BLASTX nr result

ID: Coptis23_contig00033068 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00033068
         (421 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002314403.1| predicted protein [Populus trichocarpa] gi|2...    68   9e-10
emb|CBI26119.3| unnamed protein product [Vitis vinifera]               58   7e-07
ref|XP_003631978.1| PREDICTED: uncharacterized protein LOC100855...    55   5e-06
ref|XP_002312710.1| predicted protein [Populus trichocarpa] gi|2...    55   6e-06

>ref|XP_002314403.1| predicted protein [Populus trichocarpa] gi|222863443|gb|EEF00574.1|
           predicted protein [Populus trichocarpa]
          Length = 211

 Score = 67.8 bits (164), Expect = 9e-10
 Identities = 36/90 (40%), Positives = 59/90 (65%)
 Frame = +1

Query: 40  DSQSDEFLQKKQDTCSLVTVREHDQILAQSSDLCLGNSRGYPSAVDFAGKFRDNSFPRPA 219
           D+Q+++ + +K D     +V + D+ILAQSS++CL NS G P   +F+ +   ++  RP 
Sbjct: 117 DAQTNDLINEKGDP----SVHQPDEILAQSSEMCLNNSGGCPPLTNFSNQSPVDNILRP- 171

Query: 220 PSVETATMGKMRSRYLSTTYSYPGNSGKFL 309
              +TA++G +RS+YLS  YS+ GNSG+ L
Sbjct: 172 ---QTASVGMLRSKYLSKPYSFAGNSGQSL 198


>emb|CBI26119.3| unnamed protein product [Vitis vinifera]
          Length = 410

 Score = 58.2 bits (139), Expect = 7e-07
 Identities = 30/80 (37%), Positives = 49/80 (61%)
 Frame = +1

Query: 73  QDTCSLVTVREHDQILAQSSDLCLGNSRGYPSAVDFAGKFRDNSFPRPAPSVETATMGKM 252
           +DT  L +++  D++L QSS++ LG S G P A++F+ +   N+  RP      A +G +
Sbjct: 315 RDTHFLPSMQNPDKVLVQSSEVFLGKSEGCPPAMNFSNQVHVNNVLRP----HAAPVGTI 370

Query: 253 RSRYLSTTYSYPGNSGKFLI 312
           +S+YLS  YS+  NSG F +
Sbjct: 371 KSKYLSKPYSFASNSGNFYL 390


>ref|XP_003631978.1| PREDICTED: uncharacterized protein LOC100855402 [Vitis vinifera]
          Length = 339

 Score = 55.5 bits (132), Expect = 5e-06
 Identities = 29/76 (38%), Positives = 47/76 (61%)
 Frame = +1

Query: 73  QDTCSLVTVREHDQILAQSSDLCLGNSRGYPSAVDFAGKFRDNSFPRPAPSVETATMGKM 252
           +DT  L +++  D++L QSS++ LG S G P A++F+ +   N+  RP      A +G +
Sbjct: 252 RDTHFLPSMQNPDKVLVQSSEVFLGKSEGCPPAMNFSNQVHVNNVLRP----HAAPVGTI 307

Query: 253 RSRYLSTTYSYPGNSG 300
           +S+YLS  YS+  NSG
Sbjct: 308 KSKYLSKPYSFASNSG 323


>ref|XP_002312710.1| predicted protein [Populus trichocarpa] gi|222852530|gb|EEE90077.1|
           predicted protein [Populus trichocarpa]
          Length = 118

 Score = 55.1 bits (131), Expect = 6e-06
 Identities = 31/90 (34%), Positives = 53/90 (58%)
 Frame = +1

Query: 40  DSQSDEFLQKKQDTCSLVTVREHDQILAQSSDLCLGNSRGYPSAVDFAGKFRDNSFPRPA 219
           D+Q+D   ++K+D     +V + DQIL+QSS+ C+  S G P   +F+ +   ++   P 
Sbjct: 24  DAQTDGLTKEKRDP----SVHQPDQILSQSSETCVDKSGGCPPLTNFSNQCPVDNIQIP- 78

Query: 220 PSVETATMGKMRSRYLSTTYSYPGNSGKFL 309
              +TA++G +RS+YL   YS+ G  G+ L
Sbjct: 79  ---QTASIGMLRSKYLPKPYSFAGKPGQSL 105


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