11
 Identities = 42/100 (42%), Positives = 60/100 (60%), Gaps = 1/100 (1%)
 Frame = -3

Query: 316 VHGFVIRMGFNTCLSLVNSLLNMYAKTGSVDNARKLFGLMDEKDIVSWSSMIGCYTQNGK 137
           +H FV + GF+    +  SL+ +YAK  S+DNA K+F  +   D+V+WSS+I  Y  +G+
Sbjct: 430 LHAFVTKSGFDNNEFIGASLIELYAKCSSIDNANKVFKGLRHTDVVTWSSIIAAYGFHGQ 489

Query: 136 TTEALGLFNEMV-EKRVEFNSVTVVSALQACAVACNISEG 20
             EAL L ++M     V+ N VT VS L AC+ A  I EG
Sbjct: 490 GEEALKLSHQMSNHSDVKPNDVTFVSILSACSHAGLIEEG 529



 Score = 65.1 bits (157), Expect = 6e-09
 Identities = 36/104 (34%), Positives = 64/104 (61%), Gaps = 1/104 (0%)
 Frame = -3

Query: 316 VHGFVIRMGFNTCLSLVNSLLNMYAKTGSVDNARKLFGLMDEKDIVSWSSMIGCYTQNGK 137
           +HGF ++   ++ + + ++L+ +Y+K G +++A K+F    + D+V W+S+I  Y QNG 
Sbjct: 127 IHGF-LKKKIDSDMFVGSALIELYSKCGQMNDAVKVFTEYPKPDVVLWTSIITGYEQNGS 185

Query: 136 TTEALGLFNEMVE-KRVEFNSVTVVSALQACAVACNISEGRRIH 8
              AL  F+ MV  ++V  + VT+VSA  ACA   + + GR +H
Sbjct: 186 PELALAFFSRMVVLEQVSPDPVTLVSAASACAQLSDFNLGRSVH 229



 Score = 58.2 bits (139), Expect = 7e-07
 Identities = 28/103 (27%), Positives = 55/103 (53%)
 Frame = -3

Query: 316 VHGFVIRMGFNTCLSLVNSLLNMYAKTGSVDNARKLFGLMDEKDIVSWSSMIGCYTQNGK 137
           +H   +  GF   +++  +L++MY K  S +NA +LF  M +KD+VSW+ +   Y + G 
Sbjct: 329 IHKLAVNYGFELDITVSTALMDMYLKCFSPENAIELFNRMPKKDVVSWAVLFSGYAEIGM 388

Query: 136 TTEALGLFNEMVEKRVEFNSVTVVSALQACAVACNISEGRRIH 8
             ++LG+F  M+      +++ +V  L A +    + +   +H
Sbjct: 389 AHKSLGVFCNMLSNGTRPDAIALVKILAASSELGIVQQALCLH 431


>ref|XP_002272525.2| PREDICTED: putative pentatricopeptide repeat-containing protein
           At5g09950 [Vitis vinifera]
          Length = 1291

 Score =  129 bits (325), Expect = 2e-28
 Identities = 65/105 (61%), Positives = 78/105 (74%)
 Frame = -3

Query: 316 VHGFVIRMGFNTCLSLVNSLLNMYAKTGSVDNARKLFGLMDEKDIVSWSSMIGCYTQNGK 137
           VHG VIR  F+  L LVNSLLN+YAKTG    A  LF  M EKD++SWS+MI CY  N  
Sbjct: 228 VHGLVIRREFDGDLPLVNSLLNLYAKTGCEKIAANLFSKMPEKDVISWSTMIACYANNEA 287

Query: 136 TTEALGLFNEMVEKRVEFNSVTVVSALQACAVACNISEGRRIHEL 2
             EAL LF+EM+EKR E NSVTVVSALQACAV+ N+ EG++IH++
Sbjct: 288 ANEALNLFHEMIEKRFEPNSVTVVSALQACAVSRNLEEGKKIHKI 332



 Score = 82.8 bits (203), Expect = 3e-14
 Identities = 45/105 (42%), Positives = 70/105 (66%), Gaps = 1/105 (0%)
 Frame = -3

Query: 316 VHGFVIRMGFNTCLSLVNSLLNMYAKTGSVDNARKLFGLMDEKDIVSWSSMIGCYTQNGK 137
           +HG+V+R GFN+ + +  SL+ +Y+K GS+ +A KLF  M  +D+V WSSMI  Y  +G+
Sbjct: 430 LHGYVVRSGFNSNVFVGASLIELYSKCGSLGDAVKLFKGMIVRDVVIWSSMIAAYGIHGR 489

Query: 136 TTEALGLFNEMVE-KRVEFNSVTVVSALQACAVACNISEGRRIHE 5
             EAL +F++MV+   V  N+VT +S L AC+ A  + EG +I +
Sbjct: 490 GGEALEIFDQMVKNSTVRPNNVTFLSILSACSHAGLVEEGLKIFD 534



