BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00033052
         (260 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|EEC71559.1| hypothetical protein OsI_03915 [Oryza sativa Indi...    57   2e-06
ref|NP_001044395.1| Os01g0772800 [Oryza sativa Japonica Group] g...    57   2e-06
ref|XP_003545781.1| PREDICTED: signal recognition particle 54 kD...    55   6e-06
ref|XP_003543686.1| PREDICTED: signal recognition particle 54 kD...    55   6e-06
tpg|DAA57410.1| TPA: hypothetical protein ZEAMMB73_937725 [Zea m...    55   8e-06

>gb|EEC71559.1| hypothetical protein OsI_03915 [Oryza sativa Indica Group]
          Length = 496

 Score = 57.0 bits (136), Expect = 2e-06
 Identities = 24/41 (58%), Positives = 33/41 (80%)
 Frame = +2

Query: 29  NMSTNEMSRMIPPEILRQIGGAGALQNLMKQMDPSKMGGMF 151
           NM+   MS+++PP++L+QIGG G LQ+LMKQM   +MGGMF
Sbjct: 449 NMNVQHMSKVLPPQMLKQIGGMGGLQSLMKQMGSKEMGGMF 489


>ref|NP_001044395.1| Os01g0772800 [Oryza sativa Japonica Group]
           gi|20160917|dbj|BAB89854.1| putative signal recognition
           particle 54kD protein [Oryza sativa Japonica Group]
           gi|21743252|dbj|BAC03250.1| putative signal recognition
           particle 54kD protein [Oryza sativa Japonica Group]
           gi|32879776|dbj|BAC79360.1| signal recognition particle
           54kDa subunit [Oryza sativa Japonica Group]
           gi|113533926|dbj|BAF06309.1| Os01g0772800 [Oryza sativa
           Japonica Group] gi|215767979|dbj|BAH00208.1| unnamed
           protein product [Oryza sativa Japonica Group]
           gi|222619331|gb|EEE55463.1| hypothetical protein
           OsJ_03626 [Oryza sativa Japonica Group]
          Length = 496

 Score = 57.0 bits (136), Expect = 2e-06
 Identities = 24/41 (58%), Positives = 33/41 (80%)
 Frame = +2

Query: 29  NMSTNEMSRMIPPEILRQIGGAGALQNLMKQMDPSKMGGMF 151
           NM+   MS+++PP++L+QIGG G LQ+LMKQM   +MGGMF
Sbjct: 449 NMNVQHMSKVLPPQMLKQIGGMGGLQSLMKQMGSKEMGGMF 489


>ref|XP_003545781.1| PREDICTED: signal recognition particle 54 kDa protein 2-like
           [Glycine max]
          Length = 499

 Score = 55.1 bits (131), Expect = 6e-06
 Identities = 26/45 (57%), Positives = 34/45 (75%), Gaps = 4/45 (8%)
 Frame = +2

Query: 29  NMSTNEMSRMIPPEILRQIGGAGALQNLMKQMDPSK----MGGMF 151
           NM+   MS+++PP++L+QIGG G LQNLMKQM  +K    MGGMF
Sbjct: 449 NMNAQHMSKVLPPQMLKQIGGMGGLQNLMKQMGSAKDMMGMGGMF 493


>ref|XP_003543686.1| PREDICTED: signal recognition particle 54 kDa protein 2-like
           [Glycine max]
          Length = 500

 Score = 55.1 bits (131), Expect = 6e-06
 Identities = 26/45 (57%), Positives = 34/45 (75%), Gaps = 4/45 (8%)
 Frame = +2

Query: 29  NMSTNEMSRMIPPEILRQIGGAGALQNLMKQMDPSK----MGGMF 151
           NM+   MS+++PP++L+QIGG G LQNLMKQM  +K    MGGMF
Sbjct: 449 NMNAQHMSKVLPPQMLKQIGGMGGLQNLMKQMGSAKDMMGMGGMF 493


>tpg|DAA57410.1| TPA: hypothetical protein ZEAMMB73_937725 [Zea mays]
          Length = 472

 Score = 54.7 bits (130), Expect = 8e-06
 Identities = 23/41 (56%), Positives = 32/41 (78%)
 Frame = +2

Query: 29  NMSTNEMSRMIPPEILRQIGGAGALQNLMKQMDPSKMGGMF 151
           NM+  +MS+ +PP++L+QIGG G LQ+LMKQM   +M GMF
Sbjct: 427 NMNVQQMSKALPPQMLKQIGGMGGLQSLMKQMGSKEMSGMF 467