BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00033049
         (296 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002322464.1| predicted protein [Populus trichocarpa] gi|2...    71   1e-10
ref|XP_002263340.2| PREDICTED: flap endonuclease GEN-like 2-like...    64   1e-08
ref|NP_190459.2| Flap endonuclease GEN-like 2 [Arabidopsis thali...    63   3e-08
ref|NP_001118795.1| Flap endonuclease GEN-like 2 [Arabidopsis th...    63   3e-08
ref|XP_002510805.1| conserved hypothetical protein [Ricinus comm...    62   5e-08

>ref|XP_002322464.1| predicted protein [Populus trichocarpa] gi|222869460|gb|EEF06591.1|
           predicted protein [Populus trichocarpa]
          Length = 541

 Score = 70.9 bits (172), Expect = 1e-10
 Identities = 39/75 (52%), Positives = 45/75 (60%)
 Frame = +1

Query: 67  RVLVHHPFRRSELQKLCSQFSGWPSEKTKKTTNYACAYLVGVIYNCFWGADEYILPKISE 246
           RVL  HPF+R +LQ +C+QF GWP EKT                      DEY LPKI+E
Sbjct: 310 RVLSQHPFQRLKLQGICAQFFGWPPEKT----------------------DEYTLPKIAE 347

Query: 247 RDLRRFAILQSTSSE 291
           RDLRRFA L+STSSE
Sbjct: 348 RDLRRFANLRSTSSE 362


>ref|XP_002263340.2| PREDICTED: flap endonuclease GEN-like 2-like [Vitis vinifera]
           gi|297741051|emb|CBI31782.3| unnamed protein product
           [Vitis vinifera]
          Length = 565

 Score = 63.9 bits (154), Expect = 1e-08
 Identities = 37/76 (48%), Positives = 43/76 (56%)
 Frame = +1

Query: 61  VSRVLVHHPFRRSELQKLCSQFSGWPSEKTKKTTNYACAYLVGVIYNCFWGADEYILPKI 240
           V R L   PF+R+E QK+C+Q   WP EKT                      DEYILPKI
Sbjct: 311 VHRALALLPFQRTEAQKICAQLFEWPPEKT----------------------DEYILPKI 348

Query: 241 SERDLRRFAILQSTSS 288
           +ERDLRRFA L+STSS
Sbjct: 349 AERDLRRFANLRSTSS 364


>ref|NP_190459.2| Flap endonuclease GEN-like 2 [Arabidopsis thaliana]
           gi|332644950|gb|AEE78471.1| Flap endonuclease GEN-like 2
           [Arabidopsis thaliana]
          Length = 536

 Score = 62.8 bits (151), Expect = 3e-08
 Identities = 35/77 (45%), Positives = 44/77 (57%)
 Frame = +1

Query: 61  VSRVLVHHPFRRSELQKLCSQFSGWPSEKTKKTTNYACAYLVGVIYNCFWGADEYILPKI 240
           VSR L    F+R++LQ++C QF  WP EKT                      DEYILPK+
Sbjct: 247 VSRALAEFSFQRTKLQEICHQFFEWPPEKT----------------------DEYILPKV 284

Query: 241 SERDLRRFAILQSTSSE 291
           +ER+LRRFA LQS S+E
Sbjct: 285 AERNLRRFANLQSRSTE 301


>ref|NP_001118795.1| Flap endonuclease GEN-like 2 [Arabidopsis thaliana]
           gi|166221584|sp|Q9M2Z3.2|GENL2_ARATH RecName: Full=Flap
           endonuclease GEN-like 2 gi|332644951|gb|AEE78472.1| Flap
           endonuclease GEN-like 2 [Arabidopsis thaliana]
          Length = 600

 Score = 62.8 bits (151), Expect = 3e-08
 Identities = 35/77 (45%), Positives = 44/77 (57%)
 Frame = +1

Query: 61  VSRVLVHHPFRRSELQKLCSQFSGWPSEKTKKTTNYACAYLVGVIYNCFWGADEYILPKI 240
           VSR L    F+R++LQ++C QF  WP EKT                      DEYILPK+
Sbjct: 311 VSRALAEFSFQRTKLQEICHQFFEWPPEKT----------------------DEYILPKV 348

Query: 241 SERDLRRFAILQSTSSE 291
           +ER+LRRFA LQS S+E
Sbjct: 349 AERNLRRFANLQSRSTE 365


>ref|XP_002510805.1| conserved hypothetical protein [Ricinus communis]
           gi|223549920|gb|EEF51407.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 586

 Score = 62.0 bits (149), Expect = 5e-08
 Identities = 36/77 (46%), Positives = 46/77 (59%)
 Frame = +1

Query: 61  VSRVLVHHPFRRSELQKLCSQFSGWPSEKTKKTTNYACAYLVGVIYNCFWGADEYILPKI 240
           V RVL   PF+ ++LQ+LC++F GW SE T                      DEYILPKI
Sbjct: 307 VYRVLAQPPFQCAKLQQLCARFFGWSSEIT----------------------DEYILPKI 344

Query: 241 SERDLRRFAILQSTSSE 291
           +ERDLRRF+ L+STSS+
Sbjct: 345 AERDLRRFSNLRSTSSK 361