 Score = 72.8 bits (177), Expect = 3e-11
 Identities = 38/104 (36%), Positives = 62/104 (59%)
 Frame = -3

Query: 313  HGFVIRMGFNTCLSLVNSLLNMYAKTGSVDNARKLFGLMDEKDIVSWSSMIGCYTQNGKT 134
            H +VI+ GF   + +  ++++MY+K GS+D AR LF     KD+V WS+MI  Y  +G  
Sbjct: 942  HSYVIQTGFEFDILVATAIMDMYSKCGSLDLARCLFDETAGKDLVCWSAMIASYGIHGHG 1001

Query: 133  TEALGLFNEMVEKRVEFNSVTVVSALQACAVACNISEGRRIHEL 2
             +A+ LF++MV+  V  + VT    L AC+ +  + EG+   +L
Sbjct: 1002 RKAIDLFDQMVKAGVRPSHVTFTCVLSACSHSGLLEEGKMYFQL 1045



 Score = 68.9 bits (167), Expect = 4e-10
 Identities = 37/103 (35%), Positives = 58/103 (56%)
 Frame = -3

Query: 316  VHGFVIRMGFNTCLSLVNSLLNMYAKTGSVDNARKLFGLMDEKDIVSWSSMIGCYTQNGK 137
            +H  ++  G +  L +  +L++MYAK G ++ AR +F  M  +D+VSW+SMI  Y  NG 
Sbjct: 840  IHQHLVCCGCSNDLFVDAALVDMYAKCGDIEAARLVFDKMAVRDLVSWTSMISGYAHNGY 899

Query: 136  TTEALGLFNEMVEKRVEFNSVTVVSALQACAVACNISEGRRIH 8
             +E LG F+ M    V  N V+++S L AC     + +G   H
Sbjct: 900  NSETLGFFDLMRSSGVIPNRVSILSVLLACGNLGALRKGEWFH 942



 Score = 63.5 bits (153), Expect = 2e-08
 Identities = 37/107 (34%), Positives = 58/107 (54%), Gaps = 2/107 (1%)
 Frame = -3

Query: 316 VHGFVIRMG-FNTCLSLVNSLLNMYAKTGSVDNARKLFGLMDEKDIVSWSSMIGCYTQNG 140
           +HGF  +     + + + ++L+ +Y+K G +  A K+F      D V W+SM+  Y QN 
Sbjct: 125 IHGFAKKNDEIGSDMFVGSALVELYSKCGQMGEALKVFEEFQRPDTVLWTSMVTGYQQNN 184

Query: 139 KTTEALGLFNEMVEKR-VEFNSVTVVSALQACAVACNISEGRRIHEL 2
              EAL LF++MV    V  + VT+VS + ACA   N+  G  +H L
Sbjct: 185 DPEEALALFSQMVMMDCVVLDPVTLVSVVSACAQLLNVKAGSCVHGL 231



 Score = 61.6 bits (148), Expect = 6e-08
 Identities = 29/89 (32%), Positives = 50/89 (56%)
 Frame = -3

Query: 316 VHGFVIRMGFNTCLSLVNSLLNMYAKTGSVDNARKLFGLMDEKDIVSWSSMIGCYTQNGK 137
           +H   +  GF    S+  +L++MY K    D A  LF  + +KD+VSW +++  Y QNG 
Sbjct: 329 IHKIAVWKGFELDFSVSTALIDMYMKCSCPDEAVDLFQRLPKKDVVSWVALLSGYAQNGM 388

Query: 136 TTEALGLFNEMVEKRVEFNSVTVVSALQA 50
             +++G+F  M+   ++ ++V VV  L A
Sbjct: 389 AYKSMGVFRNMLSDGIQPDAVAVVKILAA 417


>ref|XP_003604673.1| hypothetical protein MTR_4g015760 [Medicago truncatula]
           gi|355505728|gb|AES86870.1| hypothetical protein
           MTR_4g015760 [Medicago truncatula]
          Length = 838

 Score =  126 bits (316), Expect = 2e-27
 Identities = 60/105 (57%), Positives = 76/105 (72%)
 Frame = -3

Query: 316 VHGFVIRMGFNTCLSLVNSLLNMYAKTGSVDNARKLFGLMDEKDIVSWSSMIGCYTQNGK 137
           VHGFV R G +  L L NSLL++Y KTGS+ NA  LF  M +KDI+SWS+M+ CY  NG 
Sbjct: 366 VHGFVKRKGLDNKLCLANSLLHLYGKTGSIKNASNLFREMSDKDIISWSTMVACYADNGA 425

Query: 136 TTEALGLFNEMVEKRVEFNSVTVVSALQACAVACNISEGRRIHEL 2
            T+ L LFNEM++KR++ N VTVVS L+ACA   N+ EG +IHEL
Sbjct: 426 ETDVLDLFNEMLDKRIKPNWVTVVSVLRACACISNLEEGMKIHEL 470



 Score = 73.6 bits (179), Expect = 2e-11
 Identities = 41/106 (38%), Positives = 64/106 (60%), Gaps = 1/106 (0%)
 Frame = -3

