BLASTX nr result

ID: Coptis23_contig00033093 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00033093
         (710 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002525295.1| conserved hypothetical protein [Ricinus comm...   103   4e-20
ref|XP_002320664.1| predicted protein [Populus trichocarpa] gi|2...   102   1e-19
emb|CBI19378.3| unnamed protein product [Vitis vinifera]              101   1e-19
ref|XP_003524022.1| PREDICTED: uncharacterized protein LOC100785...    96   7e-18
gb|AFK39444.1| unknown [Lotus japonicus]                               95   2e-17

>ref|XP_002525295.1| conserved hypothetical protein [Ricinus communis]
           gi|223535453|gb|EEF37123.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 164

 Score =  103 bits (256), Expect = 4e-20
 Identities = 63/146 (43%), Positives = 94/146 (64%), Gaps = 9/146 (6%)
 Frame = +1

Query: 1   ESLFKRCVKAPFRVLGRTRDFYVRSVTDCSGRISRASVMGGAFGPVNIT-PRSFSVSSLR 177
           +S   + +K+P R+L + RDFYV+S+T+ S RI   + MG   G V  T P+S+SV+S +
Sbjct: 10  QSKISKFIKSPLRILLKARDFYVKSMTEYSDRIGYGTFMGCPTGHVVETLPKSYSVNSTK 69

Query: 178 SNN-DEDLKELIRAASQRGLREKLEMEIRQLQQLSKKSD------MLPWSFTVGIGRIDE 336
           S++ D+D +EL+RAAS RGL  + ++ + Q QQ  K  +       +P S +VGIGRIDE
Sbjct: 70  SSSRDDDYRELLRAASTRGLSSRNDLGVLQRQQSRKSPNNTRANISMPRSHSVGIGRIDE 129

Query: 337 EMP-SNFEESKVKPGLYPRRKSCAVS 411
           E    NF++ KVK  ++PR +S AVS
Sbjct: 130 EKACDNFDDIKVKTDVFPRSRSHAVS 155


>ref|XP_002320664.1| predicted protein [Populus trichocarpa] gi|222861437|gb|EEE98979.1|
           predicted protein [Populus trichocarpa]
          Length = 158

 Score =  102 bits (253), Expect = 1e-19
 Identities = 64/152 (42%), Positives = 89/152 (58%), Gaps = 13/152 (8%)
 Frame = +1

Query: 1   ESLFKRCVKAPFRVLGRTRDFYVRSVTDCSGRISRASVMGGAFGPVNITPRSFSVSSLRS 180
           ES  K+ +KAP R+L R RDFY++ + + S ++    VM    G  N  PRS+SVSS + 
Sbjct: 10  ESTLKKILKAPLRILARARDFYIKGMAEYSDQV---CVMSCPTGNFNTMPRSYSVSSTKP 66

Query: 181 NN-DEDLKELIRAASQR----GLREKLEMEIRQLQQLSKK------SDMLPWSFTVGIGR 327
           N+ D+D +E +RAAS R        K+ +++   QQ S K       D +P S TV IGR
Sbjct: 67  NHLDDDRREPLRAASTRSNLGSRNSKINVDVPARQQYSHKKSATRLGDNMPRSHTVAIGR 126

Query: 328 IDEEMPSNFEES--KVKPGLYPRRKSCAVSNK 417
           IDEE P +F+E   KVK  +YPR +S AVS +
Sbjct: 127 IDEEKPCDFDEEDVKVKTNVYPRSRSYAVSKR 158


>emb|CBI19378.3| unnamed protein product [Vitis vinifera]
          Length = 152

 Score =  101 bits (252), Expect = 1e-19
 Identities = 61/142 (42%), Positives = 86/142 (60%), Gaps = 3/142 (2%)
 Frame = +1

Query: 1   ESLFKRCVKAPFRVLGRTRDFYVRSVTDCSGRISRASVMGGAFGPVNITPRSFSVSSLRS 180
           ++ F R +  P RVL + RDFYVRS+TD + R+SR + MG     ++  P+SFSVSS RS
Sbjct: 8   QNRFMRIITIPIRVLSKARDFYVRSLTDAAERVSRGNAMGCPGVHISTLPKSFSVSSSRS 67

Query: 181 NNDEDLKELIRAASQRGLREKLEMEIRQLQQLSKKSDMLPWSFTVGIGRIDEEMPSNFEE 360
            + ED+  L R+ S      +++M +  LQ     S   P S +VG+GRIDE+ P +FEE
Sbjct: 68  GDGEDVGSLSRSGSASSSSNRVDMNV-FLQPPKMGSRAAPRSCSVGMGRIDEDRPCDFEE 126

Query: 361 S--KVKPG-LYPRRKSCAVSNK 417
               VK   LYPR +S AV+N+
Sbjct: 127 DSFNVKADFLYPRSRSYAVTNR 148


>ref|XP_003524022.1| PREDICTED: uncharacterized protein LOC100785988 [Glycine max]
          Length = 155

 Score = 95.9 bits (237), Expect = 7e-18
 Identities = 54/134 (40%), Positives = 85/134 (63%), Gaps = 5/134 (3%)
 Frame = +1

Query: 22  VKAPFRVLGRTRDFYVRSVTDCSGRISRASVMGGAFGPVNITPRSFSVSSLRSNNDEDLK 201
           +  P R+LG+ RD YVRS+T+C  +++ ++ +  A G     PRS+S ++ RS+N+ED  
Sbjct: 16  ITTPLRMLGKARDIYVRSITNCGHKMNYSNPVDAA-GRFQALPRSYSAATSRSDNNEDFA 74

Query: 202 ELIRAASQRGLREKLEMEI---RQLQQLSKKSDMLPWSFTVGIGRIDEEMPSNFEESKVK 372
           EL+RAAS R L  ++++++   +Q Q     S+ LP S +VG+GRIDE+ P +  E +V 
Sbjct: 75  ELLRAASARTLGNRIDVDLVLKQQAQARPVSSNGLPKSTSVGMGRIDEDTPYDLGEGEVP 134

Query: 373 --PGLYPRRKSCAV 408
             P  YPR +S AV
Sbjct: 135 VVPKAYPRSRSYAV 148


>gb|AFK39444.1| unknown [Lotus japonicus]
          Length = 165

 Score = 94.7 bits (234), Expect = 2e-17
 Identities = 62/155 (40%), Positives = 89/155 (57%), Gaps = 15/155 (9%)
 Frame = +1

Query: 1   ESLFKRCVKAPFRVLGRTRDFYVRSVTDCSGRISRASVMGGAFGPVNITPRSFSVSSLRS 180
           +S+F + + +PFR LGR RD YVRS+T C   +S  + M  A G  +   RS SV++ RS
Sbjct: 9   QSMFMKIMASPFRALGRARDAYVRSITTCGQSVSYGNPMDPA-GRFSSLSRSQSVATSRS 67

Query: 181 NNDEDLKELIRAASQRGLREKLEMEI----RQLQQLSK--------KSDMLPWSFTVGIG 324
            + +D  EL+RAAS R +  +++M++    +QLQQ  +        K   LP S +VG+G
Sbjct: 68  GDGDDYAELLRAASARTMVGRIDMDLILKQQQLQQQQQHRYHTEGPKGSKLPKSSSVGMG 127

Query: 325 RIDEEMPSNFEE---SKVKPGLYPRRKSCAVSNKN 420
            IDEE P +  E   + V P  YPR KS AV  +N
Sbjct: 128 GIDEETPYDTSEGGVAFVAPDSYPRSKSYAVGKRN 162


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