BLASTX nr result

ID: Coptis23_contig00033062 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00033062
         (357 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002528591.1| ATP binding protein, putative [Ricinus commu...   139   2e-31
ref|XP_002283448.1| PREDICTED: PAN domain-containing protein At5...   134   1e-29
emb|CAN62313.1| hypothetical protein VITISV_018205 [Vitis vinifera]   134   1e-29
ref|XP_002311933.1| predicted protein [Populus trichocarpa] gi|2...   121   7e-26
gb|ABK95014.1| unknown [Populus trichocarpa]                          121   7e-26

>ref|XP_002528591.1| ATP binding protein, putative [Ricinus communis]
           gi|223531987|gb|EEF33799.1| ATP binding protein,
           putative [Ricinus communis]
          Length = 491

 Score =  139 bits (351), Expect = 2e-31
 Identities = 62/115 (53%), Positives = 84/115 (73%), Gaps = 1/115 (0%)
 Frame = -2

Query: 344 SLDACEDSCEKNCSCWGSVFNNVTGYCYKIDYPIQSLVSVGDENKIGYFKVRTVVEKKRY 165
           SL+ CE  C+ NCSCWG+V+NN +G+CY +DYPIQ++V VGDE+K+GYFK+    +KK+ 
Sbjct: 366 SLEECEGICQSNCSCWGAVYNNGSGFCYFVDYPIQTVVGVGDESKVGYFKMWKGKKKKKE 425

Query: 164 VGYVIGIGILVCAVLMFFAVAGFGALRIWNRRTRVNW-FVHDDGISPGPYRDLGS 3
           VG  IG+GIL  A+L+     GFG  R+W RR  V   F  ++G+SPGPY+DLGS
Sbjct: 426 VGVGIGVGILSGAILILIGAIGFGVFRMWKRRRGVKGIFEEENGVSPGPYKDLGS 480


>ref|XP_002283448.1| PREDICTED: PAN domain-containing protein At5g03700 [Vitis vinifera]
           gi|297740069|emb|CBI30251.3| unnamed protein product
           [Vitis vinifera]
          Length = 485

 Score =  134 bits (336), Expect = 1e-29
 Identities = 58/118 (49%), Positives = 79/118 (66%)
 Frame = -2

Query: 356 EQMDSLDACEDSCEKNCSCWGSVFNNVTGYCYKIDYPIQSLVSVGDENKIGYFKVRTVVE 177
           E   SL+ CE SCE NCSCWGSV+NN +G+CY++DYPI++L+ VGD+ K+GYFKVR   +
Sbjct: 359 ETTSSLEQCERSCENNCSCWGSVYNNASGFCYRVDYPIRTLLGVGDDTKVGYFKVREGPQ 418

Query: 176 KKRYVGYVIGIGILVCAVLMFFAVAGFGALRIWNRRTRVNWFVHDDGISPGPYRDLGS 3
           KK   G+   IG+L   VL F  V GFG  ++W R+          G++PGPY+ LG+
Sbjct: 419 KKAESGFGFVIGLLGATVLAFGGVVGFGVYKVWRRKGAKGVSEEAGGVNPGPYKTLGA 476


>emb|CAN62313.1| hypothetical protein VITISV_018205 [Vitis vinifera]
          Length = 490

 Score =  134 bits (336), Expect = 1e-29
 Identities = 58/118 (49%), Positives = 79/118 (66%)
 Frame = -2

Query: 356 EQMDSLDACEDSCEKNCSCWGSVFNNVTGYCYKIDYPIQSLVSVGDENKIGYFKVRTVVE 177
           E   SL+ CE SCE NCSCWGSV+NN +G+CY++DYPI++L+ VGD+ K+GYFKVR   +
Sbjct: 359 ETTSSLEQCERSCENNCSCWGSVYNNASGFCYRVDYPIRTLLGVGDDTKVGYFKVREGPQ 418

Query: 176 KKRYVGYVIGIGILVCAVLMFFAVAGFGALRIWNRRTRVNWFVHDDGISPGPYRDLGS 3
           KK   G+   IG+L   VL F  V GFG  ++W R+          G++PGPY+ LG+
Sbjct: 419 KKAESGFGFVIGLLGATVLAFGGVVGFGVYKVWRRKGAKGVSEEAGGVNPGPYKTLGA 476


>ref|XP_002311933.1| predicted protein [Populus trichocarpa] gi|222851753|gb|EEE89300.1|
           predicted protein [Populus trichocarpa]
          Length = 487

 Score =  121 bits (303), Expect = 7e-26
 Identities = 57/117 (48%), Positives = 84/117 (71%), Gaps = 3/117 (2%)
 Frame = -2

Query: 344 SLDACEDSCEKNCSCWGSVFNNVTGYCYKIDYPIQSLVSVGDENKIGYFKVRTVVEKKRY 165
           S++ CE SC++NCSCWG+V+NN TG+CY ++YPIQ+LV VGDE+K+GYFKVRT  ++  +
Sbjct: 364 SVEECELSCQRNCSCWGAVYNNATGFCYPLNYPIQTLVGVGDESKVGYFKVRT--KRSWH 421

Query: 164 VGYVIGIGILVCAVLMFFAVA-GFGALRIWNRRTRVNWFVHDD--GISPGPYRDLGS 3
               +GI +L   +++   V  G+G  +IWNRR R    V ++   +SPGPY++LGS
Sbjct: 422 KKMKVGIRVLGAVIVVLTGVVLGYGGYKIWNRRRRGPKRVLEEKTEVSPGPYKNLGS 478


>gb|ABK95014.1| unknown [Populus trichocarpa]
          Length = 487

 Score =  121 bits (303), Expect = 7e-26
 Identities = 57/117 (48%), Positives = 84/117 (71%), Gaps = 3/117 (2%)
 Frame = -2

Query: 344 SLDACEDSCEKNCSCWGSVFNNVTGYCYKIDYPIQSLVSVGDENKIGYFKVRTVVEKKRY 165
           S++ CE SC++NCSCWG+V+NN TG+CY ++YPIQ+LV VGDE+K+GYFKVRT  ++  +
Sbjct: 364 SVEECELSCQRNCSCWGAVYNNATGFCYTLNYPIQTLVGVGDESKVGYFKVRT--KRSWH 421

Query: 164 VGYVIGIGILVCAVLMFFAVA-GFGALRIWNRRTRVNWFVHDD--GISPGPYRDLGS 3
               +GI +L   +++   V  G+G  +IWNRR R    V ++   +SPGPY++LGS
Sbjct: 422 KKIKVGIRVLGAVIVVLTGVVLGYGGYKIWNRRRRGPKRVLEEKTEVSPGPYKNLGS 478


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