Query: 316 VHGFVIRMGFNTCLSLVNSLLNMYAKTGSVDNARKLFGLMDEKDIVSWSSMIGCYTQNGK 137
           +H FVI+ GF     +  SL+ +YAK  S+++A K+F  M  KD+V+WSS+I  Y  +G+
Sbjct: 568 LHAFVIKNGFENNQFIGASLIEVYAKCSSIEDANKVFKGMTYKDVVTWSSIIAAYGFHGQ 627

Query: 136 TTEALGLFNEMV-EKRVEFNSVTVVSALQACAVACNISEGRRIHEL 2
             EAL LF +M      + N+VT +S L AC+ +  I EG  + ++
Sbjct: 628 GEEALKLFYQMANHSDTKPNNVTFISILSACSHSGLIKEGINMFDI 673



 Score = 67.4 bits (163), Expect = 1e-09
 Identities = 35/104 (33%), Positives = 62/104 (59%), Gaps = 1/104 (0%)
 Frame = -3

Query: 316 VHGFVIRMGFNTCLSLVNSLLNMYAKTGSVDNARKLFGLMDEKDIVSWSSMIGCYTQNGK 137
           +HGF+ ++  +  + + ++L+++Y K G +++A K+F    + D+V W+S+I  Y Q+G 
Sbjct: 264 IHGFLKKVRIDGDMFVGSALIDLYTKCGQMNDAVKVFMEYPKPDVVLWTSIISGYEQSGS 323

Query: 136 TTEALGLFNEM-VEKRVEFNSVTVVSALQACAVACNISEGRRIH 8
              AL  F+ M V ++V  + VT+VS   ACA   N   GR +H
Sbjct: 324 PELALAFFSRMVVSEKVSPDPVTLVSVASACAQLSNFKLGRSVH 367


>ref|XP_002882172.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
           gi|297328012|gb|EFH58431.1| predicted protein
           [Arabidopsis lyrata subsp. lyrata]
          Length = 638

 Score =  120 bits (300), Expect = 2e-25
 Identities = 58/105 (55%), Positives = 75/105 (71%)
 Frame = -3

Query: 316 VHGFVIRMGFNTCLSLVNSLLNMYAKTGSVDNARKLFGLMDEKDIVSWSSMIGCYTQNGK 137
           VHGFV+R GF+  LSLVNSLLN YAK+ +   A  LF +M EKD++SWS++I CY QNG 
Sbjct: 166 VHGFVMRRGFSNDLSLVNSLLNCYAKSRAFKEAVNLFKMMAEKDVISWSTVIACYVQNGA 225

Query: 136 TTEALGLFNEMVEKRVEFNSVTVVSALQACAVACNISEGRRIHEL 2
             EAL +FNEM++   E N  TV+  LQACA A ++ +GR+ HEL
Sbjct: 226 AAEALRVFNEMIDDGTEPNVATVLCVLQACAAANDLEQGRKTHEL 270



 Score = 77.4 bits (189), Expect = 1e-12
 Identities = 46/105 (43%), Positives = 65/105 (61%), Gaps = 1/105 (0%)
 Frame = -3

Query: 313 HGFVIRMGFNTCLSLVNSLLNMYAKTGSVDNARKLFGLMDEKDIVSWSSMIGCYTQNGKT 134
           H +VI+ GF++   +  SL+ +Y++ GS+ NA K+F  +  KD V W+S+I  Y  +GK 
Sbjct: 370 HSYVIKYGFDSNPFIGASLVELYSRCGSLGNASKVFNEIALKDTVVWTSLITGYGIHGKG 429

Query: 133 TEALGLFNEMV-EKRVEFNSVTVVSALQACAVACNISEGRRIHEL 2
           T+AL  FN MV    V+ N VT +S L AC+ A  I EG RI EL
Sbjct: 430 TKALETFNHMVRSSEVKPNEVTFLSILSACSHAGLIHEGLRIFEL 474



 Score = 60.1 bits (144), Expect = 2e-07
 Identities = 33/105 (31%), Positives = 59/105 (56%), Gaps = 2/105 (1%)
 Frame = -3

Query: 316 VHGFVIR-MGFNTCLSLVNSLLNMYAKTGSVDNARKLFGLMDEKDIVSWSSMIGCYTQNG 140
           +HGF+ + +   + L + +SL+ MY K G +  A ++F  +++ DIV+WSSM+  + +NG
Sbjct: 63  IHGFLKKNVTLGSDLYVGSSLIYMYVKCGRMTEALRMFNELEKPDIVTWSSMVSGFEKNG 122

Query: 139 KTTEALGLFNEM-VEKRVEFNSVTVVSALQACAVACNISEGRRIH 8
              +A+  F  M     V  + VT+++ + AC    N   GR +H
Sbjct: 123 SPYQAVEFFRRMATASDVTPDRVTLITLVSACTKLSNSRLGRCVH 167